• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig2-39K03.5
        

               
Conread position:
               
1-127
               

               
Cow position:
               
chrX:10479970-10479843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chrX:1996231-1996366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chrX:35509460-35509599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chrX:37717942-37717801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chrX:11670907-11670764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chrX:33678250-33678403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chrX:1938233-1938080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chrX:16801047-16801197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chrX:22552759-22552915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chrX:26881859-26882021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chrX:296612-296448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chrX:28107066-28106902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chrX:41199442-41199279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chrX:15100198-15100037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chrX:47100374-47100549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:10415032-10415207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:37867653-37867477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chrX:1101770-1101602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chrX:6634565-6634388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chrX:13347489-13347317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chrX:41435322-41435505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:8759843-8759668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:27442318-27442496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:33466842-33466661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:36367714-36367892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:41858664-41858839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:4403538-4403359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:14951133-14951311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:35409972-35409794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chrX:37751891-37752068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chrX:44123469-44123293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chrX:42760473-42760289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chrX:45843372-45843558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:34441233-34441419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:35681787-35681601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:41790207-41790394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:11454394-11454220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:14925493-14925310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:17949272-17949459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:32330391-32330201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:34398563-34398750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:42050049-42050236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:46533084-46533271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chrX:1960205-1960393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chrX:16556003-16556185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:51682-51865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:2314398-2314588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:4092142-4091955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:4612654-4612851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:11781467-11781284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:30958948-30958757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chrX:36921921-36922118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chrX:30962655-30962856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:4632634-4632838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:12095551-12095754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:12290938-12290739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:13122164-13121958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:20887429-20887619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:35392085-35392274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:36866393-36866193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:37956065-37955867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:41941843-41941643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:44055023-44054822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:44192222-44192427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:3580165-3579963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:8917615-8917413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:26493227-26493025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:26843046-26843250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:36283560-36283357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:19356684-19356486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:43008830-43008626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:46588040-46587839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:48198428-48198630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chrX:11653987-11653775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
172, 74
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chrX:35276206-35275997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:9650807-9651014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:31729657-31729452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:34544006-34543794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:46532270-46532485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:4268850-4269056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
168, 77
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:17524163-17524375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:17956909-17956702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:18204246-18204458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:21328134-21327920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:27508804-27509013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:29478942-29478733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:30672164-30672387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:31489741-31489529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:38321163-38321373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:38587625-38587834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:38964317-38964117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:40680835-40680623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:41027380-41027168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:41238142-41238345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:42449793-42450005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:44339101-44339312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:4645694-4645905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:20168775-20168565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:24365602-24365813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:25207641-25207847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:26979571-26979782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:35269076-35268873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chrX:35885512-35885720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
204, 76
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chrX:20339675-20339885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chrX:19761969-19761760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chrX:27261410-27261191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:20677584-20677365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:41878717-41878931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chrX:4109405-4109180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chrX:38968115-38967883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chrX:25815679-25815909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chrX:27175220-27174998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chrX:3494831-3494981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chrX:41363631-41363809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chrX:23497478-23497643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chrX:41166610-41166777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chrX:20677923-20678095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chrX:5097575-5097756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chrX:20583879-20583709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chrX:31983359-31983542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chrX:27415369-27415538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chrX:13177265-13177438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chrX:42875428-42875250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:27270588-27270410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:32867089-32866910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:37072605-37072424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:40685110-40685293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:8327124-8326938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:17293175-17292989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chrX:45412024-45412206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chrX:45759888-45759705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chrX:13924080-13923895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chrX:46910027-46909846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chrX:597259-597442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chrX:13913294-13913097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chrX:31436688-31436495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:15546100-15545902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:28068070-28067870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:30133105-30133298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:33654624-33654824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chrX:40337130-40336930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chrX:46072611-46072798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chrX:10516473-10516270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chrX:27145818-27145621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chrX:31480185-31479988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chrX:44961974-44961768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chrX:28940463-28940256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chrX:38094307-38094504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chrX:38642461-38642261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chrX:11656297-11656091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:4327963-4328174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:7278125-7277920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:11633901-11633691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:11762792-11762992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:16323796-16324005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 141
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:19018609-19018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:24170506-24170720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:25037211-25036996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:27074832-27075042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:29601610-29601819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:31442620-31442820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:34315746-34315528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:34565504-34565295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:36356323-36356121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:37489948-37489728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:38218932-38218723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:38302033-38301818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:39220307-39220088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:42894141-42893933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chrX:48558965-48558755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chrX:1499873-1499672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
197, 72
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chrX:32910316-32910110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
203, 68
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:8869185-8869402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:9251944-9252161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:12979616-12979834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:27431705-27431918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chrX:22075014-22074794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chrX:15146980-15147196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chrX:27446902-27446680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chrX:42492302-42492526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chrX:6559237-6559454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chrX:7351520-7351293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chrX:6389297-6389124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chrX:19394773-19394596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chrX:23471650-23471823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chrX:876629-876806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:17498541-17498356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:21663513-21663328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chrX:44995718-44995529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chrX:27416313-27416120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:25035163-25035362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:34554942-34554743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chrX:3494603-3494805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chrX:25049063-25049272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chrX:29050460-29050260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chrX:15006941-15007140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chrX:31250608-31250397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chrX:42246963-42247173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chrX:18111597-18111385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chrX:40320625-40320413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chrX:44201827-44202039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chrX:44859644-44859856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:11844018-11844235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:16541438-16541650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
4-157
               

               
Cow position:
               
chrX:11589150-11589303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chrX:37867471-37867301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chrX:29451328-29451508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chrX:44225513-44225690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chrX:23358900-23359076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chrX:23335758-23335950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chrX:22392771-22392967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:1122330-1122534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:3806895-3806691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:7648195-7648401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:16836077-16836277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:32318517-32318314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:34420953-34420743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:35285391-35285182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:41123262-41123071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:42432297-42432505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chrX:42855680-42855467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chrX:161617-161419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
202, 17
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chrX:35659011-35658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chrX:9634975-9635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chrX:26881345-26881567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chrX:20345668-20345447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chrX:6407761-6407541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chrX:40108296-40108529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chrX:4559951-4559729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chrX:10237697-10237864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chrX:31986356-31986537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chrX:16763714-16763893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chrX:48822126-48822308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chrX:16762984-16762791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chrX:20957455-20957258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chrX:28837100-28836914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chrX:27228345-27228143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chrX:41809959-41810154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chrX:38208338-38208534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chrX:10831265-10831481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chrX:38549662-38549450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
168, 82
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chrX:28877952-28878165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
8-173
               

               
Cow position:
               
chrX:36568844-36569008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chrX:30824198-30824032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chrX:34270774-34270604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chrX:34314234-34314058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
8-190
               

               
Cow position:
               
chrX:37749779-37749952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chrX:32877166-32877353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chrX:24331990-24331796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chrX:26205244-26205428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chrX:29544673-29544857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chrX:32420424-32420233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chrX:17231950-17231752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chrX:34836859-34837047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chrX:42836394-42836190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chrX:43150644-43150436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
8-213
               

               
Cow position:
               
chrX:27705800-27705594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
8-225
               

               
Cow position:
               
chrX:35382829-35383041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
198, 50
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chrX:36722601-36722771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chrX:34222926-34222739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chrX:1360294-1360105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
166, 58
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chrX:34238935-34238739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chrX:12309173-12309377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
9-213
               

               
Cow position:
               
chrX:8731306-8731101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
9-213
               

               
Cow position:
               
chrX:46793538-46793739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chrX:31515383-31515165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chrX:8642257-8642040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
10-179
               

               
Cow position:
               
chrX:46068552-46068717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
10-183
               

               
Cow position:
               
chrX:13144658-13144484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chrX:13868915-13868736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
12-185
               

               
Cow position:
               
chrX:33020647-33020473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chrX:28850927-28850761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chrX:22822264-22822055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chrX:31294360-31294563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
12-213
               

               
Cow position:
               
chrX:31948725-31948928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
12-213
               

               
Cow position:
               
chrX:46022984-46022782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
13-201
               

               
Cow position:
               
chrX:33204761-33204949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
13-206
               

               
Cow position:
               
chrX:32574524-32574332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
13-212
               

               
Cow position:
               
chrX:41068928-41068734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chrX:27511628-27511437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chrX:36976159-36975962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
17-225
               

               
Cow position:
               
chrX:19717718-19717519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chrX:19965192-19965389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chrX:21672763-21672563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
20-221
               

               
Cow position:
               
chrX:1719309-1719114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
22-201
               

               
Cow position:
               
chrX:11859337-11859517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
22-204
               

               
Cow position:
               
chrX:1055182-1055364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
23-224
               

               
Cow position:
               
chrX:43730029-43730225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chrX:29733388-29733583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
31-179
               

               
Cow position:
               
chrX:31252598-31252450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
31-204
               

               
Cow position:
               
chrX:17704578-17704406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chrX:34503118-34502929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chrX:39180043-39180224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chrX:45968336-45968147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
32-187
               

               
Cow position:
               
chrX:48118547-48118700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chrX:25459541-25459725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
33-212
               

               
Cow position:
               
chrX:7179079-7178906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chrX:9365491-9365667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chrX:22914860-22915031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chrX:23113466-23113283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
38-227
               

               
Cow position:
               
chrX:16575296-16575107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 177
               

               
Conread position:
               
47-212
               

               
Cow position:
               
chrX:24287759-24287922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
50-210
               

               
Cow position:
               
chrX:36313835-36313996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
50-212
               

               
Cow position:
               
chrX:14599704-14599546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
52-197
               

               
Cow position:
               
chrX:37062416-37062561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
52-211
               

               
Cow position:
               
chrX:6278330-6278488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
56-212
               

               
Cow position:
               
chrX:31829295-31829452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
59-185
               

               
Cow position:
               
chrX:40451922-40452048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
59-190
               

               
Cow position:
               
chrX:23860832-23860963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
59-204
               

               
Cow position:
               
chrX:38226949-38227090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chrX:20743766-20743613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chrX:23785807-23785656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chrX:27393865-27394017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chrX:29680099-29680252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chrX:37129430-37129278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
61-201
               

               
Cow position:
               
chrX:16409761-16409622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chrX:6259987-6260138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
62-187
               

               
Cow position:
               
chrX:31373694-31373570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
63-212
               

               
Cow position:
               
chrX:20697454-20697600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
64-214
               

               
Cow position:
               
chrX:38728890-38728743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
67-208
               

               
Cow position:
               
chrX:47342268-47342128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
67-212
               

               
Cow position:
               
chrX:25412058-25411916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
67-212
               

               
Cow position:
               
chrX:45113775-45113626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
68-212
               

               
Cow position:
               
chrX:15820746-15820604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
68-212
               

               
Cow position:
               
chrX:29289730-29289587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
70-212
               

               
Cow position:
               
chrX:5872467-5872326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
70-212
               

               
Cow position:
               
chrX:23562782-23562641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
86-190
               

               
Cow position:
               
chrX:2551227-2551122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
86-212
               

               
Cow position:
               
chrX:9416549-9416674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
87-199
               

               
Cow position:
               
chrX:46433625-46433513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-212
               

               
Cow position:
               
chrX:16830354-16830233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
95-196
               

               
Cow position:
               
chrX:19690341-19690240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-201
               

               
Cow position:
               
chrX:25211053-25210949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
98-213
               

               
Cow position:
               
chrX:45005746-45005631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 9
               
Show alignments to all cow chromosomes.