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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-47B13.5
        

               
Conread position:
               
41-605
               

               
Cow position:
               
chr13:23456176-23456739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
462, 481
               

               
Conread position:
               
151-605
               

               
Cow position:
               
chr13:60905688-60906141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
352, 372
               

               
Conread position:
               
160-605
               

               
Cow position:
               
chr13:4735640-4736079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
343, 326
               

               
Conread position:
               
322-605
               

               
Cow position:
               
chr13:40989718-40989432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
323-544
               

               
Cow position:
               
chr13:29670460-29670677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
330-605
               

               
Cow position:
               
chr13:2414648-2414378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 18
               

               
Conread position:
               
334-622
               

               
Cow position:
               
chr13:32754617-32754905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
170, 9
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr13:13507484-13507257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
343-604
               

               
Cow position:
               
chr13:31809126-31808868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
343-607
               

               
Cow position:
               
chr13:15167432-15167168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 180
               

               
Conread position:
               
348-582
               

               
Cow position:
               
chr13:19289588-19289357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
348-603
               

               
Cow position:
               
chr13:11254278-11254020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
348-605
               

               
Cow position:
               
chr13:33466801-33467057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 175
               

               
Conread position:
               
348-607
               

               
Cow position:
               
chr13:18167620-18167368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
349-467
               

               
Cow position:
               
chr13:41337301-41337184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
349-472
               

               
Cow position:
               
chr13:48945543-48945421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
349-477
               

               
Cow position:
               
chr13:40300365-40300237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-477
               

               
Cow position:
               
chr13:51332458-51332586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-480
               

               
Cow position:
               
chr13:25320401-25320273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
349-485
               

               
Cow position:
               
chr13:35629625-35629492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr13:23196258-23196410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr13:34298972-34299122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr13:34871342-34871490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr13:19016212-19016058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr13:3556793-3556955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr13:34929163-34929325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
349-512
               

               
Cow position:
               
chr13:11261831-11261667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
349-513
               

               
Cow position:
               
chr13:37122165-37122330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-514
               

               
Cow position:
               
chr13:19274058-19273891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-521
               

               
Cow position:
               
chr13:6417922-6418090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr13:46736805-46736630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
349-525
               

               
Cow position:
               
chr13:20778085-20777909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
155, 50
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr13:3143834-3143657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr13:20520635-20520813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr13:37947312-37947488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
154, 88
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr13:43594212-43594390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-527
               

               
Cow position:
               
chr13:29658444-29658265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr13:4442138-4441956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
349-538
               

               
Cow position:
               
chr13:42245834-42246018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
349-539
               

               
Cow position:
               
chr13:3315005-3315191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
349-539
               

               
Cow position:
               
chr13:22022427-22022240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr13:13903237-13903427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr13:53328811-53329003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
108, 176
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr13:56692652-56692843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
144, 175
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr13:32152412-32152221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr13:34332906-34333099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr13:8782268-8782470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 175
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr13:9048981-9049182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 107
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr13:20464973-20465175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr13:33907362-33907157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr13:33162330-33162545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 187
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr13:43119892-43119686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr13:19262386-19262180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr13:32773974-32773765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr13:52251279-52251484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr13:60974915-60974708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
154, 181
               

               
Conread position:
               
349-562
               

               
Cow position:
               
chr13:52700316-52700108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
349-562
               

               
Cow position:
               
chr13:57027610-57027820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
349-564
               

               
Cow position:
               
chr13:27835729-27835940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr13:15460193-15460404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr13:19264407-19264192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
349-572
               

               
Cow position:
               
chr13:34762643-34762430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
349-573
               

               
Cow position:
               
chr13:52019783-52020005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr13:3021103-3020878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr13:10733350-10733572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr13:32921931-32921703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr13:53713486-53713710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
349-579
               

               
Cow position:
               
chr13:4663999-4664218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
349-579
               

               
Cow position:
               
chr13:20977505-20977271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
349-579
               

               
Cow position:
               
chr13:22080155-22079927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
349-579
               

               
Cow position:
               
chr13:42047310-42047078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr13:3799783-3800009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr13:9734558-9734328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr13:19218751-19218526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr13:30280365-30280601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
159, 111
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr13:44205664-44205428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:12877716-12877472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:16243845-16243612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:34112916-34112689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:39943971-39944206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:47369858-47370092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr13:52077211-52077447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:5317392-5317153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:6177445-6177688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 186
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:9693160-9692924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:10933418-10933180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:14409495-14409727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:26073536-26073305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 55
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:30034964-30034727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:30651782-30651545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 135
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:34508446-34508224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:49355324-49355561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:54095460-54095226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:54286167-54286400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr13:57423968-57423728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:670623-670864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
108, 175
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:3480361-3480122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
151, 173
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:5717313-5717072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 174
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:11290206-11290442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:48627412-48627173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr13:49514128-49514367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
349-591
               

               
Cow position:
               
chr13:56526726-56526960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-593
               

               
Cow position:
               
chr13:17328539-17328295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
349-594
               

               
Cow position:
               
chr13:60489677-60489919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:3015563-3015803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:11129869-11129626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:11136393-11136149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:21402186-21402425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:21905530-21905288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:24237589-24237835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr13:50618883-50618638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr13:11822567-11822322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
199, 163
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr13:41565616-41565369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 176
               

               
Conread position:
               
349-597
               

               
Cow position:
               
chr13:11252736-11252493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
349-598
               

               
Cow position:
               
chr13:7700688-7700928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
349-598
               

               
Cow position:
               
chr13:48251363-48251611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-600
               

               
Cow position:
               
chr13:47318176-47317921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:4615388-4615639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:6153147-6153400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:6343264-6343514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:15873066-15872805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:21135114-21135368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:22790524-22790272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:22906891-22906649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:34905212-34904961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:46459258-46459012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr13:55338119-55338367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
154, 50
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr13:1005497-1005245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr13:11821928-11821672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 104
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr13:52009986-52010229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr13:11148359-11148118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr13:22085151-22085403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr13:38013284-38013028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 119
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr13:52859615-52859371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:645306-645561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:681433-681688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:1590771-1590516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:1636794-1637049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:2465824-2466080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:2725425-2725170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:3163110-3162851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:3430121-3430376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:4262525-4262267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:4264616-4264357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:4944772-4945036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
126, 183
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:4963608-4963863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:5498423-5498168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:6361030-6361285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:6716652-6716398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:6869685-6869936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:7402787-7403042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:8009970-8010225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:8173017-8172761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:8300937-8301192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:9301766-9302021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:11390640-11390895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:11486418-11486673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:12389996-12389742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:12616356-12616109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:13126347-13126093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:13577281-13577022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 132
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:13776343-13776598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:14034195-14033940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:14302605-14302350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 170
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:14551749-14551494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:14590131-14589876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:15280670-15280925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:15538604-15538350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:15921078-15920824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 129
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:17317939-17317689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:18054638-18054893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:18121489-18121237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:18329743-18329488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:19102295-19102040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:19229806-19229555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 55
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:19565326-19565071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:19638820-19639073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:20472877-20472622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:20931043-20930788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:21009035-21009293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 181
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:24931438-24931184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:25848772-25849027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:26098751-26098496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:26160871-26161126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:26204077-26203822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:27326059-27326314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:27417244-27416989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:28130644-28130389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:28683961-28683708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:29055046-29054791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:29091845-29092101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:30468736-30468481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:31990250-31990517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:32081258-32081513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:32733809-32733554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:32793960-32793703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 245
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:32980853-32980604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:34038177-34037920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 176
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:34345684-34345939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:36673049-36673305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:42086751-42086496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:42215737-42215482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:42276978-42277234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
192, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:43892203-43892458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:43974576-43974321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:44323587-44323333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:45934006-45934261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:47007130-47007385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:47023317-47023062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:48377984-48378239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:49977052-49977307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:50063497-50063757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:50189692-50189436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:50440446-50440191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:51298106-51297851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:53052218-53052473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:53157007-53156747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:54975196-54975451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:58211264-58211009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:58313714-58313970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:60429482-60429728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:60646203-60645950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
154, 180
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr13:61954634-61954876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:1155099-1155355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 175
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:11809129-11808874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:15446655-15446395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 178
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:20683518-20683770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:36346609-36346341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:36937102-36937357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr13:49805575-49805320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:1011936-1011684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:4420919-4420662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:6054982-6054728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:10928394-10928641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
244, 106
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:11795322-11795062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 176
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:12978166-12977911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:16015432-16015167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 182
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:16344302-16344055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:16972831-16973083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:17800682-17800426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 170
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:20605513-20605767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:25695161-25695418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:33351772-33352021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:34728238-34728488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:34941050-34941305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 121
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:35540783-35541040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:37978581-37978839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:45072816-45073069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:51941342-51941081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 100
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:54237931-54237689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:57493576-57493832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 70
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:60967399-60967148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
154, 96
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr13:61976361-61976613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr13:21836915-21836664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 125
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr13:971283-971546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr13:21107745-21107486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr13:32550126-32550383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 123
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr13:33631767-33631502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr13:46524857-46525109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
155, 23
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr13:1346784-1346519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
154, 182
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr13:17820657-17820916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr13:42214752-42214490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
349-615
               

               
Cow position:
               
chr13:51902224-51901962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-617
               

               
Cow position:
               
chr13:9803673-9803407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
349-618
               

               
Cow position:
               
chr13:20561705-20561439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 19
               

               
Conread position:
               
349-619
               

               
Cow position:
               
chr13:7365836-7366106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 174
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr13:30306796-30307066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr13:31608056-31607787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:561006-560733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:1959767-1959493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 121
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:6664746-6664473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:20563597-20563328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:36352380-36352653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:38612596-38612865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr13:39911778-39912051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-624
               

               
Cow position:
               
chr13:20538189-20537920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 147
               

               
Conread position:
               
349-624
               

               
Cow position:
               
chr13:34262773-34263045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
349-624
               

               
Cow position:
               
chr13:57769416-57769688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 173
               

               
Conread position:
               
349-631
               

               
Cow position:
               
chr13:3650923-3650643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr13:37945617-37945900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
349-640
               

               
Cow position:
               
chr13:6078836-6079125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-651
               

               
Cow position:
               
chr13:21235081-21235385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr13:28131885-28132188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-654
               

               
Cow position:
               
chr13:4487235-4487535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-654
               

               
Cow position:
               
chr13:25882610-25882919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 174
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr13:43383815-43384025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
150, 177
               

               
Conread position:
               
350-565
               

               
Cow position:
               
chr13:46496281-46496066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
350-579
               

               
Cow position:
               
chr13:55604142-55603917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr13:46465834-46465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr13:60219474-60219710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
350-595
               

               
Cow position:
               
chr13:55406080-55406316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr13:7465714-7465460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr13:21126476-21126722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
152, 173
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr13:30505064-30504810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
350-606
               

               
Cow position:
               
chr13:60508523-60508770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
152, 65
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr13:14399692-14399437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr13:20181295-20181039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr13:31580207-31580463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr13:37520742-37520998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr13:46182379-46182125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 95
               

               
Conread position:
               
350-608
               

               
Cow position:
               
chr13:17496443-17496701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-608
               

               
Cow position:
               
chr13:39945858-39946110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr13:15622461-15622208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 181
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr13:37982108-37982383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
351-540
               

               
Cow position:
               
chr13:6442835-6443014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
351-544
               

               
Cow position:
               
chr13:19783147-19783339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr13:19451120-19451322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr13:41807357-41807156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
151, 85
               

               
Conread position:
               
351-558
               

               
Cow position:
               
chr13:61072010-61071809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
351-565
               

               
Cow position:
               
chr13:10859332-10859546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
149, 102
               

               
Conread position:
               
351-575
               

               
Cow position:
               
chr13:33522572-33522351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr13:11315934-11316171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 171
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr13:23266449-23266213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr13:37980080-37980315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr13:1368623-1368386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
351-601
               

               
Cow position:
               
chr13:706317-706566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 102
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr13:2137839-2137586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr13:7870180-7869927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 123
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr13:9537621-9537872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 108
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr13:19426104-19426344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr13:48627920-48628172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr13:11833976-11833724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
247, 65
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr13:20571337-20571078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr13:32961042-32961295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr13:42085420-42085159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
151, 172
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr13:47215640-47215901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
125, 177
               

               
Conread position:
               
351-610
               

               
Cow position:
               
chr13:53574605-53574348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
351-613
               

               
Cow position:
               
chr13:1442647-1442902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
351-620
               

               
Cow position:
               
chr13:2800268-2800536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr13:12618487-12618755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
352-475
               

               
Cow position:
               
chr13:2804832-2804709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
352-486
               

               
Cow position:
               
chr13:56149072-56148938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
352-486
               

               
Cow position:
               
chr13:56159895-56160029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
352-488
               

               
Cow position:
               
chr13:19321725-19321591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
352-510
               

               
Cow position:
               
chr13:40492037-40491878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
352-524
               

               
Cow position:
               
chr13:25891931-25892100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
352-525
               

               
Cow position:
               
chr13:24690898-24690726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
106, 79
               

               
Conread position:
               
352-527
               

               
Cow position:
               
chr13:34190622-34190788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
352-563
               

               
Cow position:
               
chr13:18852932-18852722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 170
               

               
Conread position:
               
352-580
               

               
Cow position:
               
chr13:1882130-1881903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
150, 171
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr13:17252586-17252352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
150, 103
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr13:47357222-47356966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
352-605
               

               
Cow position:
               
chr13:6553087-6552828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 174
               

               
Conread position:
               
352-605
               

               
Cow position:
               
chr13:60690112-60690365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
352-609
               

               
Cow position:
               
chr13:19393861-19393603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
352-610
               

               
Cow position:
               
chr13:24059725-24059982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 170
               

               
Conread position:
               
352-614
               

               
Cow position:
               
chr13:24371008-24370749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
353-502
               

               
Cow position:
               
chr13:995496-995642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
353-541
               

               
Cow position:
               
chr13:51854526-51854720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
353-578
               

               
Cow position:
               
chr13:36106897-36107122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr13:26024714-26024949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
353-595
               

               
Cow position:
               
chr13:24405311-24405070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 169
               

               
Conread position:
               
353-601
               

               
Cow position:
               
chr13:50112852-50113098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
149, 170
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr13:2557907-2558156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr13:38574755-38574506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr13:32825808-32826055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 121
               

               
Conread position:
               
353-610
               

               
Cow position:
               
chr13:45353626-45353379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
150, 114
               

               
Conread position:
               
353-610
               

               
Cow position:
               
chr13:47590540-47590794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
355-602
               

               
Cow position:
               
chr13:60616553-60616307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 168
               

               
Conread position:
               
355-607
               

               
Cow position:
               
chr13:18815345-18815090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
149, 94
               

               
Conread position:
               
356-544
               

               
Cow position:
               
chr13:62018463-62018649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
356-581
               

               
Cow position:
               
chr13:14315281-14315056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 167
               

               
Conread position:
               
356-588
               

               
Cow position:
               
chr13:36716728-36716957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
356-607
               

               
Cow position:
               
chr13:42114619-42114362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 157
               

               
Conread position:
               
357-607
               

               
Cow position:
               
chr13:9570615-9570369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
357-607
               

               
Cow position:
               
chr13:34282281-34282032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
359-556
               

               
Cow position:
               
chr13:16270570-16270374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
141, 163
               

               
Conread position:
               
364-610
               

               
Cow position:
               
chr13:42201259-42201013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
365-607
               

               
Cow position:
               
chr13:28413893-28413649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
366-526
               

               
Cow position:
               
chr13:32905488-32905332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
367-525
               

               
Cow position:
               
chr13:15282657-15282816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
367-588
               

               
Cow position:
               
chr13:11571280-11571057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 108
               

               
Conread position:
               
367-589
               

               
Cow position:
               
chr13:34375844-34375625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
367-589
               

               
Cow position:
               
chr13:48334239-48334456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
367-589
               

               
Cow position:
               
chr13:53535706-53535927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 156
               

               
Conread position:
               
367-590
               

               
Cow position:
               
chr13:20492202-20491980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr13:6602055-6602288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 155
               

               
Conread position:
               
367-605
               

               
Cow position:
               
chr13:22780578-22780343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
367-605
               

               
Cow position:
               
chr13:52275823-52276060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr13:22774711-22774948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
368-496
               

               
Cow position:
               
chr13:24754597-24754469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-589
               

               
Cow position:
               
chr13:21986702-21986921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 155
               

               
Conread position:
               
369-525
               

               
Cow position:
               
chr13:60393208-60393365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
369-544
               

               
Cow position:
               
chr13:17270847-17270673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
133, 153
               

               
Conread position:
               
369-588
               

               
Cow position:
               
chr13:32659233-32659014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 80
               

               
Conread position:
               
369-588
               

               
Cow position:
               
chr13:34658624-34658852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
369-602
               

               
Cow position:
               
chr13:20880066-20880297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 112
               

               
Conread position:
               
369-605
               

               
Cow position:
               
chr13:16807984-16808219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 154
               

               
Conread position:
               
369-607
               

               
Cow position:
               
chr13:46985600-46985368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 86
               

               
Conread position:
               
369-617
               

               
Cow position:
               
chr13:11767381-11767623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
371-538
               

               
Cow position:
               
chr13:35525462-35525626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
373-589
               

               
Cow position:
               
chr13:58718921-58719134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
373-607
               

               
Cow position:
               
chr13:20243158-20243390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
375-524
               

               
Cow position:
               
chr13:36396575-36396722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
375-589
               

               
Cow position:
               
chr13:46324208-46324421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
375-605
               

               
Cow position:
               
chr13:15869705-15869471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
375-652
               

               
Cow position:
               
chr13:23444222-23444502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
376-551
               

               
Cow position:
               
chr13:60639918-60640092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
376-577
               

               
Cow position:
               
chr13:42248958-42248753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
376-589
               

               
Cow position:
               
chr13:26382638-26382853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
376-617
               

               
Cow position:
               
chr13:19108499-19108262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
377-600
               

               
Cow position:
               
chr13:32016976-32017183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
377-605
               

               
Cow position:
               
chr13:38283399-38283630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
377-607
               

               
Cow position:
               
chr13:20377752-20377990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
378-526
               

               
Cow position:
               
chr13:54418987-54418838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
378-601
               

               
Cow position:
               
chr13:186090-185868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 145
               

               
Conread position:
               
379-605
               

               
Cow position:
               
chr13:14077280-14077053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
379-607
               

               
Cow position:
               
chr13:24156449-24156220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
379-622
               

               
Cow position:
               
chr13:22117183-22116939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
381-540
               

               
Cow position:
               
chr13:52558192-52558034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
381-558
               

               
Cow position:
               
chr13:19178857-19178681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
382-605
               

               
Cow position:
               
chr13:55371585-55371807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 141
               

               
Conread position:
               
386-539
               

               
Cow position:
               
chr13:25825588-25825432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
388-543
               

               
Cow position:
               
chr13:18985342-18985500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
388-589
               

               
Cow position:
               
chr13:46297891-46298084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
389-510
               

               
Cow position:
               
chr13:9108404-9108282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
389-538
               

               
Cow position:
               
chr13:58280568-58280717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
389-543
               

               
Cow position:
               
chr13:57497259-57497406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
389-589
               

               
Cow position:
               
chr13:1459038-1458840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
113, 134
               

               
Conread position:
               
389-603
               

               
Cow position:
               
chr13:21988543-21988749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr13:13329968-13330183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-607
               

               
Cow position:
               
chr13:17456702-17456917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
111, 133
               

               
Conread position:
               
389-610
               

               
Cow position:
               
chr13:19022814-19022596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 132
               

               
Conread position:
               
390-545
               

               
Cow position:
               
chr13:20566578-20566423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
394-605
               

               
Cow position:
               
chr13:59170120-59169910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 129
               

               
Conread position:
               
396-605
               

               
Cow position:
               
chr13:35761000-35761215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
396-616
               

               
Cow position:
               
chr13:49848439-49848210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
397-607
               

               
Cow position:
               
chr13:58742569-58742782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
398-593
               

               
Cow position:
               
chr13:34670406-34670210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
399-605
               

               
Cow position:
               
chr13:3970071-3970276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
399-607
               

               
Cow position:
               
chr13:13222881-13222674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
400-602
               

               
Cow position:
               
chr13:20440041-20440244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
400-607
               

               
Cow position:
               
chr13:25453722-25453522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
401-601
               

               
Cow position:
               
chr13:7297508-7297308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
403-607
               

               
Cow position:
               
chr13:11063052-11062848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
403-610
               

               
Cow position:
               
chr13:58389680-58389478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
404-607
               

               
Cow position:
               
chr13:19882494-19882687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
404-619
               

               
Cow position:
               
chr13:6539607-6539829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
405-589
               

               
Cow position:
               
chr13:32536207-32536025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
406-526
               

               
Cow position:
               
chr13:33876206-33876085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
406-544
               

               
Cow position:
               
chr13:18999220-18999083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 117
               

               
Conread position:
               
406-589
               

               
Cow position:
               
chr13:15946084-15945905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
406-601
               

               
Cow position:
               
chr13:37934610-37934413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr13:3165811-3166009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr13:3822649-3822452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr13:47547193-47547387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr13:49446195-49446393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-607
               

               
Cow position:
               
chr13:20175290-20175091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-610
               

               
Cow position:
               
chr13:13261565-13261364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
406-639
               

               
Cow position:
               
chr13:11826191-11825963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
406-640
               

               
Cow position:
               
chr13:42071519-42071279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
407-592
               

               
Cow position:
               
chr13:22024959-22025150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
407-605
               

               
Cow position:
               
chr13:53537263-53537066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
408-587
               

               
Cow position:
               
chr13:559948-560121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
411-607
               

               
Cow position:
               
chr13:37483716-37483914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
411-610
               

               
Cow position:
               
chr13:48164931-48165129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
411-622
               

               
Cow position:
               
chr13:33976215-33976007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
412-565
               

               
Cow position:
               
chr13:31757157-31757005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
413-605
               

               
Cow position:
               
chr13:46055712-46055521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
414-597
               

               
Cow position:
               
chr13:41360380-41360200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr13:6974718-6974517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
415-595
               

               
Cow position:
               
chr13:14104292-14104470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 100
               

               
Conread position:
               
415-607
               

               
Cow position:
               
chr13:52585481-52585673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
416-575
               

               
Cow position:
               
chr13:11687737-11687893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 103
               

               
Conread position:
               
416-589
               

               
Cow position:
               
chr13:47186916-47186744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
416-596
               

               
Cow position:
               
chr13:39593052-39593230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
416-601
               

               
Cow position:
               
chr13:26079982-26079810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
416-607
               

               
Cow position:
               
chr13:25434582-25434777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
417-580
               

               
Cow position:
               
chr13:57314545-57314706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
417-590
               

               
Cow position:
               
chr13:24629791-24629621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
417-607
               

               
Cow position:
               
chr13:43628171-43628366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
418-607
               

               
Cow position:
               
chr13:17567452-17567637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
419-578
               

               
Cow position:
               
chr13:14724487-14724644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
419-606
               

               
Cow position:
               
chr13:52058068-52057891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
420-613
               

               
Cow position:
               
chr13:35718081-35718271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
421-595
               

               
Cow position:
               
chr13:30694527-30694362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
423-607
               

               
Cow position:
               
chr13:31814394-31814217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 106
               

               
Conread position:
               
424-605
               

               
Cow position:
               
chr13:5229100-5228920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
424-605
               

               
Cow position:
               
chr13:22571095-22570900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
424-605
               

               
Cow position:
               
chr13:32221425-32221245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
425-609
               

               
Cow position:
               
chr13:889641-889819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
428-622
               

               
Cow position:
               
chr13:30794344-30794156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
430-605
               

               
Cow position:
               
chr13:33332877-33332703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
431-605
               

               
Cow position:
               
chr13:24695884-24695717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
431-605
               

               
Cow position:
               
chr13:33500209-33500038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
433-605
               

               
Cow position:
               
chr13:42040501-42040672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
433-610
               

               
Cow position:
               
chr13:52922626-52922451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
434-607
               

               
Cow position:
               
chr13:27027254-27027426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
434-610
               

               
Cow position:
               
chr13:5261828-5262001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
438-595
               

               
Cow position:
               
chr13:8961098-8960942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
438-605
               

               
Cow position:
               
chr13:2166100-2166266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
438-656
               

               
Cow position:
               
chr13:13177363-13177147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
439-589
               

               
Cow position:
               
chr13:6104064-6104212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
439-598
               

               
Cow position:
               
chr13:40722165-40722322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
439-603
               

               
Cow position:
               
chr13:41254145-41253981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
440-622
               

               
Cow position:
               
chr13:23856756-23856574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
442-605
               

               
Cow position:
               
chr13:50284719-50284557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
443-605
               

               
Cow position:
               
chr13:49612614-49612453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
444-614
               

               
Cow position:
               
chr13:20665875-20666043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
449-605
               

               
Cow position:
               
chr13:21675642-21675487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
451-588
               

               
Cow position:
               
chr13:12875267-12875402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
456-645
               

               
Cow position:
               
chr13:15288396-15288582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
460-607
               

               
Cow position:
               
chr13:54703334-54703188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
481-622
               

               
Cow position:
               
chr13:24099510-24099651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
487-607
               

               
Cow position:
               
chr13:3701903-3701783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 43
               
Show alignments to all cow chromosomes.