Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 549-800 |
| Cow position: | chr3:19229890-19230132 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 556-802 |
| Cow position: | chr3:37256258-37256013 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 560-785 |
| Cow position: | chr3:22699497-22699722 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 560-795 |
| Cow position: | chr3:61463059-61462821 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 561-764 |
| Cow position: | chr3:75077258-75077061 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 562-756 |
| Cow position: | chr3:5052137-5052333 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 566-802 |
| Cow position: | chr3:3643699-3643460 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 566-802 |
| Cow position: | chr3:19247163-19247395 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 8 |
| Conread position: | 566-802 |
| Cow position: | chr3:36416185-36415943 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 567-759 |
| Cow position: | chr3:74797574-74797379 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 567-800 |
| Cow position: | chr3:14185237-14185473 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 567-803 |
| Cow position: | chr3:23938651-23938408 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 568-724 |
| Cow position: | chr3:33568194-33568037 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 568-760 |
| Cow position: | chr3:2682934-2682746 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 568-760 |
| Cow position: | chr3:68544337-68544147 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 568-801 |
| Cow position: | chr3:63270649-63270879 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 144 |
| Conread position: | 568-802 |
| Cow position: | chr3:4127095-4126864 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 568-802 |
| Cow position: | chr3:7837711-7837484 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 568-802 |
| Cow position: | chr3:19236255-19236493 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 568-802 |
| Cow position: | chr3:28926409-28926190 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 571-745 |
| Cow position: | chr3:45839449-45839625 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 571-796 |
| Cow position: | chr3:69220413-69220193 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 571-798 |
| Cow position: | chr3:52026817-52026591 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 571-802 |
| Cow position: | chr3:7865117-7865348 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 578-713 |
| Cow position: | chr3:34443142-34443008 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 579-800 |
| Cow position: | chr3:22702858-22703073 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 586-746 |
| Cow position: | chr3:9255226-9255388 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 591-802 |
| Cow position: | chr3:26586413-26586206 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 659-771 |
| Cow position: | chr3:36543914-36543802 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 686-802 |
| Cow position: | chr3:58594563-58594680 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.