Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig2-39K03.5
        

               Conread position:
               1-142
               

               Cow position:
               chr6:16016266-16016125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               1-142
               

               Cow position:
               chr6:54828089-54828231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               1-147
               

               Cow position:
               chr6:50444884-50445031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr6:16137536-16137692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               1-155
               

               Cow position:
               chr6:16627960-16627813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr6:54840269-54840430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               1-172
               

               Cow position:
               chr6:43906450-43906622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr6:19936337-19936509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-177
               

               Cow position:
               chr6:21052215-21052393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr6:28561937-28562112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-177
               

               Cow position:
               chr6:34076394-34076218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               1-177
               

               Cow position:
               chr6:57300001-57299815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               68, 138
               

               Conread position:
               1-177
               

               Cow position:
               chr6:66293714-66293541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               1-178
               

               Cow position:
               chr6:24903344-24903523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr6:31847013-31847186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               173, 66
               

               Conread position:
               1-178
               

               Cow position:
               chr6:58697398-58697576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               1-179
               

               Cow position:
               chr6:68246600-68246779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr6:34721880-34722055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               1-184
               

               Cow position:
               chr6:45159824-45160008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-185
               

               Cow position:
               chr6:33302627-33302444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr6:1173716-1173909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr6:24776369-24776186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               1-186
               

               Cow position:
               chr6:45920989-45921166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:8186956-8187143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               71, 88
               

               Conread position:
               1-187
               

               Cow position:
               chr6:19045859-19045669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:23058445-23058258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:55044410-55044595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               1-187
               

               Cow position:
               chr6:62079149-62078969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:62724789-62724602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               1-187
               

               Cow position:
               chr6:66434185-66433997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 158
               

               Conread position:
               1-188
               

               Cow position:
               chr6:35984903-35985090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 88
               

               Conread position:
               1-189
               

               Cow position:
               chr6:54821065-54820876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-190
               

               Cow position:
               chr6:8468890-8468709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-190
               

               Cow position:
               chr6:13742218-13742032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               1-190
               

               Cow position:
               chr6:20076028-20075837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 91
               

               Conread position:
               1-190
               

               Cow position:
               chr6:35726321-35726138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               1-191
               

               Cow position:
               chr6:44543916-44544107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               1-191
               

               Cow position:
               chr6:49686051-49685863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 159
               

               Conread position:
               1-192
               

               Cow position:
               chr6:5445899-5445706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               1-193
               

               Cow position:
               chr6:47151049-47150861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr6:50883447-50883641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               175, 68
               

               Conread position:
               1-197
               

               Cow position:
               chr6:61514967-61515151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               1-199
               

               Cow position:
               chr6:34475327-34475526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr6:35181023-35181223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               1-201
               

               Cow position:
               chr6:17705065-17704864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               1-201
               

               Cow position:
               chr6:28559771-28559560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 74
               

               Conread position:
               1-201
               

               Cow position:
               chr6:44867315-44867510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr6:51553376-51553174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               1-201
               

               Cow position:
               chr6:54831709-54831509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               1-201
               

               Cow position:
               chr6:62370956-62371144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr6:62437648-62437447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               1-202
               

               Cow position:
               chr6:8366045-8365843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               74, 89
               

               Conread position:
               1-202
               

               Cow position:
               chr6:41014743-41014947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               1-204
               

               Cow position:
               chr6:42728877-42728675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               1-204
               

               Cow position:
               chr6:58304643-58304444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               1-204
               

               Cow position:
               chr6:65264320-65264512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr6:66259968-66259759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr6:6201664-6201449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr6:18447284-18447493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               1-210
               

               Cow position:
               chr6:47783098-47782884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr6:50467369-50467158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               1-210
               

               Cow position:
               chr6:55209791-55209581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               1-211
               

               Cow position:
               chr6:15587361-15587572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               1-211
               

               Cow position:
               chr6:28088816-28089025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 57
               

               Conread position:
               1-212
               

               Cow position:
               chr6:1103514-1103717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr6:5095311-5095523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               1-212
               

               Cow position:
               chr6:5330645-5330434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:10176068-10176280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               63, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:12669329-12669122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 89
               

               Conread position:
               1-212
               

               Cow position:
               chr6:16102961-16103174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               1-212
               

               Cow position:
               chr6:16700485-16700283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:17313969-17313757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 132
               

               Conread position:
               1-212
               

               Cow position:
               chr6:19225161-19225352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr6:19402076-19401866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               158, 65
               

               Conread position:
               1-212
               

               Cow position:
               chr6:19996846-19996638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr6:20219548-20219754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               1-212
               

               Cow position:
               chr6:35318902-35319112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr6:42483646-42483437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:46558285-46558079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr6:50090876-50090664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:53932614-53932827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:55417302-55417507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               188, 72
               

               Conread position:
               1-212
               

               Cow position:
               chr6:57079657-57079445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-212
               

               Cow position:
               chr6:59104835-59104621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               1-212
               

               Cow position:
               chr6:61883942-61884145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               1-212
               

               Cow position:
               chr6:64432164-64431959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               157, 55
               

               Conread position:
               1-212
               

               Cow position:
               chr6:66590303-66590104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               1-213
               

               Cow position:
               chr6:4468997-4468789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               1-213
               

               Cow position:
               chr6:24536295-24536512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-213
               

               Cow position:
               chr6:41376001-41375792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               199, 79
               

               Conread position:
               1-213
               

               Cow position:
               chr6:47648003-47648216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               1-213
               

               Cow position:
               chr6:55548303-55548514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               199, 46
               

               Conread position:
               1-214
               

               Cow position:
               chr6:3952752-3952537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               71, 88
               

               Conread position:
               1-214
               

               Cow position:
               chr6:8688619-8688828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               191, 66
               

               Conread position:
               1-214
               

               Cow position:
               chr6:43345209-43345423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               1-214
               

               Cow position:
               chr6:64428963-64429177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               1-215
               

               Cow position:
               chr6:54849162-54848946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr6:21183992-21184205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               1-222
               

               Cow position:
               chr6:21475956-21475737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               212, 30
               

               Conread position:
               1-222
               

               Cow position:
               chr6:55296861-55297085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               1-222
               

               Cow position:
               chr6:57089435-57089211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               171, 78
               

               Conread position:
               2-142
               

               Cow position:
               chr6:66058479-66058616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-169
               

               Cow position:
               chr6:39358113-39358276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-175
               

               Cow position:
               chr6:17404793-17404619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               2-177
               

               Cow position:
               chr6:30983744-30983576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-179
               

               Cow position:
               chr6:57467829-57467651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               2-179
               

               Cow position:
               chr6:59297275-59297107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-186
               

               Cow position:
               chr6:21083311-21083493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               2-189
               

               Cow position:
               chr6:48097373-48097555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               126, 16
               

               Conread position:
               2-189
               

               Cow position:
               chr6:53811816-53811628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               81, 185
               

               Conread position:
               2-190
               

               Cow position:
               chr6:15974293-15974476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               2-190
               

               Cow position:
               chr6:26408272-26408461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               2-193
               

               Cow position:
               chr6:36225340-36225149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-198
               

               Cow position:
               chr6:47246012-47245816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 85
               

               Conread position:
               2-200
               

               Cow position:
               chr6:3937017-3936818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               2-200
               

               Cow position:
               chr6:67574620-67574421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               2-201
               

               Cow position:
               chr6:16091127-16090936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr6:32126282-32126089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr6:37149412-37149222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               2-202
               

               Cow position:
               chr6:12965084-12964884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               2-202
               

               Cow position:
               chr6:22876698-22876899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr6:47356056-47355853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               2-208
               

               Cow position:
               chr6:51933769-51933580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-209
               

               Cow position:
               chr6:19293028-19292826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               2-209
               

               Cow position:
               chr6:53546259-53546060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-210
               

               Cow position:
               chr6:54846046-54846256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               2-211
               

               Cow position:
               chr6:120467-120270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-211
               

               Cow position:
               chr6:1475567-1475368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-211
               

               Cow position:
               chr6:5609212-5609422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               63, 181
               

               Conread position:
               2-211
               

               Cow position:
               chr6:17068425-17068625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-211
               

               Cow position:
               chr6:46466048-46465844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-211
               

               Cow position:
               chr6:48379381-48379591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-211
               

               Cow position:
               chr6:50504686-50504479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:8600235-8600022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               2-212
               

               Cow position:
               chr6:9832427-9832228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:15243069-15242856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               2-212
               

               Cow position:
               chr6:15300610-15300807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:19446483-19446275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               76, 157
               

               Conread position:
               2-212
               

               Cow position:
               chr6:21004910-21004696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:32453619-32453407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               2-212
               

               Cow position:
               chr6:33150064-33150270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               2-212
               

               Cow position:
               chr6:37692979-37692773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:38771501-38771307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:39093975-39093771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               2-212
               

               Cow position:
               chr6:43787678-43787889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               73, 90
               

               Conread position:
               2-212
               

               Cow position:
               chr6:51529960-51530168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               2-212
               

               Cow position:
               chr6:54127591-54127791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:60118372-60118172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-213
               

               Cow position:
               chr6:48436060-48435855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               2-213
               

               Cow position:
               chr6:67728608-67728395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               2-221
               

               Cow position:
               chr6:58725597-58725384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-222
               

               Cow position:
               chr6:17997087-17997306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 172
               

               Conread position:
               2-225
               

               Cow position:
               chr6:44078745-44078528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-226
               

               Cow position:
               chr6:32268657-32268878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               211, 71
               

               Conread position:
               2-227
               

               Cow position:
               chr6:54490516-54490725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-235
               

               Cow position:
               chr6:1941604-1941832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 67
               

               Conread position:
               3-139
               

               Cow position:
               chr6:23381437-23381574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr6:32006227-32006399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr6:29852826-29853017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 172
               

               Conread position:
               3-190
               

               Cow position:
               chr6:19563250-19563440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-190
               

               Cow position:
               chr6:46206520-46206341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-190
               

               Cow position:
               chr6:63251692-63251879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 86
               

               Conread position:
               3-199
               

               Cow position:
               chr6:18608581-18608777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               3-201
               

               Cow position:
               chr6:22525554-22525363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr6:33510018-33509822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               3-202
               

               Cow position:
               chr6:34569645-34569439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 106
               

               Conread position:
               3-209
               

               Cow position:
               chr6:13367511-13367310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-209
               

               Cow position:
               chr6:15937623-15937831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               3-211
               

               Cow position:
               chr6:10039955-10039746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               3-212
               

               Cow position:
               chr6:11246997-11246788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 83
               

               Conread position:
               3-213
               

               Cow position:
               chr6:2607837-2607624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               3-213
               

               Cow position:
               chr6:68644222-68644009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               3-222
               

               Cow position:
               chr6:8369653-8369436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               3-249
               

               Cow position:
               chr6:1769965-1770215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 235
               

               Conread position:
               4-174
               

               Cow position:
               chr6:38853428-38853599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               4-176
               

               Cow position:
               chr6:7539801-7539631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-177
               

               Cow position:
               chr6:36939102-36938924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               4-184
               

               Cow position:
               chr6:16411841-16411664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               4-186
               

               Cow position:
               chr6:52478183-52478363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr6:15058603-15058415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr6:13565314-13565118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr6:14914006-14914205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               4-204
               

               Cow position:
               chr6:23353784-23353581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 179
               

               Conread position:
               4-210
               

               Cow position:
               chr6:445558-445346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:323074-323283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:13510400-13510195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               4-212
               

               Cow position:
               chr6:15446965-15447176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:16287839-16288036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:17794527-17794742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:21535268-21535059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               170, 83
               

               Conread position:
               4-212
               

               Cow position:
               chr6:43134713-43134917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr6:56986420-56986626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 163
               

               Conread position:
               4-212
               

               Cow position:
               chr6:62670099-62669887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               4-213
               

               Cow position:
               chr6:21399526-21399736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               4-213
               

               Cow position:
               chr6:38207258-38207469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               4-213
               

               Cow position:
               chr6:42567724-42567512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 88
               

               Conread position:
               4-213
               

               Cow position:
               chr6:46173030-46173238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 83
               

               Conread position:
               4-226
               

               Cow position:
               chr6:8731647-8731417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               4-227
               

               Cow position:
               chr6:17548740-17548966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               4-227
               

               Cow position:
               chr6:22850024-22850247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 98
               

               Conread position:
               5-161
               

               Cow position:
               chr6:4760220-4760064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               5-176
               

               Cow position:
               chr6:61644629-61644801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr6:41733862-41733690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               5-185
               

               Cow position:
               chr6:34380589-34380766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               5-187
               

               Cow position:
               chr6:14471592-14471408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-187
               

               Cow position:
               chr6:47022786-47022607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               5-211
               

               Cow position:
               chr6:15305798-15305594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               5-211
               

               Cow position:
               chr6:60517065-60516849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 158
               

               Conread position:
               5-211
               

               Cow position:
               chr6:67451145-67451348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               5-251
               

               Cow position:
               chr6:16262008-16261765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 81
               

               Conread position:
               8-177
               

               Cow position:
               chr6:55015107-55014935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               8-178
               

               Cow position:
               chr6:32336263-32336086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               8-178
               

               Cow position:
               chr6:60186430-60186607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               8-185
               

               Cow position:
               chr6:6614849-6614669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 115
               

               Conread position:
               8-190
               

               Cow position:
               chr6:53711627-53711446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               8-202
               

               Cow position:
               chr6:12761504-12761311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               8-202
               

               Cow position:
               chr6:38610198-38610000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               8-202
               

               Cow position:
               chr6:61681302-61681109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               8-204
               

               Cow position:
               chr6:21587210-21587400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               8-211
               

               Cow position:
               chr6:12091762-12091970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               8-211
               

               Cow position:
               chr6:44194332-44194526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               8-211
               

               Cow position:
               chr6:65534944-65535148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               8-212
               

               Cow position:
               chr6:2585165-2584964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               8-212
               

               Cow position:
               chr6:23401771-23401970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               8-212
               

               Cow position:
               chr6:37395179-37395379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               8-212
               

               Cow position:
               chr6:47305566-47305363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               76, 94
               

               Conread position:
               9-177
               

               Cow position:
               chr6:14263666-14263834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               9-178
               

               Cow position:
               chr6:30895768-30895936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               9-179
               

               Cow position:
               chr6:3330219-3330048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               9-182
               

               Cow position:
               chr6:48793003-48792829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 88
               

               Conread position:
               9-211
               

               Cow position:
               chr6:19696032-19695832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               9-212
               

               Cow position:
               chr6:143155-143352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               9-212
               

               Cow position:
               chr6:1429857-1429662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               9-212
               

               Cow position:
               chr6:33450754-33450948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               9-228
               

               Cow position:
               chr6:27239781-27239999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 80
               

               Conread position:
               10-184
               

               Cow position:
               chr6:26054678-26054855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               10-185
               

               Cow position:
               chr6:60777995-60777816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               10-201
               

               Cow position:
               chr6:57295954-57295762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               10-204
               

               Cow position:
               chr6:1870975-1871168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               10-228
               

               Cow position:
               chr6:60740232-60740021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               11-212
               

               Cow position:
               chr6:28483238-28483037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               139, 67
               

               Conread position:
               12-199
               

               Cow position:
               chr6:30825556-30825731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 52
               

               Conread position:
               12-201
               

               Cow position:
               chr6:9718697-9718879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr6:4691745-4691953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 115
               

               Conread position:
               12-213
               

               Cow position:
               chr6:62929718-62929516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               13-170
               

               Cow position:
               chr6:33290191-33290032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 79
               

               Conread position:
               13-199
               

               Cow position:
               chr6:35842879-35842693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               13-212
               

               Cow position:
               chr6:35990020-35990214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               151, 54
               

               Conread position:
               13-212
               

               Cow position:
               chr6:48469230-48469022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               13-212
               

               Cow position:
               chr6:66947604-66947796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               13-220
               

               Cow position:
               chr6:52413081-52412874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 179
               

               Conread position:
               15-212
               

               Cow position:
               chr6:40774118-40774310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               16-224
               

               Cow position:
               chr6:27636533-27636323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               17-166
               

               Cow position:
               chr6:62224639-62224489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               17-177
               

               Cow position:
               chr6:18440260-18440421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               17-212
               

               Cow position:
               chr6:67187896-67187705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               158, 60
               

               Conread position:
               18-212
               

               Cow position:
               chr6:2899346-2899547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               18-213
               

               Cow position:
               chr6:41441532-41441729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               19-212
               

               Cow position:
               chr6:6060358-6060550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               22-201
               

               Cow position:
               chr6:16380757-16380577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               22-211
               

               Cow position:
               chr6:8125539-8125349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               22-213
               

               Cow position:
               chr6:37246229-37246420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               23-212
               

               Cow position:
               chr6:50984434-50984244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               27-212
               

               Cow position:
               chr6:47799498-47799315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               30-204
               

               Cow position:
               chr6:31865297-31865128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               31-187
               

               Cow position:
               chr6:44541005-44540855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               31-191
               

               Cow position:
               chr6:69153613-69153451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               31-201
               

               Cow position:
               chr6:36189901-36189731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               31-204
               

               Cow position:
               chr6:21514405-21514578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               31-208
               

               Cow position:
               chr6:21467064-21467238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               31-211
               

               Cow position:
               chr6:67282092-67281918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               31-212
               

               Cow position:
               chr6:7801194-7801370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               31-213
               

               Cow position:
               chr6:28852177-28851993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               31-217
               

               Cow position:
               chr6:16640958-16640774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               31-226
               

               Cow position:
               chr6:67323507-67323318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               31-227
               

               Cow position:
               chr6:2153395-2153591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               32-179
               

               Cow position:
               chr6:67305267-67305124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               32-187
               

               Cow position:
               chr6:61978628-61978472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               36-201
               

               Cow position:
               chr6:55502969-55502799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               37-190
               

               Cow position:
               chr6:58076591-58076437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               37-201
               

               Cow position:
               chr6:21590900-21590740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               47-223
               

               Cow position:
               chr6:40032372-40032203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               52-178
               

               Cow position:
               chr6:139463-139588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               53-204
               

               Cow position:
               chr6:36454414-36454566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               53-212
               

               Cow position:
               chr6:55475437-55475277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               54-186
               

               Cow position:
               chr6:35654373-35654502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               59-185
               

               Cow position:
               chr6:32184873-32184999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               59-187
               

               Cow position:
               chr6:16738533-16738407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               59-212
               

               Cow position:
               chr6:16764472-16764635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               59-212
               

               Cow position:
               chr6:35993759-35993606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               59-212
               

               Cow position:
               chr6:60451600-60451449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               60-190
               

               Cow position:
               chr6:62478695-62478826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               60-212
               

               Cow position:
               chr6:47339181-47339334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               61-212
               

               Cow position:
               chr6:54867691-54867539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               62-190
               

               Cow position:
               chr6:19508017-19508144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               64-212
               

               Cow position:
               chr6:582104-582250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-213
               

               Cow position:
               chr6:37783571-37783421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               68-203
               

               Cow position:
               chr6:5461614-5461745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               68-212
               

               Cow position:
               chr6:21235208-21235064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               69-212
               

               Cow position:
               chr6:36652586-36652444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-187
               

               Cow position:
               chr6:5957588-5957701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               70-212
               

               Cow position:
               chr6:67456881-67456740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               74-202
               

               Cow position:
               chr6:46865432-46865560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-213
               

               Cow position:
               chr6:9008456-9008592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               81-212
               

               Cow position:
               chr6:19681372-19681503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-213
               

               Cow position:
               chr6:42565840-42565709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               95-212
               

               Cow position:
               chr6:61142423-61142541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               89, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-142
Cow position:	chr6:16016266-16016125 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	107
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	81, 95
Conread position:	1-147
Cow position:	chr6:50444884-50445031 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	111
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	81, 0
Conread position:	1-155
Cow position:	chr6:16137536-16137692 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	114
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	62, 90
Conread position:	1-156
Cow position:	chr6:54840269-54840430 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	120
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	60, 93
Conread position:	1-172
Cow position:	chr6:43906450-43906622 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	130
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	75, 0
Conread position:	1-173
Cow position:	chr6:19936337-19936509 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	127
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	74, 88
Conread position:	1-177
Cow position:	chr6:21052215-21052393 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	134
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	74, 0
Conread position:	1-178
Cow position:	chr6:24903344-24903523 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	129
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	81, 0
Conread position:	1-179
Cow position:	chr6:68246600-68246779 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	125
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	75, 0
Conread position:	1-184
Cow position:	chr6:34721880-34722055 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	140
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	29, 68
Conread position:	1-185
Cow position:	chr6:33302627-33302444 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	137
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	177, 0
Conread position:	1-186
Cow position:	chr6:1173716-1173909 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	137
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	72, 0
Conread position:	1-187
Cow position:	chr6:8186956-8187143 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	141
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	71, 88
Conread position:	1-188
Cow position:	chr6:35984903-35985090 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	146
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	71, 88
Conread position:	1-189
Cow position:	chr6:54821065-54820876 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	137
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	74, 88
Conread position:	1-190
Cow position:	chr6:8468890-8468709 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	135
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	20, 0
Conread position:	1-191
Cow position:	chr6:44543916-44544107 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	144
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	82, 74
Conread position:	1-192
Cow position:	chr6:5445899-5445706 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	137
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	71, 87
Conread position:	1-193
Cow position:	chr6:47151049-47150861 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	132
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	84, 0
Conread position:	1-197
Cow position:	chr6:50883447-50883641 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	140
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	175, 68