Cow genome map
| Conread name: | Ss1.1-Pig2-39K03.5 |
| Conread position: | 1-136 |
| Cow position: | chr5:44868573-44868441 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-142 |
| Cow position: | chr5:58487591-58487453 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-145 |
| Cow position: | chr5:56624296-56624442 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-151 |
| Cow position: | chr5:24108840-24108991 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-152 |
| Cow position: | chr5:55783743-55783895 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 1-155 |
| Cow position: | chr5:55949460-55949614 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 1-155 |
| Cow position: | chr5:56643286-56643132 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 87 |
| Conread position: | 1-155 |
| Cow position: | chr5:57447446-57447601 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-160 |
| Cow position: | chr5:15770234-15770395 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 1-161 |
| Cow position: | chr5:59662839-59662999 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 1-162 |
| Cow position: | chr5:35235469-35235631 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-170 |
| Cow position: | chr5:19052573-19052742 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 1-172 |
| Cow position: | chr5:34347515-34347686 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-172 |
| Cow position: | chr5:55162846-55162674 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:30492573-30492746 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 169 |
| Conread position: | 1-174 |
| Cow position: | chr5:45854719-45854537 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:51012218-51012043 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 1-177 |
| Cow position: | chr5:59335991-59335813 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-178 |
| Cow position: | chr5:43839779-43839957 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 1-178 |
| Cow position: | chr5:65140518-65140337 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 100 |
| Conread position: | 1-179 |
| Cow position: | chr5:18289336-18289167 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:28881464-28881651 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:29829669-29829848 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:35989980-35989804 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:43465745-43465566 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 1-179 |
| Cow position: | chr5:48061890-48062076 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 1-181 |
| Cow position: | chr5:14454262-14454080 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-182 |
| Cow position: | chr5:30221559-30221740 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-182 |
| Cow position: | chr5:31648633-31648460 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-182 |
| Cow position: | chr5:54127505-54127328 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-183 |
| Cow position: | chr5:19972784-19972967 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-183 |
| Cow position: | chr5:27084517-27084334 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-183 |
| Cow position: | chr5:29172209-29172024 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 1-184 |
| Cow position: | chr5:51800391-51800575 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 1-184 |
| Cow position: | chr5:64492494-64492310 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 1-185 |
| Cow position: | chr5:12562542-12562725 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 1-185 |
| Cow position: | chr5:54340984-54340804 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 1-185 |
| Cow position: | chr5:57755816-57755997 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 1-185 |
| Cow position: | chr5:71445610-71445425 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:73424459-73424646 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:32975340-32975520 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 1-187 |
| Cow position: | chr5:48154245-48154432 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 73 |
| Conread position: | 1-187 |
| Cow position: | chr5:57399033-57399219 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-187 |
| Cow position: | chr5:58519198-58519383 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 1-187 |
| Cow position: | chr5:58756186-58756373 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 1-187 |
| Cow position: | chr5:63172830-63173010 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-189 |
| Cow position: | chr5:17987675-17987862 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 74 |
| Conread position: | 1-189 |
| Cow position: | chr5:36370492-36370310 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-189 |
| Cow position: | chr5:46681505-46681688 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 1-190 |
| Cow position: | chr5:29256490-29256677 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 1-190 |
| Cow position: | chr5:47220710-47220518 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 1-190 |
| Cow position: | chr5:65760316-65760502 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 1-190 |
| Cow position: | chr5:71579675-71579493 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 1-193 |
| Cow position: | chr5:49920143-49919951 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 1-196 |
| Cow position: | chr5:742946-742755 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-198 |
| Cow position: | chr5:12902137-12901939 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-199 |
| Cow position: | chr5:46063712-46063518 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 1-201 |
| Cow position: | chr5:1247481-1247285 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 1-201 |
| Cow position: | chr5:5760091-5760294 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 131 |
| Conread position: | 1-201 |
| Cow position: | chr5:7057179-7057382 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 70, 143 |
| Conread position: | 1-201 |
| Cow position: | chr5:12300129-12299930 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 1-201 |
| Cow position: | chr5:20843180-20843376 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 1-201 |
| Cow position: | chr5:31475902-31475701 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 89 |
| Conread position: | 1-201 |
| Cow position: | chr5:63241197-63240996 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:64060664-64060465 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 1-201 |
| Cow position: | chr5:70749968-70750166 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 1-202 |
| Cow position: | chr5:35228926-35229120 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 1-202 |
| Cow position: | chr5:56059846-56060052 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-204 |
| Cow position: | chr5:7177370-7177167 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 1-204 |
| Cow position: | chr5:35208481-35208280 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 159 |
| Conread position: | 1-204 |
| Cow position: | chr5:36868955-36868753 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 1-204 |
| Cow position: | chr5:52001406-52001607 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 1-206 |
| Cow position: | chr5:39937334-39937130 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 1-206 |
| Cow position: | chr5:47756990-47756790 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-206 |
| Cow position: | chr5:55965674-55965880 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-207 |
| Cow position: | chr5:4226573-4226360 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 1-208 |
| Cow position: | chr5:23209177-23208969 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-208 |
| Cow position: | chr5:35459078-35459282 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 64 |
| Conread position: | 1-210 |
| Cow position: | chr5:28681298-28681508 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 78 |
| Conread position: | 1-211 |
| Cow position: | chr5:41935437-41935642 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 126 |
| Conread position: | 1-211 |
| Cow position: | chr5:61049552-61049341 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 72, 91 |
| Conread position: | 1-212 |
| Cow position: | chr5:2468995-2469199 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 1-212 |
| Cow position: | chr5:2827593-2827382 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 1-212 |
| Cow position: | chr5:7012631-7012839 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 107 |
| Conread position: | 1-212 |
| Cow position: | chr5:12760902-12761110 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 1-212 |
| Cow position: | chr5:15364489-15364277 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 1-212 |
| Cow position: | chr5:20128272-20128060 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-212 |
| Cow position: | chr5:20994871-20995084 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 1-212 |
| Cow position: | chr5:30562146-30561940 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-212 |
| Cow position: | chr5:42064425-42064213 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 1-212 |
| Cow position: | chr5:42845379-42845585 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 1-212 |
| Cow position: | chr5:44810019-44810231 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 1-212 |
| Cow position: | chr5:50101160-50101368 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 1-212 |
| Cow position: | chr5:55756195-55756412 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 1-212 |
| Cow position: | chr5:57767770-57767975 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 1-212 |
| Cow position: | chr5:59395882-59395664 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 89 |
| Conread position: | 1-212 |
| Cow position: | chr5:61784507-61784719 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 1-213 |
| Cow position: | chr5:58712-58926 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 1-213 |
| Cow position: | chr5:3772060-3771856 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 198, 65 |
| Conread position: | 1-213 |
| Cow position: | chr5:52853185-52852977 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 205, 76 |
| Conread position: | 1-213 |
| Cow position: | chr5:53055341-53055555 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 1-213 |
| Cow position: | chr5:61999338-61999551 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 1-217 |
| Cow position: | chr5:63187658-63187879 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 1-221 |
| Cow position: | chr5:18574400-18574175 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 1-222 |
| Cow position: | chr5:57062310-57062530 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 1-223 |
| Cow position: | chr5:37255115-37255339 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 1-225 |
| Cow position: | chr5:11562510-11562730 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 165, 15 |
| Conread position: | 1-226 |
| Cow position: | chr5:14903848-14904075 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 1-226 |
| Cow position: | chr5:50723266-50723037 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-226 |
| Cow position: | chr5:64140756-64140530 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 1-227 |
| Cow position: | chr5:56549586-56549355 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-228 |
| Cow position: | chr5:5856079-5855850 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 5, 217 |
| Conread position: | 1-228 |
| Cow position: | chr5:43604357-43604134 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 2-155 |
| Cow position: | chr5:54712851-54713000 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 2-158 |
| Cow position: | chr5:26149252-26149096 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 2-168 |
| Cow position: | chr5:34918560-34918398 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2-174 |
| Cow position: | chr5:57086845-57087017 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 2-179 |
| Cow position: | chr5:6876748-6876927 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 2-183 |
| Cow position: | chr5:20288041-20288226 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-184 |
| Cow position: | chr5:16185597-16185414 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:7675941-7676120 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:20127124-20126938 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 2-185 |
| Cow position: | chr5:40122391-40122575 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 89 |
| Conread position: | 2-185 |
| Cow position: | chr5:44734510-44734690 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:49821648-49821463 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-186 |
| Cow position: | chr5:60523944-60523769 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-187 |
| Cow position: | chr5:26894496-26894686 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-187 |
| Cow position: | chr5:56548783-56548605 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 135, 62 |
| Conread position: | 2-190 |
| Cow position: | chr5:19079460-19079282 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-190 |
| Cow position: | chr5:61580497-61580312 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 2-197 |
| Cow position: | chr5:44722296-44722489 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-197 |
| Cow position: | chr5:52723792-52723600 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 80, 165 |
| Conread position: | 2-198 |
| Cow position: | chr5:35190323-35190132 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-200 |
| Cow position: | chr5:43858201-43858399 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 2-200 |
| Cow position: | chr5:61914788-61914583 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-200 |
| Cow position: | chr5:66972647-66972449 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 2-201 |
| Cow position: | chr5:21829081-21828887 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-201 |
| Cow position: | chr5:26548926-26549121 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-201 |
| Cow position: | chr5:45845473-45845672 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 2-204 |
| Cow position: | chr5:56860660-56860463 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 2-204 |
| Cow position: | chr5:69383468-69383271 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-205 |
| Cow position: | chr5:22667287-22667087 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-207 |
| Cow position: | chr5:3492402-3492193 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 2-209 |
| Cow position: | chr5:7044489-7044694 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 68 |
| Conread position: | 2-211 |
| Cow position: | chr5:30253957-30253750 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 186, 55 |
| Conread position: | 2-211 |
| Cow position: | chr5:35969757-35969542 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 2-211 |
| Cow position: | chr5:41165299-41165097 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-211 |
| Cow position: | chr5:59626755-59626962 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 2-212 |
| Cow position: | chr5:2309341-2309548 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-212 |
| Cow position: | chr5:4267877-4267678 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-212 |
| Cow position: | chr5:4280661-4280454 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 190, 75 |
| Conread position: | 2-212 |
| Cow position: | chr5:5257070-5257280 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 2-212 |
| Cow position: | chr5:6443926-6444145 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 156 |
| Conread position: | 2-212 |
| Cow position: | chr5:12873969-12873759 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 2-212 |
| Cow position: | chr5:17828260-17828471 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 2-212 |
| Cow position: | chr5:30845323-30845121 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-212 |
| Cow position: | chr5:33273914-33273703 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 2-212 |
| Cow position: | chr5:34625165-34624967 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 156, 58 |
| Conread position: | 2-212 |
| Cow position: | chr5:39447308-39447527 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 2-212 |
| Cow position: | chr5:44796519-44796725 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-212 |
| Cow position: | chr5:44847810-44848016 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 183, 76 |
| Conread position: | 2-212 |
| Cow position: | chr5:53947116-53946905 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 2-212 |
| Cow position: | chr5:55068917-55068714 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-212 |
| Cow position: | chr5:60514808-60515020 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 2-212 |
| Cow position: | chr5:60948349-60948141 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 2-212 |
| Cow position: | chr5:67932249-67932458 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 191 |
| Conread position: | 2-212 |
| Cow position: | chr5:72045460-72045666 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 2-213 |
| Cow position: | chr5:5016640-5016436 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 2-213 |
| Cow position: | chr5:28224659-28224459 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 204, 62 |
| Conread position: | 2-213 |
| Cow position: | chr5:51053431-51053646 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 2-214 |
| Cow position: | chr5:2240772-2240983 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 177 |
| Conread position: | 2-216 |
| Cow position: | chr5:24996004-24996217 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 2-218 |
| Cow position: | chr5:55177097-55176897 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-223 |
| Cow position: | chr5:57101309-57101527 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 204, 73 |
| Conread position: | 2-239 |
| Cow position: | chr5:46022841-46023084 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 2-264 |
| Cow position: | chr5:25035037-25035295 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 78, 160 |
| Conread position: | 3-174 |
| Cow position: | chr5:41226788-41226960 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 3-178 |
| Cow position: | chr5:53779371-53779195 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 163, 72 |
| Conread position: | 3-179 |
| Cow position: | chr5:24915309-24915486 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-179 |
| Cow position: | chr5:46710799-46710623 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 151 |
| Conread position: | 3-179 |
| Cow position: | chr5:56434099-56433922 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-184 |
| Cow position: | chr5:22091544-22091728 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 3-187 |
| Cow position: | chr5:54875477-54875666 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 3-190 |
| Cow position: | chr5:50578948-50579136 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-199 |
| Cow position: | chr5:51233808-51233998 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-201 |
| Cow position: | chr5:14550366-14550565 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 3-201 |
| Cow position: | chr5:52138154-52137954 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 3-202 |
| Cow position: | chr5:22608855-22608661 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-204 |
| Cow position: | chr5:40889079-40889281 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 3-207 |
| Cow position: | chr5:19335561-19335768 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 3-212 |
| Cow position: | chr5:11667968-11668177 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 3-212 |
| Cow position: | chr5:18062094-18062311 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-212 |
| Cow position: | chr5:32394818-32394607 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 53 |
| Conread position: | 3-212 |
| Cow position: | chr5:33560522-33560726 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-212 |
| Cow position: | chr5:47316759-47316966 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 3-213 |
| Cow position: | chr5:58737540-58737752 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 3-217 |
| Cow position: | chr5:37679389-37679173 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 25 |
| Conread position: | 4-174 |
| Cow position: | chr5:31527178-31527349 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 4-178 |
| Cow position: | chr5:17062864-17063039 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 4-179 |
| Cow position: | chr5:2355733-2355561 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 4-185 |
| Cow position: | chr5:70189293-70189107 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 4-186 |
| Cow position: | chr5:17554820-17554998 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 133, 73 |
| Conread position: | 4-186 |
| Cow position: | chr5:34288039-34288216 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-187 |
| Cow position: | chr5:16668908-16668730 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 4-187 |
| Cow position: | chr5:19278488-19278674 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 4-190 |
| Cow position: | chr5:13270800-13270987 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 4-197 |
| Cow position: | chr5:19561231-19561423 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 4-197 |
| Cow position: | chr5:57526712-57526901 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 124 |
| Conread position: | 4-199 |
| Cow position: | chr5:66582185-66581982 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 105 |
| Conread position: | 4-201 |
| Cow position: | chr5:66659729-66659528 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 4-203 |
| Cow position: | chr5:21617670-21617475 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-204 |
| Cow position: | chr5:35246892-35247096 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 4-204 |
| Cow position: | chr5:43403124-43402921 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 4-204 |
| Cow position: | chr5:47743836-47743644 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-204 |
| Cow position: | chr5:55942162-55942363 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 4-210 |
| Cow position: | chr5:73167799-73168001 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 71 |
| Conread position: | 4-212 |
| Cow position: | chr5:26262470-26262666 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 4-212 |
| Cow position: | chr5:30247310-30247514 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 4-212 |
| Cow position: | chr5:34976624-34976834 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 4-212 |
| Cow position: | chr5:44163158-44163361 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 4-212 |
| Cow position: | chr5:48867255-48867456 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-212 |
| Cow position: | chr5:64523649-64523855 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 4-212 |
| Cow position: | chr5:67634293-67634509 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-213 |
| Cow position: | chr5:15471133-15470940 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-213 |
| Cow position: | chr5:19752516-19752313 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 198, 55 |
| Conread position: | 5-183 |
| Cow position: | chr5:50087982-50087807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 5-185 |
| Cow position: | chr5:54751022-54750842 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 5-186 |
| Cow position: | chr5:62996173-62995991 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 5-193 |
| Cow position: | chr5:53980538-53980728 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 68, 86 |
| Conread position: | 5-204 |
| Cow position: | chr5:65552507-65552695 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-211 |
| Cow position: | chr5:44196716-44196920 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 5-213 |
| Cow position: | chr5:34108843-34109052 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 68, 94 |
| Conread position: | 5-213 |
| Cow position: | chr5:51920504-51920294 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 5-244 |
| Cow position: | chr5:54753035-54753277 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 7-212 |
| Cow position: | chr5:16939380-16939586 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 8-187 |
| Cow position: | chr5:16893567-16893738 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-187 |
| Cow position: | chr5:26147800-26147624 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 8-187 |
| Cow position: | chr5:53795232-53795058 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 8-190 |
| Cow position: | chr5:20812760-20812576 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 8-190 |
| Cow position: | chr5:64843754-64843941 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 8-193 |
| Cow position: | chr5:26097501-26097316 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-199 |
| Cow position: | chr5:38040357-38040543 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-200 |
| Cow position: | chr5:6695760-6695565 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 8-201 |
| Cow position: | chr5:36143189-36143006 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-201 |
| Cow position: | chr5:54312812-54312620 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 8-211 |
| Cow position: | chr5:30628942-30629150 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 8-212 |
| Cow position: | chr5:16937823-16938014 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 8-212 |
| Cow position: | chr5:29828259-29828054 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 8-212 |
| Cow position: | chr5:33834251-33834050 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 8-212 |
| Cow position: | chr5:45419927-45420129 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 8-212 |
| Cow position: | chr5:52164962-52165169 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 113 |
| Conread position: | 8-212 |
| Cow position: | chr5:56613352-56613556 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 8-214 |
| Cow position: | chr5:20779188-20779390 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 198, 70 |
| Conread position: | 8-223 |
| Cow position: | chr5:29352921-29353127 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-224 |
| Cow position: | chr5:3743537-3743318 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 8-224 |
| Cow position: | chr5:52108047-52108271 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 120 |
| Conread position: | 9-166 |
| Cow position: | chr5:63939848-63940007 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 9-190 |
| Cow position: | chr5:20882404-20882594 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 9-206 |
| Cow position: | chr5:55019498-55019306 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 9-212 |
| Cow position: | chr5:16214891-16214695 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-213 |
| Cow position: | chr5:52778354-52778553 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 10-187 |
| Cow position: | chr5:30035278-30035100 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 10-187 |
| Cow position: | chr5:62572740-62572565 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 10-201 |
| Cow position: | chr5:25598038-25597852 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 10-213 |
| Cow position: | chr5:55129550-55129350 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 12-201 |
| Cow position: | chr5:12247532-12247718 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 12-204 |
| Cow position: | chr5:38853558-38853365 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 12-212 |
| Cow position: | chr5:45225613-45225805 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 12-212 |
| Cow position: | chr5:49501611-49501816 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 12-213 |
| Cow position: | chr5:30266678-30266881 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 13-201 |
| Cow position: | chr5:57419590-57419775 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-212 |
| Cow position: | chr5:6528894-6528691 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 13-213 |
| Cow position: | chr5:57279592-57279390 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 14-212 |
| Cow position: | chr5:34914347-34914544 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 14-212 |
| Cow position: | chr5:35513428-35513223 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 15-212 |
| Cow position: | chr5:23678500-23678691 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 17-187 |
| Cow position: | chr5:62011887-62011716 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 17-204 |
| Cow position: | chr5:11427031-11427217 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 17-213 |
| Cow position: | chr5:30419179-30418981 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 21-190 |
| Cow position: | chr5:62341231-62341058 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 21-192 |
| Cow position: | chr5:70353785-70353956 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 22-172 |
| Cow position: | chr5:32935942-32935792 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 22-184 |
| Cow position: | chr5:60741442-60741280 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 22-210 |
| Cow position: | chr5:57265705-57265895 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 22-212 |
| Cow position: | chr5:55795773-55795959 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 22-274 |
| Cow position: | chr5:64026818-64027069 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 191 |
| Conread position: | 23-198 |
| Cow position: | chr5:58856294-58856125 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 23-204 |
| Cow position: | chr5:69461531-69461349 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 27-201 |
| Cow position: | chr5:33482908-33482740 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 147, 51 |
| Conread position: | 28-196 |
| Cow position: | chr5:17566243-17566414 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 159 |
| Conread position: | 31-177 |
| Cow position: | chr5:30497685-30497540 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 31-179 |
| Cow position: | chr5:22102746-22102599 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 31-210 |
| Cow position: | chr5:37713464-37713644 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 31-211 |
| Cow position: | chr5:65050031-65050202 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 31-212 |
| Cow position: | chr5:61492286-61492101 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 31-228 |
| Cow position: | chr5:11769460-11769261 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 32-212 |
| Cow position: | chr5:30805345-30805173 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 33-177 |
| Cow position: | chr5:56327537-56327678 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 33-214 |
| Cow position: | chr5:65679787-65679964 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 33-223 |
| Cow position: | chr5:3589213-3589028 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 37-210 |
| Cow position: | chr5:56011313-56011137 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 39-212 |
| Cow position: | chr5:7723844-7723672 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 40-225 |
| Cow position: | chr5:6033615-6033432 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 47-186 |
| Cow position: | chr5:17602033-17602170 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 48-212 |
| Cow position: | chr5:37646377-37646535 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 49-211 |
| Cow position: | chr5:26093994-26094157 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 51-213 |
| Cow position: | chr5:6503711-6503875 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 58-211 |
| Cow position: | chr5:51935350-51935199 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 59-201 |
| Cow position: | chr5:26476858-26476998 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 59-201 |
| Cow position: | chr5:63426842-63426986 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 59-202 |
| Cow position: | chr5:42623020-42623161 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 59-209 |
| Cow position: | chr5:43992488-43992335 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 59-212 |
| Cow position: | chr5:458648-458497 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 59-228 |
| Cow position: | chr5:60908826-60908659 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 60-190 |
| Cow position: | chr5:38382643-38382769 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 60-201 |
| Cow position: | chr5:53710530-53710670 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 60-223 |
| Cow position: | chr5:41981527-41981370 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 60-226 |
| Cow position: | chr5:58555294-58555131 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 61-212 |
| Cow position: | chr5:9369113-9369263 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 62-201 |
| Cow position: | chr5:59627255-59627119 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 67-190 |
| Cow position: | chr5:51125856-51125979 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-212 |
| Cow position: | chr5:45273352-45273493 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 68-187 |
| Cow position: | chr5:35725749-35725866 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 17 |
| Conread position: | 68-202 |
| Cow position: | chr5:54086689-54086559 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 68-203 |
| Cow position: | chr5:12738407-12738538 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 70-204 |
| Cow position: | chr5:35126204-35126071 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 70-212 |
| Cow position: | chr5:15479274-15479134 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 78-223 |
| Cow position: | chr5:4710010-4710153 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 80-212 |
| Cow position: | chr5:63656616-63656485 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 80-223 |
| Cow position: | chr5:56361933-56361793 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 81-178 |
| Cow position: | chr5:17644489-17644586 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-212 |
| Cow position: | chr5:26723586-26723456 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 81-212 |
| Cow position: | chr5:47323601-47323471 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 81-212 |
| Cow position: | chr5:54311475-54311344 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.