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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-39K03.5
        

               
Conread position:
               
1-142
               

               
Cow position:
               
chr11:18574679-18574821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr11:17369701-17369561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr11:46314188-46314032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr11:33369327-33369171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr11:35732908-35733070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr11:26057472-26057638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr11:63407869-63407708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr11:68570206-68570370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr11:19147967-19148130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr11:44176768-44176602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr11:63849775-63849946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr11:26442328-26442500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:40538724-40538552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 66
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:41278362-41278187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:44620128-44619956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:70600652-70600827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:3714997-3714821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:23271831-23272003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:53817030-53816853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:7500924-7500748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:23220535-23220362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:33374141-33373965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:81065875-81066050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:6319956-6320134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:13940362-13940183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:30322319-30322494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:60720279-60720457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:6581009-6580830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:25968678-25968853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 140
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:66041447-66041276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:79548758-79548941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr11:7571795-7571618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr11:36300409-36300584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr11:80586441-80586267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:45350335-45350521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:64781263-64781077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:12555129-12555316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:15366803-15366983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:25604128-25603937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:36521055-36520864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:47412017-47411831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:51846472-51846287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:60296913-60296720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:66939416-66939603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:87171901-87172087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr11:25620215-25620409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:21830036-21830223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:27502528-27502715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:37099997-37100182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:42016464-42016652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:42084498-42084689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:74427854-74427664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:77017405-77017228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:81041787-81041983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr11:42498019-42497828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
178, 146
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr11:17517574-17517378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr11:69168763-69168563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:2084320-2084119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:30721275-30721074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:31537273-31537464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:32254041-32254241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:37804377-37804578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:40792518-40792731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:53773858-53773657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:56311425-56311620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:70483676-70483876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:81167856-81168051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr11:6245496-6245293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr11:17559290-17559105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr11:19591821-19592018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr11:56288720-56288520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
175, 151
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:1380852-1380648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:6642989-6642786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:21508186-21507975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:36914390-36914594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:40516940-40517143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr11:70458219-70458012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr11:78820324-78820123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr11:54428795-54428590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr11:6395928-6395722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr11:16315049-16314838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr11:29308757-29308546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr11:31024626-31024841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr11:69417578-69417370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr11:8670192-8669976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr11:30209648-30209854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr11:45619525-45619318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:7874315-7874103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:13592914-13592700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:17889552-17889766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:19247030-19247234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:25791518-25791729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:30708680-30708471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:42884610-42884821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 96
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:45742546-45742342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:47310809-47311019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 179
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:49153115-49152914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:52690350-52690555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:54741904-54742116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:55334094-55333874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:62811471-62811262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:64029092-64029298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:68913318-68913105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:78380894-78381096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:83398082-83397870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:84385465-84385672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:1485059-1485263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:8496208-8495995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 103
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:39462794-39462586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
198, 76
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:55744644-55744430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:59024178-59024397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:59862385-59862170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:70756649-70756445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 57
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr11:7385609-7385400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr11:34968438-34968659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr11:30165686-30165467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr11:35351858-35352087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 186
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr11:70422420-70422646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr11:1980090-1980347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 240
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr11:81175772-81175616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr11:38223619-38223778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr11:62102272-62102442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr11:74152575-74152750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr11:36092745-36092917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr11:58186046-58185882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr11:79466396-79466211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr11:85186354-85186528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:17721627-17721803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:30192352-30192177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:30986810-30986640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:48544610-48544436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:52297049-52297222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:57767363-57767189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:63485106-63484936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:63498957-63499128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:63998916-63999093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:77241876-77241704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:83043193-83043364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr11:18924921-18924743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr11:49210643-49210824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr11:49396352-49396535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr11:18119676-18119491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr11:68326688-68326877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr11:77758587-77758774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr11:86895546-86895363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr11:49872713-49872907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr11:70206489-70206298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr11:70978561-70978757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:22676286-22676091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:32782700-32782908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:41215907-41215708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:47784954-47784750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:66572318-66572521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 168
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr11:67600952-67600760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr11:1932314-1932517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr11:27907944-27907755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:20205684-20205879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:21886004-21885806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:30172473-30172282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:35212997-35213195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:62789301-62789103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr11:67312959-67312753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr11:28078663-28078469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr11:39060431-39060636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:6233704-6233915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:9270564-9270760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:13500184-13499982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:15772539-15772747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:17859979-17860191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:29786319-29786534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:35109366-35109573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:39250138-39249937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:41313488-41313692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:42067038-42066826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:46427233-46427444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:46999160-46998945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 164
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:63919893-63920089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:65607517-65607727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr11:72375492-72375718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr11:75285582-75285805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 221
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr11:46922713-46922929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr11:19946595-19946391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr11:15369563-15369341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr11:80412835-80413060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 170
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr11:32398815-32398587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr11:65826580-65826799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr11:80370287-80370114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr11:49149219-49149046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr11:79666089-79666264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr11:62620549-62620364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr11:20234859-20234671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr11:57503653-57503469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr11:66099684-66099881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr11:49207884-49207691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr11:35347578-35347776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr11:41213225-41213018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr11:28675250-28675049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr11:43914466-43914264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr11:67614752-67614951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr11:51729447-51729251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr11:77013943-77013749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr11:70951040-70950833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
203, 63
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr11:47837492-47837271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr11:10956701-10956921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr11:43641560-43641408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr11:26343274-26343101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr11:84228551-84228718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr11:75749637-75749477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr11:65495172-65495347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr11:48672886-48672704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr11:12080015-12079826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr11:17676203-17676383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr11:46884547-46884363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr11:47110428-47110242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 166
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr11:5176209-5176389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr11:21173265-21173455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr11:27913458-27913264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr11:38334693-38334502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr11:25783887-25783690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr11:3740136-3739929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr11:5218993-5219184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
191, 63
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr11:9237676-9237871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr11:13863930-13864130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr11:34644830-34644630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr11:1067266-1067467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:8988058-8988265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:13042976-13043181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:17831035-17831256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 184
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:18699042-18698842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:29677379-29677167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:48474881-48474668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:48660102-48659899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:53778792-53778581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:57608294-57608491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:58173807-58173590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:62889720-62889929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:66188149-66188352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr11:84890556-84890752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr11:34616433-34616221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr11:71854112-71854316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
202, 85
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr11:63382025-63382232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr11:77705922-77705711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr11:33348027-33348237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
210, 31
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr11:35724142-35723864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr11:32800798-32800639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr11:2836031-2835856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr11:5467252-5467079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr11:27760689-27760509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr11:35149573-35149390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr11:48315228-48315406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr11:6094233-6094413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr11:4637004-4637199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr11:77745078-77745281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr11:77319583-77319380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr11:53463113-53462907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 81
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr11:73353896-73354095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr11:20194253-20194463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr11:45872139-45872347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr11:71111069-71110854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr11:10095514-10095293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 82
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr11:6202627-6202392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr11:64409136-64408951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chr11:26535952-26535786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
8-191
               

               
Cow position:
               
chr11:9836287-9836471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
8-194
               

               
Cow position:
               
chr11:19549644-19549466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 20
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr11:4199442-4199249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr11:11994544-11994730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chr11:26632845-26633038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chr11:21843971-21844159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:15382327-15382538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:29659727-29659524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:39854854-39855049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:40395604-40395403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:44017152-44016939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:50472486-50472282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:55762025-55761833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr11:63435690-63435486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
8-224
               

               
Cow position:
               
chr11:68883888-68883672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
8-227
               

               
Cow position:
               
chr11:32436513-32436284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr11:62742480-62742697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 67
               

               
Conread position:
               
9-138
               

               
Cow position:
               
chr11:38657015-38657145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
9-143
               

               
Cow position:
               
chr11:2281156-2281291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr11:62812786-62812959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr11:60486249-60486429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chr11:63065819-63065631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
9-213
               

               
Cow position:
               
chr11:46747692-46747897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
10-179
               

               
Cow position:
               
chr11:81406001-81406171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr11:8683912-8684111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr11:41985882-41986081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr11:12076919-12077123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr11:36981731-36981526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr11:67911997-67912186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr11:42189293-42189472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr11:18508865-18509055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr11:31875258-31875068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr11:81849052-81848860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
12-213
               

               
Cow position:
               
chr11:76653185-76652982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr11:78544449-78544229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
13-185
               

               
Cow position:
               
chr11:31228120-31227954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr11:18791900-18792081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr11:66325944-66326147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
14-179
               

               
Cow position:
               
chr11:63202085-63202252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr11:8544855-8545049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr11:33409103-33409289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
17-184
               

               
Cow position:
               
chr11:37435828-37435995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr11:19739235-19739423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
18-170
               

               
Cow position:
               
chr11:17807803-17807956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr11:35665405-35665600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
20-210
               

               
Cow position:
               
chr11:75090061-75090253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
22-190
               

               
Cow position:
               
chr11:35140064-35139894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
22-201
               

               
Cow position:
               
chr11:87155675-87155496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
22-204
               

               
Cow position:
               
chr11:83357550-83357368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr11:30370256-30370075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
23-212
               

               
Cow position:
               
chr11:34136394-34136208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
24-182
               

               
Cow position:
               
chr11:69624419-69624577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr11:26143942-26144132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
25-210
               

               
Cow position:
               
chr11:41549181-41549366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr11:36920425-36920613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
29-212
               

               
Cow position:
               
chr11:84977218-84977394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
31-179
               

               
Cow position:
               
chr11:29482287-29482438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
31-201
               

               
Cow position:
               
chr11:71868458-71868627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
31-202
               

               
Cow position:
               
chr11:40459255-40459082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr11:35669812-35669987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr11:35926763-35926940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr11:36112563-36112388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr11:53510356-53510535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr11:67804890-67804714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
31-213
               

               
Cow position:
               
chr11:19232805-19232989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
31-213
               

               
Cow position:
               
chr11:61675609-61675431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 37
               

               
Conread position:
               
36-214
               

               
Cow position:
               
chr11:34113402-34113227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr11:34692990-34692818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr11:56654694-56654520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
39-201
               

               
Cow position:
               
chr11:2344389-2344226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
39-201
               

               
Cow position:
               
chr11:40478714-40478877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
40-212
               

               
Cow position:
               
chr11:77546557-77546380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
41-182
               

               
Cow position:
               
chr11:81614377-81614519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
47-183
               

               
Cow position:
               
chr11:79869459-79869319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
47-184
               

               
Cow position:
               
chr11:61178482-61178350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
47-201
               

               
Cow position:
               
chr11:35536713-35536563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
47-201
               

               
Cow position:
               
chr11:38236382-38236227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
47-201
               

               
Cow position:
               
chr11:45849367-45849524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
47-212
               

               
Cow position:
               
chr11:7924463-7924624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
49-202
               

               
Cow position:
               
chr11:71934829-71934980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
49-210
               

               
Cow position:
               
chr11:76835496-76835658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
52-218
               

               
Cow position:
               
chr11:53717682-53717848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
53-212
               

               
Cow position:
               
chr11:48512287-48512129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
55-212
               

               
Cow position:
               
chr11:33345566-33345410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
59-180
               

               
Cow position:
               
chr11:37982461-37982581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-190
               

               
Cow position:
               
chr11:70517478-70517607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-201
               

               
Cow position:
               
chr11:62168215-62168355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-211
               

               
Cow position:
               
chr11:5789783-5789935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
147, 28
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:6633827-6633675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:7307749-7307596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:48650091-48649937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:58938630-58938780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:61958628-61958779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr11:70826065-70825913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr11:64351674-64351835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
60-187
               

               
Cow position:
               
chr11:48232942-48232817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
60-189
               

               
Cow position:
               
chr11:32615852-32615723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-190
               

               
Cow position:
               
chr11:71767717-71767588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
60-211
               

               
Cow position:
               
chr11:16906935-16907083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr11:33753795-33753940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr11:69307630-69307478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
62-178
               

               
Cow position:
               
chr11:59916261-59916144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
62-212
               

               
Cow position:
               
chr11:62778555-62778409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
63-201
               

               
Cow position:
               
chr11:68173645-68173507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-213
               

               
Cow position:
               
chr11:7460501-7460652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
64-212
               

               
Cow position:
               
chr11:36799196-36799342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
68-211
               

               
Cow position:
               
chr11:29946805-29946948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-212
               

               
Cow position:
               
chr11:61137069-61137210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
70-214
               

               
Cow position:
               
chr11:71501026-71501170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
70-224
               

               
Cow position:
               
chr11:69415493-69415643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
71-212
               

               
Cow position:
               
chr11:33311082-33310938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
76-212
               

               
Cow position:
               
chr11:20602327-20602190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
78-212
               

               
Cow position:
               
chr11:10127564-10127698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-212
               

               
Cow position:
               
chr11:18587497-18587631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-212
               

               
Cow position:
               
chr11:62155736-62155603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
78-212
               

               
Cow position:
               
chr11:62754219-62754354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
79-187
               

               
Cow position:
               
chr11:62728672-62728564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr11:377545-377677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr11:16320380-16320251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr11:21910530-21910662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-197
               

               
Cow position:
               
chr11:15682884-15683000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-195
               

               
Cow position:
               
chr11:1955799-1955907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
88-201
               

               
Cow position:
               
chr11:36987038-36986925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-212
               

               
Cow position:
               
chr11:33527141-33527016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
94-212
               

               
Cow position:
               
chr11:52983758-52983640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-212
               

               
Cow position:
               
chr11:34106594-34106705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-212
               

               
Cow position:
               
chr11:71482455-71482344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.