Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 527-804 |
| Cow position: | chr29:4668791-4669072 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 560-791 |
| Cow position: | chr29:27060540-27060305 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 561-695 |
| Cow position: | chr29:33557664-33557529 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 561-800 |
| Cow position: | chr29:13386660-13386899 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 562-800 |
| Cow position: | chr29:20673103-20672870 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 562-801 |
| Cow position: | chr29:13561912-13562155 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 565-741 |
| Cow position: | chr29:38865722-38865546 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 566-798 |
| Cow position: | chr29:37996758-37996520 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 567-797 |
| Cow position: | chr29:26738032-26737800 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 567-802 |
| Cow position: | chr29:4245169-4245407 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 568-802 |
| Cow position: | chr29:45619845-45620078 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 572-721 |
| Cow position: | chr29:36478412-36478258 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 572-747 |
| Cow position: | chr29:32149332-32149156 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 572-802 |
| Cow position: | chr29:44021902-44022140 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 574-800 |
| Cow position: | chr29:3840912-3841135 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 576-779 |
| Cow position: | chr29:24311993-24311786 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 599-800 |
| Cow position: | chr29:29783859-29783649 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 611-800 |
| Cow position: | chr29:32939777-32939583 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 639-793 |
| Cow position: | chr29:27058514-27058669 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 648-799 |
| Cow position: | chr29:1627715-1627564 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 123, 138 |
| Conread position: | 651-800 |
| Cow position: | chr29:1541962-1542116 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 667-803 |
| Cow position: | chr29:16336086-16336222 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 687-800 |
| Cow position: | chr29:44696748-44696636 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.