Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 558-712 |
| Cow position: | chr5:69735863-69735716 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 566-766 |
| Cow position: | chr5:40699067-40699274 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 568-760 |
| Cow position: | chr5:31568111-31568308 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 568-771 |
| Cow position: | chr5:2186986-2187190 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 568-796 |
| Cow position: | chr5:27990542-27990770 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 191, 64 |
| Conread position: | 568-802 |
| Cow position: | chr5:17043974-17044208 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 568-802 |
| Cow position: | chr5:46862210-46862445 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 571-785 |
| Cow position: | chr5:18777750-18777966 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 571-802 |
| Cow position: | chr5:8763798-8763566 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 571-802 |
| Cow position: | chr5:47996956-47997188 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 175 |
| Conread position: | 575-802 |
| Cow position: | chr5:22846918-22847146 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 204 |
| Conread position: | 576-775 |
| Cow position: | chr5:67964769-67964569 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 576-800 |
| Cow position: | chr5:44888415-44888186 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 579-721 |
| Cow position: | chr5:33715197-33715343 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 596-800 |
| Cow position: | chr5:68391767-68391561 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 158 |
| Conread position: | 599-795 |
| Cow position: | chr5:43659591-43659785 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 626-796 |
| Cow position: | chr5:56633624-56633457 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 649-802 |
| Cow position: | chr5:19004262-19004414 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 650-802 |
| Cow position: | chr5:12785106-12785258 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 662-800 |
| Cow position: | chr5:47960483-47960612 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 662-802 |
| Cow position: | chr5:24887056-24886915 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 662-802 |
| Cow position: | chr5:24893493-24893353 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 107, 74 |
Show alignments to all cow chromosomes.