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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-47B13.5
        

               
Conread position:
               
280-606
               

               
Cow position:
               
chr17:24549517-24549842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
331-606
               

               
Cow position:
               
chr17:14249634-14249360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
341-541
               

               
Cow position:
               
chr17:17179461-17179662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 183
               

               
Conread position:
               
348-558
               

               
Cow position:
               
chr17:20078212-20078005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
348-562
               

               
Cow position:
               
chr17:158744-158956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
348-562
               

               
Cow position:
               
chr17:10843740-10843952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
155, 101
               

               
Conread position:
               
348-565
               

               
Cow position:
               
chr17:3155521-3155305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 175
               

               
Conread position:
               
348-598
               

               
Cow position:
               
chr17:22563607-22563854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
348-608
               

               
Cow position:
               
chr17:10270892-10271159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 183
               

               
Conread position:
               
348-614
               

               
Cow position:
               
chr17:23101788-23101526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
349-460
               

               
Cow position:
               
chr17:14266095-14266206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-485
               

               
Cow position:
               
chr17:12357608-12357473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
349-493
               

               
Cow position:
               
chr17:7142103-7142245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
349-506
               

               
Cow position:
               
chr17:15809456-15809614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr17:31099321-31099483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-519
               

               
Cow position:
               
chr17:43826789-43826619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
151, 117
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr17:20209407-20209228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr17:24293576-24293747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
349-527
               

               
Cow position:
               
chr17:2698997-2699174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
349-528
               

               
Cow position:
               
chr17:29079078-29079260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
349-533
               

               
Cow position:
               
chr17:33934350-33934164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
349-533
               

               
Cow position:
               
chr17:38985871-38985688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
154, 104
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr17:11382334-11382145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
349-538
               

               
Cow position:
               
chr17:22773990-22773801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 181
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr17:2657253-2657443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr17:13967093-13966903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr17:21716930-21717120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-541
               

               
Cow position:
               
chr17:3269736-3269928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
349-543
               

               
Cow position:
               
chr17:8450178-8450373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
349-543
               

               
Cow position:
               
chr17:20814787-20814979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
153, 107
               

               
Conread position:
               
349-543
               

               
Cow position:
               
chr17:29213091-29213282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
154, 132
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:3499530-3499336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:8067799-8067606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:16216898-16217090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:21646386-21646194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:24502975-24503169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr17:36281603-36281797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-545
               

               
Cow position:
               
chr17:4211400-4211592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 50
               

               
Conread position:
               
349-546
               

               
Cow position:
               
chr17:32531384-32531189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 173
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr17:2079096-2079304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 177
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr17:1784102-1783895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr17:8229763-8229965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
151, 173
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr17:16416623-16416422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
349-555
               

               
Cow position:
               
chr17:5380411-5380611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr17:18198849-18199065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr17:31781012-31780794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr17:35620044-35619826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr17:42382622-42382407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
153, 164
               

               
Conread position:
               
349-572
               

               
Cow position:
               
chr17:932847-933074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
349-574
               

               
Cow position:
               
chr17:18777368-18777144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr17:13716835-13716614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr17:16399822-16399596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr17:18099609-18099384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr17:33792546-33792773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 175
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr17:40085493-40085719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr17:728866-728635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr17:6155451-6155681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 181
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr17:9660861-9660632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr17:20215548-20215778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr17:30413421-30413651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-581
               

               
Cow position:
               
chr17:19889447-19889676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
349-581
               

               
Cow position:
               
chr17:25167718-25167949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-583
               

               
Cow position:
               
chr17:36747054-36746820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 175
               

               
Conread position:
               
349-585
               

               
Cow position:
               
chr17:27679836-27679603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
153, 77
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr17:15364141-15363913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr17:31924355-31924120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr17:18036555-18036317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 144
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr17:29898049-29898282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:2006115-2006349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:6995711-6995945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:11654627-11654855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:12477333-12477569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:13688738-13688498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:14304283-14304050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:15701241-15701001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 175
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr17:18814615-18814852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
151, 106
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr17:241754-241995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr17:13237306-13237070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-594
               

               
Cow position:
               
chr17:33272245-33272001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr17:41892912-41892683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr17:27686029-27685787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
349-597
               

               
Cow position:
               
chr17:2033962-2034209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
349-600
               

               
Cow position:
               
chr17:36265814-36265565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:148376-148627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:5281883-5281632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:8212522-8212773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:20093696-20093454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
154, 80
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:21181955-21182206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr17:36284735-36284986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr17:1970619-1970874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr17:2081418-2081669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 64
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr17:7615223-7614979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 138
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr17:20807944-20808197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
157, 172
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr17:16904047-16904299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr17:20271933-20271686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 100
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr17:24618245-24618496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr17:4457700-4457961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 181
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr17:20361338-20361085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr17:29950972-29951223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr17:40802233-40802483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:139083-139338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:184615-184869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:400147-399892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:731030-730776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:997712-997471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:1708290-1708031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:1709811-1710066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:2201765-2202020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:2265656-2265911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:2584119-2584373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:3197164-3196914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:3652259-3652004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:4063796-4064048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:4152800-4152551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:4480415-4480160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:4635191-4634934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:5211353-5211093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:5549083-5548828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:5638424-5638169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:5734019-5733759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:5806021-5805768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:6123251-6123506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:6612490-6612745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:6956107-6956362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:7396821-7396571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:8223174-8223426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:8993873-8993618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:9663285-9663030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:10494471-10494216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:11677769-11677514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:11786392-11786646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:12856717-12856974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
20, 176
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:13458477-13458222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:14021997-14021747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:14027961-14027704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
63, 162
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:14212552-14212298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:14243300-14243553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:15093994-15093739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:15118284-15118539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:15439259-15439512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 111
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:15559040-15559295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:15894888-15894635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:16505278-16505023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:16700009-16699754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:17240549-17240293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 251
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:17259695-17259950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:17493759-17494013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 121
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:17958064-17958319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:18123123-18122868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:18828674-18828420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 183
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:19214942-19214687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:20232314-20232059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:20391242-20391497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:20546605-20546860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:21666467-21666722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:22248784-22248530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:23320952-23320699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:24026518-24026262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:25834885-25835140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:26829276-26829023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 116
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:27791324-27791072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:31671432-31671177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:31986733-31986478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:34191515-34191260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:34235783-34235527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:34564814-34565069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:35437511-35437766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:36504606-36504355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:37528280-37528025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:39823726-39823471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:39844098-39844353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:43471123-43470868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:43539471-43539726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:43726094-43725840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 80
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr17:43991952-43992207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 172
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:6623101-6623357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:10445625-10445877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:15351518-15351774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:19998559-19998809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 167
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:20226069-20226325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:21973713-21973458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:24534471-24534726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:30727691-30727947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 173
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:36313455-36313715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr17:36317509-36317770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:50645-50390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:907768-908023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 85
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:1280760-1281016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 132
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:8205402-8205657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:9905813-9906075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:12290001-12289745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 124
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:13144257-13144008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:16463693-16463441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:17221765-17222019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:18591868-18592111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:20358298-20358553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 119
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:20779938-20780193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:20847957-20848210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:22774807-22775065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:26803397-26803142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 88
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:29824492-29824235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:31232522-31232266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:33289233-33288980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:34208696-34208441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 93
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:35180219-35180480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 164
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:37415448-37415193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
153, 99
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:38992220-38992477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr17:42843469-42843726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr17:21767367-21767617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr17:29041324-29041065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
96, 181
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr17:1568754-1568493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr17:3306053-3306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 137
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr17:11385921-11386193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr17:43527397-43527660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
349-612
               

               
Cow position:
               
chr17:1884170-1884440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr17:36331536-36331281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
349-616
               

               
Cow position:
               
chr17:34317296-34317034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
349-618
               

               
Cow position:
               
chr17:15328748-15329014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr17:11083671-11083402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr17:13725730-13725999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 125
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:2177438-2177713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:4107595-4107326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:4123331-4123062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:21115789-21115514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 176
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:28830707-28830974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
245, 117
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr17:41014628-41014904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 141
               

               
Conread position:
               
349-624
               

               
Cow position:
               
chr17:29471898-29472175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-633
               

               
Cow position:
               
chr17:18472646-18472919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
349-636
               

               
Cow position:
               
chr17:11913283-11912997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr17:2270180-2270474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr17:5896494-5896206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 125
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr17:17453186-17452909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr17:18884908-18884619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 174
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr17:20800231-20800522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 176
               

               
Conread position:
               
349-640
               

               
Cow position:
               
chr17:16854640-16854351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-642
               

               
Cow position:
               
chr17:979720-979425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
349-644
               

               
Cow position:
               
chr17:29156849-29157142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr17:1456823-1456519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr17:28359244-28359550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 171
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr17:40393446-40393745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
349-654
               

               
Cow position:
               
chr17:32651033-32651335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 175
               

               
Conread position:
               
349-668
               

               
Cow position:
               
chr17:15228361-15228044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
350-502
               

               
Cow position:
               
chr17:3041696-3041847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
350-532
               

               
Cow position:
               
chr17:2534374-2534557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
350-538
               

               
Cow position:
               
chr17:1104944-1105132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
83, 171
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr17:2179297-2179490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
350-563
               

               
Cow position:
               
chr17:17478588-17478800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
350-572
               

               
Cow position:
               
chr17:42663111-42662894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
350-591
               

               
Cow position:
               
chr17:39484976-39485210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
350-593
               

               
Cow position:
               
chr17:39735602-39735840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr17:40811185-40811439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
350-606
               

               
Cow position:
               
chr17:5899105-5898853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr17:8995970-8995714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 165
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr17:13940899-13940646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 173
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr17:24823683-24823938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
351-538
               

               
Cow position:
               
chr17:923091-923277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
151, 172
               

               
Conread position:
               
351-564
               

               
Cow position:
               
chr17:19405839-19405624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
351-579
               

               
Cow position:
               
chr17:36817336-36817553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 112
               

               
Conread position:
               
351-581
               

               
Cow position:
               
chr17:23146906-23147131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
351-588
               

               
Cow position:
               
chr17:41024228-41024464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
151, 93
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr17:13424726-13424981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr17:28155889-28155636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr17:40771244-40771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
152, 168
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr17:3131477-3131735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr17:5767322-5767575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr17:23337590-23337340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
351-610
               

               
Cow position:
               
chr17:5695523-5695265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 170
               

               
Conread position:
               
351-618
               

               
Cow position:
               
chr17:18201192-18201460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 176
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr17:11638306-11638576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr17:14232143-14231862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 164
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr17:27978572-27978847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr17:44030012-44030283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
351-642
               

               
Cow position:
               
chr17:29079813-29080085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
351-652
               

               
Cow position:
               
chr17:28539460-28539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 161
               

               
Conread position:
               
352-580
               

               
Cow position:
               
chr17:17133942-17134167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
352-595
               

               
Cow position:
               
chr17:20591633-20591876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 101
               

               
Conread position:
               
352-595
               

               
Cow position:
               
chr17:36220977-36221210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
352-605
               

               
Cow position:
               
chr17:6263325-6263580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 234
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr17:14034240-14033973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr17:29083635-29083880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
242, 153
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr17:38829498-38829758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
352-617
               

               
Cow position:
               
chr17:5748389-5748124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
150, 170
               

               
Conread position:
               
352-622
               

               
Cow position:
               
chr17:30910-31183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 174
               

               
Conread position:
               
353-595
               

               
Cow position:
               
chr17:44233662-44233422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 169
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr17:28024419-28024169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 170
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr17:33059136-33058886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr17:25542385-25542138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 169
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr17:32977775-32977524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 114
               

               
Conread position:
               
353-622
               

               
Cow position:
               
chr17:16118005-16117741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
354-624
               

               
Cow position:
               
chr17:42258328-42258595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
355-607
               

               
Cow position:
               
chr17:16447008-16446757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
356-580
               

               
Cow position:
               
chr17:18242412-18242626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
357-580
               

               
Cow position:
               
chr17:15187826-15187608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
357-606
               

               
Cow position:
               
chr17:5892368-5892132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 98
               

               
Conread position:
               
358-595
               

               
Cow position:
               
chr17:3139246-3139477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
358-602
               

               
Cow position:
               
chr17:29074911-29074672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
358-654
               

               
Cow position:
               
chr17:24109754-24109456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 166
               

               
Conread position:
               
359-605
               

               
Cow position:
               
chr17:11471336-11471579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
361-624
               

               
Cow position:
               
chr17:12539624-12539366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
366-607
               

               
Cow position:
               
chr17:30664711-30664949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
366-655
               

               
Cow position:
               
chr17:21807385-21807083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
367-525
               

               
Cow position:
               
chr17:6848338-6848498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
367-544
               

               
Cow position:
               
chr17:13921719-13921890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
367-605
               

               
Cow position:
               
chr17:19377665-19377428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr17:6565914-6566153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr17:22057722-22057499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr17:29715749-29715512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
367-662
               

               
Cow position:
               
chr17:29810087-29810380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
368-510
               

               
Cow position:
               
chr17:38617147-38617288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
368-605
               

               
Cow position:
               
chr17:24031284-24031520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
158, 127
               

               
Conread position:
               
369-544
               

               
Cow position:
               
chr17:5042708-5042531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
369-589
               

               
Cow position:
               
chr17:21924202-21923980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
369-605
               

               
Cow position:
               
chr17:23884327-23884094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
369-605
               

               
Cow position:
               
chr17:36790546-36790781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 154
               

               
Conread position:
               
369-616
               

               
Cow position:
               
chr17:20129115-20129360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
371-589
               

               
Cow position:
               
chr17:33534992-33534777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
371-609
               

               
Cow position:
               
chr17:6081986-6082223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 151
               

               
Conread position:
               
372-565
               

               
Cow position:
               
chr17:18070200-18070392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 150
               

               
Conread position:
               
372-594
               

               
Cow position:
               
chr17:38759310-38759092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
127, 102
               

               
Conread position:
               
372-605
               

               
Cow position:
               
chr17:6072019-6072250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
372-613
               

               
Cow position:
               
chr17:38675-38910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
373-630
               

               
Cow position:
               
chr17:4602098-4601846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
374-569
               

               
Cow position:
               
chr17:14088922-14088728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
131, 149
               

               
Conread position:
               
375-511
               

               
Cow position:
               
chr17:3781275-3781408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
375-594
               

               
Cow position:
               
chr17:40879263-40879484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 146
               

               
Conread position:
               
376-603
               

               
Cow position:
               
chr17:21874873-21874646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 147
               

               
Conread position:
               
378-605
               

               
Cow position:
               
chr17:24553451-24553677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
379-605
               

               
Cow position:
               
chr17:7584917-7585142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
379-607
               

               
Cow position:
               
chr17:14051679-14051454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 144
               

               
Conread position:
               
379-607
               

               
Cow position:
               
chr17:16869806-16869594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
380-614
               

               
Cow position:
               
chr17:24334135-24334368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 143
               

               
Conread position:
               
381-605
               

               
Cow position:
               
chr17:36197070-36197293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
381-617
               

               
Cow position:
               
chr17:40741058-40741293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
382-599
               

               
Cow position:
               
chr17:8644393-8644619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
382-628
               

               
Cow position:
               
chr17:17626888-17627133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
387-540
               

               
Cow position:
               
chr17:453332-453483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
116, 5
               

               
Conread position:
               
388-607
               

               
Cow position:
               
chr17:32280417-32280202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
389-537
               

               
Cow position:
               
chr17:43082763-43082908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
389-565
               

               
Cow position:
               
chr17:25145855-25145680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 133
               

               
Conread position:
               
389-582
               

               
Cow position:
               
chr17:35388560-35388371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
389-597
               

               
Cow position:
               
chr17:20360230-20360439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
389-603
               

               
Cow position:
               
chr17:31481407-31481609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
389-604
               

               
Cow position:
               
chr17:5554007-5553793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr17:18564302-18564087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr17:24785842-24786057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-607
               

               
Cow position:
               
chr17:20233693-20233901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 131
               

               
Conread position:
               
389-617
               

               
Cow position:
               
chr17:8926778-8926552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
116, 133
               

               
Conread position:
               
390-539
               

               
Cow position:
               
chr17:11035152-11035297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
390-602
               

               
Cow position:
               
chr17:12059633-12059423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
390-605
               

               
Cow position:
               
chr17:10009106-10008892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 133
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr17:20269074-20269293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
391-607
               

               
Cow position:
               
chr17:6967517-6967297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
111, 131
               

               
Conread position:
               
391-607
               

               
Cow position:
               
chr17:35287881-35287669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
393-580
               

               
Cow position:
               
chr17:20082401-20082216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
393-609
               

               
Cow position:
               
chr17:20912065-20912281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 136
               

               
Conread position:
               
393-609
               

               
Cow position:
               
chr17:33040096-33039879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
396-652
               

               
Cow position:
               
chr17:30539785-30539532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr17:15854266-15854442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
397-607
               

               
Cow position:
               
chr17:1672277-1672079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
398-604
               

               
Cow position:
               
chr17:8221830-8222034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
398-605
               

               
Cow position:
               
chr17:12326405-12326198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
398-607
               

               
Cow position:
               
chr17:3352854-3353062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
399-607
               

               
Cow position:
               
chr17:3388333-3388534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
400-567
               

               
Cow position:
               
chr17:44561601-44561434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 121
               

               
Conread position:
               
402-601
               

               
Cow position:
               
chr17:16216455-16216252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
403-541
               

               
Cow position:
               
chr17:23880331-23880194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
403-606
               

               
Cow position:
               
chr17:14026430-14026228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
403-607
               

               
Cow position:
               
chr17:15334249-15334046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
406-526
               

               
Cow position:
               
chr17:14050707-14050587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
406-540
               

               
Cow position:
               
chr17:10318820-10318687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-562
               

               
Cow position:
               
chr17:15244611-15244454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-595
               

               
Cow position:
               
chr17:25740417-25740604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr17:16875879-16876077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr17:19317438-19317636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr17:22087147-22087345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr17:23679679-23679885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 197
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr17:31076855-31077053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-608
               

               
Cow position:
               
chr17:38363789-38363584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
406-611
               

               
Cow position:
               
chr17:18721098-18720898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
407-605
               

               
Cow position:
               
chr17:8673584-8673781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr17:3470906-3471105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr17:38832534-38832728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
413-605
               

               
Cow position:
               
chr17:8213769-8213960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
413-639
               

               
Cow position:
               
chr17:34391079-34390855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
413-653
               

               
Cow position:
               
chr17:21756473-21756234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
414-589
               

               
Cow position:
               
chr17:9819026-9818852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
415-589
               

               
Cow position:
               
chr17:37774083-37773909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
416-539
               

               
Cow position:
               
chr17:9698462-9698340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
416-564
               

               
Cow position:
               
chr17:31535079-31535224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
416-565
               

               
Cow position:
               
chr17:42284317-42284171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
417-563
               

               
Cow position:
               
chr17:9748256-9748398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
417-564
               

               
Cow position:
               
chr17:20091110-20090964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
417-589
               

               
Cow position:
               
chr17:18863121-18863291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
420-622
               

               
Cow position:
               
chr17:21960199-21959988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
421-601
               

               
Cow position:
               
chr17:11102301-11102121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
422-595
               

               
Cow position:
               
chr17:27698212-27698037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
423-605
               

               
Cow position:
               
chr17:21439376-21439555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
423-605
               

               
Cow position:
               
chr17:41029439-41029624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
425-605
               

               
Cow position:
               
chr17:15992129-15992308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
426-605
               

               
Cow position:
               
chr17:40405801-40405979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
426-607
               

               
Cow position:
               
chr17:27305659-27305837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
428-605
               

               
Cow position:
               
chr17:9176186-9176011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
430-605
               

               
Cow position:
               
chr17:19370909-19370735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
432-603
               

               
Cow position:
               
chr17:5899872-5900055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
433-590
               

               
Cow position:
               
chr17:33370716-33370560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
433-639
               

               
Cow position:
               
chr17:9900629-9900833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
434-589
               

               
Cow position:
               
chr17:13673927-13673776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
436-595
               

               
Cow position:
               
chr17:25341030-25340873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
438-652
               

               
Cow position:
               
chr17:39783475-39783683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
438-655
               

               
Cow position:
               
chr17:35223055-35223269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
439-595
               

               
Cow position:
               
chr17:13989732-13989578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
440-622
               

               
Cow position:
               
chr17:26230447-26230629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
442-607
               

               
Cow position:
               
chr17:10529235-10529070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
443-607
               

               
Cow position:
               
chr17:30712551-30712714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
445-591
               

               
Cow position:
               
chr17:5361544-5361399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
449-607
               

               
Cow position:
               
chr17:11216364-11216206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
449-609
               

               
Cow position:
               
chr17:22135016-22135175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr17:1061769-1061606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
451-580
               

               
Cow position:
               
chr17:25344550-25344424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
451-639
               

               
Cow position:
               
chr17:25140771-25140959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
452-607
               

               
Cow position:
               
chr17:21362932-21363085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
455-645
               

               
Cow position:
               
chr17:29292853-29292658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
460-607
               

               
Cow position:
               
chr17:23245311-23245458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
464-607
               

               
Cow position:
               
chr17:32472298-32472156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
469-607
               

               
Cow position:
               
chr17:24799212-24799076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
470-604
               

               
Cow position:
               
chr17:21038820-21038952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
473-639
               

               
Cow position:
               
chr17:32989036-32989199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
473-639
               

               
Cow position:
               
chr17:32994070-32993907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 57
               
Show alignments to all cow chromosomes.