Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig2-47B13.5
        

               Conread position:
               297-613
               

               Cow position:
               chr21:43598813-43599119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               329-607
               

               Cow position:
               chr21:33209627-33209896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               330-606
               

               Cow position:
               chr21:26829812-26829539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               173, 12
               

               Conread position:
               333-605
               

               Cow position:
               chr21:18935197-18935467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               172, 148
               

               Conread position:
               335-607
               

               Cow position:
               chr21:17695042-17694770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 186
               

               Conread position:
               335-628
               

               Cow position:
               chr21:18846391-18846104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 51
               

               Conread position:
               338-602
               

               Cow position:
               chr21:20588460-20588723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 185
               

               Conread position:
               339-607
               

               Cow position:
               chr21:24111194-24110931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               345-603
               

               Cow position:
               chr21:17713752-17714006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               159, 56
               

               Conread position:
               346-526
               

               Cow position:
               chr21:40267670-40267490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               158, 92
               

               Conread position:
               347-526
               

               Cow position:
               chr21:48108406-48108228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               155, 59
               

               Conread position:
               348-491
               

               Cow position:
               chr21:26697662-26697806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               348-565
               

               Cow position:
               chr21:24887410-24887633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               348-575
               

               Cow position:
               chr21:37942246-37942024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 135
               

               Conread position:
               348-595
               

               Cow position:
               chr21:7156146-7156389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               156, 15
               

               Conread position:
               348-598
               

               Cow position:
               chr21:4567711-4567973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               152, 107
               

               Conread position:
               348-607
               

               Cow position:
               chr21:29855113-29855371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 181
               

               Conread position:
               348-607
               

               Cow position:
               chr21:48638302-48638049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 101
               

               Conread position:
               349-452
               

               Cow position:
               chr21:2419963-2420066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-477
               

               Cow position:
               chr21:4035522-4035396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               349-477
               

               Cow position:
               chr21:4541417-4541289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-484
               

               Cow position:
               chr21:17415727-17415593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               349-485
               

               Cow position:
               chr21:10668573-10668437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-490
               

               Cow position:
               chr21:36534444-36534303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-493
               

               Cow position:
               chr21:33934144-33934000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-494
               

               Cow position:
               chr21:36376750-36376895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-496
               

               Cow position:
               chr21:26633460-26633313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-501
               

               Cow position:
               chr21:32191505-32191657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-506
               

               Cow position:
               chr21:28881553-28881710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               349-508
               

               Cow position:
               chr21:28908371-28908214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 100
               

               Conread position:
               349-510
               

               Cow position:
               chr21:28915206-28915045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               155, 57
               

               Conread position:
               349-510
               

               Cow position:
               chr21:36506069-36505910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               154, 14
               

               Conread position:
               349-513
               

               Cow position:
               chr21:25480041-25480206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               349-524
               

               Cow position:
               chr21:33964962-33964795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               349-525
               

               Cow position:
               chr21:17478184-17478362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               349-525
               

               Cow position:
               chr21:30296388-30296565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               349-525
               

               Cow position:
               chr21:47168731-47168908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               349-526
               

               Cow position:
               chr21:29500304-29500480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 73
               

               Conread position:
               349-526
               

               Cow position:
               chr21:44566281-44566103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               349-529
               

               Cow position:
               chr21:4898203-4898022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               349-535
               

               Cow position:
               chr21:21919256-21919445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               349-538
               

               Cow position:
               chr21:5596547-5596731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               349-540
               

               Cow position:
               chr21:34159333-34159517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               349-540
               

               Cow position:
               chr21:45446433-45446622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 79
               

               Conread position:
               349-541
               

               Cow position:
               chr21:23448982-23449173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               154, 173
               

               Conread position:
               349-541
               

               Cow position:
               chr21:30566461-30566652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-542
               

               Cow position:
               chr21:4123875-4123683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               349-542
               

               Cow position:
               chr21:28028402-28028590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 125
               

               Conread position:
               349-543
               

               Cow position:
               chr21:13315231-13315424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               154, 124
               

               Conread position:
               349-543
               

               Cow position:
               chr21:17413497-17413300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 168
               

               Conread position:
               349-543
               

               Cow position:
               chr21:18933723-18933919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 116
               

               Conread position:
               349-543
               

               Cow position:
               chr21:22318117-22318316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               349-543
               

               Cow position:
               chr21:39417841-39418035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 182
               

               Conread position:
               349-543
               

               Cow position:
               chr21:48291587-48291399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               349-544
               

               Cow position:
               chr21:23586082-23586281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               349-544
               

               Cow position:
               chr21:30354618-30354809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               349-544
               

               Cow position:
               chr21:32573922-32574119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 176
               

               Conread position:
               349-545
               

               Cow position:
               chr21:9567562-9567758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               140, 175
               

               Conread position:
               349-549
               

               Cow position:
               chr21:39077449-39077250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               153, 41
               

               Conread position:
               349-556
               

               Cow position:
               chr21:32396283-32396075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               349-557
               

               Cow position:
               chr21:17370790-17370583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-558
               

               Cow position:
               chr21:13739204-13739423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 182
               

               Conread position:
               349-558
               

               Cow position:
               chr21:44824105-44823896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 176
               

               Conread position:
               349-560
               

               Cow position:
               chr21:31690936-31691146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 181
               

               Conread position:
               349-564
               

               Cow position:
               chr21:33997782-33997571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               153, 138
               

               Conread position:
               349-565
               

               Cow position:
               chr21:2875223-2875014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               349-565
               

               Cow position:
               chr21:25674290-25674504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               349-565
               

               Cow position:
               chr21:27521926-27521715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               349-565
               

               Cow position:
               chr21:31435797-31436012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-575
               

               Cow position:
               chr21:18285575-18285794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               349-575
               

               Cow position:
               chr21:31040065-31039840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-578
               

               Cow position:
               chr21:22098010-22098227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               349-578
               

               Cow position:
               chr21:27065829-27065602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               349-578
               

               Cow position:
               chr21:29484404-29484633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 167
               

               Conread position:
               349-578
               

               Cow position:
               chr21:31706510-31706741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 107
               

               Conread position:
               349-578
               

               Cow position:
               chr21:32535431-32535653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               349-578
               

               Cow position:
               chr21:43403668-43403440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-579
               

               Cow position:
               chr21:32238109-32238338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               349-580
               

               Cow position:
               chr21:9011725-9011502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               151, 53
               

               Conread position:
               349-580
               

               Cow position:
               chr21:31974912-31975142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               156, 181
               

               Conread position:
               349-581
               

               Cow position:
               chr21:5009699-5009471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               349-582
               

               Cow position:
               chr21:38186-38416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               349-587
               

               Cow position:
               chr21:5898969-5898733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 57
               

               Conread position:
               349-588
               

               Cow position:
               chr21:7227591-7227349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 186
               

               Conread position:
               349-588
               

               Cow position:
               chr21:12440394-12440628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               349-588
               

               Cow position:
               chr21:24697918-24698154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               349-588
               

               Cow position:
               chr21:25344322-25344556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               349-589
               

               Cow position:
               chr21:1717564-1717805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               151, 222
               

               Conread position:
               349-589
               

               Cow position:
               chr21:4079784-4080033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               349-589
               

               Cow position:
               chr21:9201627-9201866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               151, 174
               

               Conread position:
               349-589
               

               Cow position:
               chr21:13090032-13089794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-589
               

               Cow position:
               chr21:20910661-20910424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               156, 14
               

               Conread position:
               349-589
               

               Cow position:
               chr21:29253447-29253208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               153, 190
               

               Conread position:
               349-589
               

               Cow position:
               chr21:29942438-29942675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 80
               

               Conread position:
               349-589
               

               Cow position:
               chr21:32814370-32814136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               151, 14
               

               Conread position:
               349-589
               

               Cow position:
               chr21:33307738-33307968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               153, 19
               

               Conread position:
               349-589
               

               Cow position:
               chr21:34738957-34739195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               154, 61
               

               Conread position:
               349-589
               

               Cow position:
               chr21:36657009-36657253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               349-589
               

               Cow position:
               chr21:37508797-37508562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               349-589
               

               Cow position:
               chr21:38907979-38908217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               349-590
               

               Cow position:
               chr21:4719050-4718810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-590
               

               Cow position:
               chr21:19436963-19436724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               146, 172
               

               Conread position:
               349-591
               

               Cow position:
               chr21:24947665-24947424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               349-594
               

               Cow position:
               chr21:665748-665514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               156, 100
               

               Conread position:
               349-594
               

               Cow position:
               chr21:24606847-24607080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 87
               

               Conread position:
               349-595
               

               Cow position:
               chr21:37322855-37322612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               349-595
               

               Cow position:
               chr21:40479031-40479276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-595
               

               Cow position:
               chr21:45331531-45331288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 164
               

               Conread position:
               349-596
               

               Cow position:
               chr21:49646892-49646651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               151, 74
               

               Conread position:
               349-597
               

               Cow position:
               chr21:17483037-17483283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 133
               

               Conread position:
               349-598
               

               Cow position:
               chr21:471059-471312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               70, 178
               

               Conread position:
               349-598
               

               Cow position:
               chr21:42464395-42464159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               349-601
               

               Cow position:
               chr21:1058241-1058490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               349-601
               

               Cow position:
               chr21:11083184-11082934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               153, 73
               

               Conread position:
               349-601
               

               Cow position:
               chr21:21967761-21968013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               349-601
               

               Cow position:
               chr21:23500561-23500320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               153, 41
               

               Conread position:
               349-601
               

               Cow position:
               chr21:28989053-28989303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               349-601
               

               Cow position:
               chr21:33728876-33729125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               154, 106
               

               Conread position:
               349-601
               

               Cow position:
               chr21:44331845-44331600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               151, 13
               

               Conread position:
               349-602
               

               Cow position:
               chr21:3586130-3585883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 161
               

               Conread position:
               349-602
               

               Cow position:
               chr21:15545921-15545670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 137
               

               Conread position:
               349-602
               

               Cow position:
               chr21:20576017-20575768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 63
               

               Conread position:
               349-602
               

               Cow position:
               chr21:28617049-28617294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               349-602
               

               Cow position:
               chr21:28810814-28810563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 101
               

               Conread position:
               349-603
               

               Cow position:
               chr21:725448-725196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               349-603
               

               Cow position:
               chr21:3782542-3782793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 106
               

               Conread position:
               349-603
               

               Cow position:
               chr21:12075962-12075714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               349-603
               

               Cow position:
               chr21:18601112-18601353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 23
               

               Conread position:
               349-603
               

               Cow position:
               chr21:22856619-22856872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 175
               

               Conread position:
               349-603
               

               Cow position:
               chr21:28511982-28512234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 82
               

               Conread position:
               349-604
               

               Cow position:
               chr21:5840611-5840867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 176
               

               Conread position:
               349-604
               

               Cow position:
               chr21:7198164-7197913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               349-604
               

               Cow position:
               chr21:11292476-11292732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               154, 240
               

               Conread position:
               349-604
               

               Cow position:
               chr21:22855663-22855916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 19
               

               Conread position:
               349-604
               

               Cow position:
               chr21:27375891-27376143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 121
               

               Conread position:
               349-604
               

               Cow position:
               chr21:36296940-36297190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               349-605
               

               Cow position:
               chr21:47913-48168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:149916-150171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:451650-451899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               151, 50
               

               Conread position:
               349-605
               

               Cow position:
               chr21:750179-750433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 21
               

               Conread position:
               349-605
               

               Cow position:
               chr21:1196307-1196562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 104
               

               Conread position:
               349-605
               

               Cow position:
               chr21:1752159-1752415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:2366788-2367036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               349-605
               

               Cow position:
               chr21:2878072-2877817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:3496736-3496482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:3814027-3813772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 173
               

               Conread position:
               349-605
               

               Cow position:
               chr21:3818550-3818806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               117, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:3923681-3923937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:4812572-4812309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               64, 182
               

               Conread position:
               349-605
               

               Cow position:
               chr21:5020908-5021163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:5237848-5238101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 74
               

               Conread position:
               349-605
               

               Cow position:
               chr21:5642067-5641813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 64
               

               Conread position:
               349-605
               

               Cow position:
               chr21:7038423-7038168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:7047415-7047162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 160
               

               Conread position:
               349-605
               

               Cow position:
               chr21:7524887-7525142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               349-605
               

               Cow position:
               chr21:7597501-7597246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:7666616-7666361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:9209077-9209331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               349-605
               

               Cow position:
               chr21:10075494-10075239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:10571040-10571295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:10756681-10756936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:10854026-10854281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:11144080-11143825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:13070423-13070165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               154, 27
               

               Conread position:
               349-605
               

               Cow position:
               chr21:13111357-13111102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:13735392-13735137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:13764419-13764676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 133
               

               Conread position:
               349-605
               

               Cow position:
               chr21:16575677-16575422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:16890074-16889819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               153, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:17144586-17144843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 176
               

               Conread position:
               349-605
               

               Cow position:
               chr21:17454844-17455098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               63, 138
               

               Conread position:
               349-605
               

               Cow position:
               chr21:18574284-18574539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:18818878-18818638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               151, 36
               

               Conread position:
               349-605
               

               Cow position:
               chr21:19351091-19350837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:19614014-19614268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:19626940-19626685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:21103488-21103743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:21623854-21624109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:23329573-23329317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:23341421-23341676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:23606112-23606369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 62
               

               Conread position:
               349-605
               

               Cow position:
               chr21:25598434-25598689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:25738430-25738182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 125
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26400016-26399760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               92, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26628537-26628792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               151, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26744517-26744262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26756953-26756700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26854923-26854668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:26875361-26875616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               151, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:27147782-27147529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               349-605
               

               Cow position:
               chr21:27607923-27607668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:27619750-27619495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:30571310-30571055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:30595321-30595056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               349-605
               

               Cow position:
               chr21:30655409-30655664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:30966173-30965917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:31950183-31950438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:33107724-33107469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:33316596-33316340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:33709730-33709475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:33770447-33770702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:34074407-34074662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:34181435-34181690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:34301350-34301601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 87
               

               Conread position:
               349-605
               

               Cow position:
               chr21:36780895-36781150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:36892462-36892207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               131, 125
               

               Conread position:
               349-605
               

               Cow position:
               chr21:37923946-37924208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               349-605
               

               Cow position:
               chr21:39429390-39429643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               153, 47
               

               Conread position:
               349-605
               

               Cow position:
               chr21:39469995-39469740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:39486504-39486249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               113, 106
               

               Conread position:
               349-605
               

               Cow position:
               chr21:41795955-41795699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               135, 175
               

               Conread position:
               349-605
               

               Cow position:
               chr21:42443167-42442912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               155, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:44122495-44122750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-605
               

               Cow position:
               chr21:47140252-47139998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               154, 106
               

               Conread position:
               349-605
               

               Cow position:
               chr21:47429112-47429365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               154, 14
               

               Conread position:
               349-605
               

               Cow position:
               chr21:47649111-47649365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               349-605
               

               Cow position:
               chr21:47978037-47978292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-606
               

               Cow position:
               chr21:8274738-8274486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               84, 147
               

               Conread position:
               349-606
               

               Cow position:
               chr21:18850958-18850698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               349-606
               

               Cow position:
               chr21:31276175-31276416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               153, 64
               

               Conread position:
               349-607
               

               Cow position:
               chr21:363089-363352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 178
               

               Conread position:
               349-607
               

               Cow position:
               chr21:1463682-1463930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 31
               

               Conread position:
               349-607
               

               Cow position:
               chr21:2293414-2293164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               34, 84
               

               Conread position:
               349-607
               

               Cow position:
               chr21:2514617-2514871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               349-607
               

               Cow position:
               chr21:2927792-2927537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-607
               

               Cow position:
               chr21:3765998-3765743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               109, 175
               

               Conread position:
               349-607
               

               Cow position:
               chr21:4585907-4585652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               349-607
               

               Cow position:
               chr21:4732774-4732520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               155, 111
               

               Conread position:
               349-607
               

               Cow position:
               chr21:4905527-4905270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               349-607
               

               Cow position:
               chr21:5595106-5595361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               349-607
               

               Cow position:
               chr21:9363605-9363341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 174
               

               Conread position:
               349-607
               

               Cow position:
               chr21:12153581-12153830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               349-607
               

               Cow position:
               chr21:17459281-17459028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 194
               

               Conread position:
               349-607
               

               Cow position:
               chr21:18289104-18289360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-607
               

               Cow position:
               chr21:18939946-18939689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 103
               

               Conread position:
               349-607
               

               Cow position:
               chr21:20262896-20262637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               349-607
               

               Cow position:
               chr21:21076576-21076825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               349-607
               

               Cow position:
               chr21:21971489-21971233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 182
               

               Conread position:
               349-607
               

               Cow position:
               chr21:22719332-22719083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 117
               

               Conread position:
               349-607
               

               Cow position:
               chr21:23293721-23293457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               59, 181
               

               Conread position:
               349-607
               

               Cow position:
               chr21:24796586-24796337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               349-607
               

               Cow position:
               chr21:25472942-25473199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 173
               

               Conread position:
               349-607
               

               Cow position:
               chr21:25475571-25475836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               151, 177
               

               Conread position:
               349-607
               

               Cow position:
               chr21:28768995-28768739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 104
               

               Conread position:
               349-607
               

               Cow position:
               chr21:29214715-29214458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               349-607
               

               Cow position:
               chr21:32359121-32358868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 27
               

               Conread position:
               349-607
               

               Cow position:
               chr21:32560196-32559941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 34
               

               Conread position:
               349-607
               

               Cow position:
               chr21:34658478-34658733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               349-607
               

               Cow position:
               chr21:35437905-35437651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               349-607
               

               Cow position:
               chr21:37298911-37299161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 27
               

               Conread position:
               349-607
               

               Cow position:
               chr21:37517925-37517668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 105
               

               Conread position:
               349-607
               

               Cow position:
               chr21:38450242-38449985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               349-607
               

               Cow position:
               chr21:38900215-38900478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               58, 183
               

               Conread position:
               349-607
               

               Cow position:
               chr21:42917563-42917820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               154, 174
               

               Conread position:
               349-607
               

               Cow position:
               chr21:44657761-44658015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 69
               

               Conread position:
               349-607
               

               Cow position:
               chr21:47532471-47532739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               349-609
               

               Cow position:
               chr21:15304781-15304527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               349-609
               

               Cow position:
               chr21:15584957-15584704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               349-609
               

               Cow position:
               chr21:28210629-28210884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               349-609
               

               Cow position:
               chr21:31252768-31253026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 163
               

               Conread position:
               349-610
               

               Cow position:
               chr21:16278167-16278409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               110, 89
               

               Conread position:
               349-610
               

               Cow position:
               chr21:21216697-21216441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 74
               

               Conread position:
               349-610
               

               Cow position:
               chr21:31512502-31512241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 175
               

               Conread position:
               349-610
               

               Cow position:
               chr21:44804812-44804566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               151, 33
               

               Conread position:
               349-611
               

               Cow position:
               chr21:17084805-17085067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 100
               

               Conread position:
               349-612
               

               Cow position:
               chr21:27287744-27288007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 175
               

               Conread position:
               349-614
               

               Cow position:
               chr21:29069875-29069624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               349-614
               

               Cow position:
               chr21:36711634-36711903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 67
               

               Conread position:
               349-615
               

               Cow position:
               chr21:23801672-23801409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               115, 182
               

               Conread position:
               349-617
               

               Cow position:
               chr21:8071329-8071069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               349-618
               

               Cow position:
               chr21:37122630-37122363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               149, 162
               

               Conread position:
               349-620
               

               Cow position:
               chr21:4279077-4279344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 62
               

               Conread position:
               349-622
               

               Cow position:
               chr21:2768066-2767791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 176
               

               Conread position:
               349-622
               

               Cow position:
               chr21:4282423-4282151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 113
               

               Conread position:
               349-622
               

               Cow position:
               chr21:10045671-10045949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               124, 187
               

               Conread position:
               349-622
               

               Cow position:
               chr21:28259430-28259710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               349-639
               

               Cow position:
               chr21:18979415-18979126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 174
               

               Conread position:
               349-642
               

               Cow position:
               chr21:48484997-48484708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               154, 123
               

               Conread position:
               349-645
               

               Cow position:
               chr21:24130537-24130819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               349-647
               

               Cow position:
               chr21:27146765-27146470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 173
               

               Conread position:
               349-647
               

               Cow position:
               chr21:28477065-28477360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 174
               

               Conread position:
               349-650
               

               Cow position:
               chr21:6365641-6365940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               157, 64
               

               Conread position:
               349-651
               

               Cow position:
               chr21:17207933-17208234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               349-652
               

               Cow position:
               chr21:1765767-1765460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 175
               

               Conread position:
               349-652
               

               Cow position:
               chr21:4098330-4098621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               349-652
               

               Cow position:
               chr21:44254292-44254605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               146, 274
               

               Conread position:
               349-654
               

               Cow position:
               chr21:19051045-19050745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               153, 137
               

               Conread position:
               349-654
               

               Cow position:
               chr21:21027225-21027539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               86, 175
               

               Conread position:
               349-654
               

               Cow position:
               chr21:33420276-33419974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 74
               

               Conread position:
               349-654
               

               Cow position:
               chr21:44761914-44761614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               350-485
               

               Cow position:
               chr21:13762084-13762219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               350-526
               

               Cow position:
               chr21:24674194-24674369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 156
               

               Conread position:
               350-534
               

               Cow position:
               chr21:12961699-12961515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               350-537
               

               Cow position:
               chr21:39360532-39360351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               152, 42
               

               Conread position:
               350-541
               

               Cow position:
               chr21:16270243-16270056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               350-541
               

               Cow position:
               chr21:22315640-22315831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               139, 170
               

               Conread position:
               350-543
               

               Cow position:
               chr21:21966292-21966488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               350-589
               

               Cow position:
               chr21:42390756-42390523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               350-594
               

               Cow position:
               chr21:34254838-34254595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               350-595
               

               Cow position:
               chr21:16167398-16167158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               152, 73
               

               Conread position:
               350-601
               

               Cow position:
               chr21:21966927-21967175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               350-601
               

               Cow position:
               chr21:45842232-45841982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               149, 173
               

               Conread position:
               350-605
               

               Cow position:
               chr21:168201-167950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               350-605
               

               Cow position:
               chr21:13762999-13763246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               350-605
               

               Cow position:
               chr21:33832206-33831949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 131
               

               Conread position:
               350-605
               

               Cow position:
               chr21:39508199-39507942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 128
               

               Conread position:
               350-605
               

               Cow position:
               chr21:42558545-42558799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               111, 105
               

               Conread position:
               350-606
               

               Cow position:
               chr21:45263573-45263325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               150, 82
               

               Conread position:
               350-608
               

               Cow position:
               chr21:17482207-17482457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               350-609
               

               Cow position:
               chr21:2905022-2904763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               350-614
               

               Cow position:
               chr21:10000841-10000585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               153, 96
               

               Conread position:
               350-616
               

               Cow position:
               chr21:36956402-36956665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 74
               

               Conread position:
               350-622
               

               Cow position:
               chr21:13302966-13303242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               154, 178
               

               Conread position:
               350-628
               

               Cow position:
               chr21:30250762-30250489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 22
               

               Conread position:
               351-540
               

               Cow position:
               chr21:39693786-39693982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 179
               

               Conread position:
               351-555
               

               Cow position:
               chr21:29665233-29665025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               351-564
               

               Cow position:
               chr21:13716490-13716281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               351-588
               

               Cow position:
               chr21:33257328-33257566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               351-589
               

               Cow position:
               chr21:1582511-1582274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               351-589
               

               Cow position:
               chr21:13163377-13163601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               351-589
               

               Cow position:
               chr21:28839743-28839973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               149, 171
               

               Conread position:
               351-589
               

               Cow position:
               chr21:37352969-37352732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               351-596
               

               Cow position:
               chr21:44640648-44640890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               351-598
               

               Cow position:
               chr21:39401036-39401282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               351-601
               

               Cow position:
               chr21:36163517-36163271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               61, 175
               

               Conread position:
               351-601
               

               Cow position:
               chr21:44861820-44861570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               153, 179
               

               Conread position:
               351-602
               

               Cow position:
               chr21:26835851-26835602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               351-603
               

               Cow position:
               chr21:20107306-20107056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               351-605
               

               Cow position:
               chr21:81516-81765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               351-605
               

               Cow position:
               chr21:11509711-11509961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               149, 72
               

               Conread position:
               351-605
               

               Cow position:
               chr21:19957674-19957925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               351-605
               

               Cow position:
               chr21:43266721-43266468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               351-605
               

               Cow position:
               chr21:47767937-47767688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               152, 164
               

               Conread position:
               351-607
               

               Cow position:
               chr21:2261240-2260984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 172
               

               Conread position:
               351-607
               

               Cow position:
               chr21:3073300-3073048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               351-607
               

               Cow position:
               chr21:6623592-6623845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 62
               

               Conread position:
               351-607
               

               Cow position:
               chr21:9711276-9711018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               351-607
               

               Cow position:
               chr21:12365824-12366084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               24, 177
               

               Conread position:
               351-607
               

               Cow position:
               chr21:21908139-21907882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 174
               

               Conread position:
               351-607
               

               Cow position:
               chr21:32298064-32297805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 175
               

               Conread position:
               351-607
               

               Cow position:
               chr21:44826425-44826168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 181
               

               Conread position:
               351-609
               

               Cow position:
               chr21:10878365-10878640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               351-610
               

               Cow position:
               chr21:9863171-9862921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               351-622
               

               Cow position:
               chr21:4277160-4276893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               151, 171
               

               Conread position:
               351-653
               

               Cow position:
               chr21:22093080-22093389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               351-654
               

               Cow position:
               chr21:26557609-26557316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               61, 176
               

               Conread position:
               352-498
               

               Cow position:
               chr21:25157058-25157201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               352-524
               

               Cow position:
               chr21:743939-743764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-580
               

               Cow position:
               chr21:16230550-16230775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               352-587
               

               Cow position:
               chr21:48646342-48646114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               148, 49
               

               Conread position:
               352-588
               

               Cow position:
               chr21:6765246-6765024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               151, 77
               

               Conread position:
               352-589
               

               Cow position:
               chr21:5634461-5634695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               352-602
               

               Cow position:
               chr21:18950200-18950449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 172
               

               Conread position:
               352-605
               

               Cow position:
               chr21:4559300-4559050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 171
               

               Conread position:
               352-605
               

               Cow position:
               chr21:12982882-12982631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               352-622
               

               Cow position:
               chr21:48459425-48459155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 54
               

               Conread position:
               353-494
               

               Cow position:
               chr21:39700661-39700519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               353-605
               

               Cow position:
               chr21:29423832-29424083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               150, 170
               

               Conread position:
               353-606
               

               Cow position:
               chr21:13897635-13897889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               142, 51
               

               Conread position:
               353-606
               

               Cow position:
               chr21:35742709-35742449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               147, 193
               

               Conread position:
               353-607
               

               Cow position:
               chr21:27623350-27623603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 200
               

               Conread position:
               353-622
               

               Cow position:
               chr21:48530945-48531223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 179
               

               Conread position:
               354-602
               

               Cow position:
               chr21:17415073-17414829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               149, 66
               

               Conread position:
               355-605
               

               Cow position:
               chr21:45491-45740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 168
               

               Conread position:
               355-605
               

               Cow position:
               chr21:5857690-5857441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               107, 100
               

               Conread position:
               355-605
               

               Cow position:
               chr21:11312483-11312732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               355-626
               

               Cow position:
               chr21:6965538-6965268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               147, 168
               

               Conread position:
               356-527
               

               Cow position:
               chr21:1990758-1990930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               356-594
               

               Cow position:
               chr21:18712257-18712495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               357-607
               

               Cow position:
               chr21:3047113-3047361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 117
               

               Conread position:
               366-523
               

               Cow position:
               chr21:220195-220352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 104
               

               Conread position:
               367-539
               

               Cow position:
               chr21:37297992-37297820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               367-565
               

               Cow position:
               chr21:25291460-25291657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 152
               

               Conread position:
               367-589
               

               Cow position:
               chr21:31661514-31661735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               135, 154
               

               Conread position:
               367-600
               

               Cow position:
               chr21:23489873-23489643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               367-603
               

               Cow position:
               chr21:34738053-34738292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               136, 23
               

               Conread position:
               367-605
               

               Cow position:
               chr21:10436628-10436864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               136, 156
               

               Conread position:
               367-605
               

               Cow position:
               chr21:13300601-13300847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 116
               

               Conread position:
               367-605
               

               Cow position:
               chr21:21909813-21910050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               136, 156
               

               Conread position:
               367-606
               

               Cow position:
               chr21:33579656-33579886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               136, 163
               

               Conread position:
               367-607
               

               Cow position:
               chr21:31769-32007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               95, 88
               

               Conread position:
               367-607
               

               Cow position:
               chr21:33350161-33350398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 155
               

               Conread position:
               367-608
               

               Cow position:
               chr21:22724539-22724294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 155
               

               Conread position:
               367-622
               

               Cow position:
               chr21:2472988-2472734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               136, 88
               

               Conread position:
               367-645
               

               Cow position:
               chr21:44281375-44281098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 156
               

               Conread position:
               367-654
               

               Cow position:
               chr21:13585661-13585374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 156
               

               Conread position:
               369-569
               

               Cow position:
               chr21:19957055-19957251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               369-652
               

               Cow position:
               chr21:12802323-12802041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 153
               

               Conread position:
               370-603
               

               Cow position:
               chr21:42540764-42540527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               371-605
               

               Cow position:
               chr21:46132533-46132300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               371-607
               

               Cow position:
               chr21:8126322-8126089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               371-607
               

               Cow position:
               chr21:27864058-27863822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               132, 152
               

               Conread position:
               372-509
               

               Cow position:
               chr21:30627296-30627157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               372-539
               

               Cow position:
               chr21:27124928-27124762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               130, 151
               

               Conread position:
               372-607
               

               Cow position:
               chr21:30151161-30150921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               372-614
               

               Cow position:
               chr21:30192743-30192502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               129, 150
               

               Conread position:
               373-558
               

               Cow position:
               chr21:10624393-10624209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 150
               

               Conread position:
               373-583
               

               Cow position:
               chr21:13358065-13358273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               130, 82
               

               Conread position:
               375-595
               

               Cow position:
               chr21:21000588-21000371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               129, 39
               

               Conread position:
               375-610
               

               Cow position:
               chr21:18828869-18828637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               125, 94
               

               Conread position:
               376-544
               

               Cow position:
               chr21:3253425-3253593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               126, 139
               

               Conread position:
               376-603
               

               Cow position:
               chr21:34835987-34835762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               377-604
               

               Cow position:
               chr21:46143190-46143417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               378-580
               

               Cow position:
               chr21:5418342-5418542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               378-605
               

               Cow position:
               chr21:20243821-20243593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 26
               

               Conread position:
               378-610
               

               Cow position:
               chr21:33983338-33983110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               382-605
               

               Cow position:
               chr21:34900478-34900700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               121, 141
               

               Conread position:
               382-605
               

               Cow position:
               chr21:44073935-44074147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               382-610
               

               Cow position:
               chr21:34684826-34685054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               122, 110
               

               Conread position:
               383-509
               

               Cow position:
               chr21:46777853-46777726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               385-607
               

               Cow position:
               chr21:28599250-28599470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               119, 38
               

               Conread position:
               389-538
               

               Cow position:
               chr21:26243567-26243712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               389-540
               

               Cow position:
               chr21:28428942-28429091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               389-595
               

               Cow position:
               chr21:44219709-44219914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               114, 133
               

               Conread position:
               389-603
               

               Cow position:
               chr21:18784275-18784064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               126, 116
               

               Conread position:
               389-605
               

               Cow position:
               chr21:22100390-22100175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               114, 134
               

               Conread position:
               389-605
               

               Cow position:
               chr21:31948372-31948587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               114, 134
               

               Conread position:
               389-605
               

               Cow position:
               chr21:34899873-34899659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               114, 62
               

               Conread position:
               389-606
               

               Cow position:
               chr21:38917716-38917931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               114, 63
               

               Conread position:
               389-607
               

               Cow position:
               chr21:27230310-27230095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               114, 79
               

               Conread position:
               389-607
               

               Cow position:
               chr21:28625589-28625804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               113, 134
               

               Conread position:
               390-590
               

               Cow position:
               chr21:24086099-24085900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               390-601
               

               Cow position:
               chr21:1590742-1590953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               107, 113
               

               Conread position:
               390-610
               

               Cow position:
               chr21:28026607-28026826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               390-610
               

               Cow position:
               chr21:28442217-28442434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               113, 125
               

               Conread position:
               393-609
               

               Cow position:
               chr21:33415307-33415092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               393-616
               

               Cow position:
               chr21:27613749-27613974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               396-538
               

               Cow position:
               chr21:34560715-34560575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               398-607
               

               Cow position:
               chr21:19237207-19237415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 131
               

               Conread position:
               400-579
               

               Cow position:
               chr21:29785637-29785811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               402-618
               

               Cow position:
               chr21:23683031-23683250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               74, 131
               

               Conread position:
               404-607
               

               Cow position:
               chr21:34391471-34391269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               99, 119
               

               Conread position:
               405-605
               

               Cow position:
               chr21:2871219-2871021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               405-605
               

               Cow position:
               chr21:21600973-21601170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               406-540
               

               Cow position:
               chr21:4570072-4569939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 117
               

               Conread position:
               406-543
               

               Cow position:
               chr21:10516285-10516147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               406-544
               

               Cow position:
               chr21:15530520-15530657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 124
               

               Conread position:
               406-588
               

               Cow position:
               chr21:47823775-47823594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               96, 116
               

               Conread position:
               406-601
               

               Cow position:
               chr21:17411170-17410977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               406-605
               

               Cow position:
               chr21:43811-44012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               406-605
               

               Cow position:
               chr21:3920715-3920517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               97, 124
               

               Conread position:
               406-605
               

               Cow position:
               chr21:6063580-6063778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 117
               

               Conread position:
               406-605
               

               Cow position:
               chr21:14293871-14293673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               406-605
               

               Cow position:
               chr21:29954717-29954915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 117
               

               Conread position:
               406-606
               

               Cow position:
               chr21:43240362-43240559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               406-618
               

               Cow position:
               chr21:19766345-19766560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 210
               

               Conread position:
               406-639
               

               Cow position:
               chr21:1780851-1781082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 118
               

               Conread position:
               407-605
               

               Cow position:
               chr21:11353321-11353517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               408-605
               

               Cow position:
               chr21:20370194-20370390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 115
               

               Conread position:
               408-606
               

               Cow position:
               chr21:22464288-22464485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               94, 114
               

               Conread position:
               408-607
               

               Cow position:
               chr21:35573379-35573189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               410-603
               

               Cow position:
               chr21:44671256-44671446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               410-605
               

               Cow position:
               chr21:33901257-33901451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 113
               

               Conread position:
               411-535
               

               Cow position:
               chr21:16768105-16767978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               411-589
               

               Cow position:
               chr21:34141921-34141745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               411-602
               

               Cow position:
               chr21:23603653-23603836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               411-639
               

               Cow position:
               chr21:23283332-23283104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               412-589
               

               Cow position:
               chr21:32929718-32929544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               412-639
               

               Cow position:
               chr21:25764138-25764363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               413-605
               

               Cow position:
               chr21:17174646-17174842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               413-605
               

               Cow position:
               chr21:34909697-34909886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               413-605
               

               Cow position:
               chr21:38848966-38848775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               414-589
               

               Cow position:
               chr21:13388640-13388816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               415-589
               

               Cow position:
               chr21:15742596-15742424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               416-570
               

               Cow position:
               chr21:19882408-19882255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 106
               

               Conread position:
               416-578
               

               Cow position:
               chr21:41731572-41731411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 106
               

               Conread position:
               417-589
               

               Cow position:
               chr21:5630170-5630001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               417-607
               

               Cow position:
               chr21:10777449-10777261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               174, 96
               

               Conread position:
               417-607
               

               Cow position:
               chr21:36909325-36909518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               418-645
               

               Cow position:
               chr21:29839675-29839901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               419-589
               

               Cow position:
               chr21:37342344-37342177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               420-587
               

               Cow position:
               chr21:9438288-9438459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 101
               

               Conread position:
               420-589
               

               Cow position:
               chr21:28057104-28057271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               420-589
               

               Cow position:
               chr21:28730435-28730601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               420-605
               

               Cow position:
               chr21:4473507-4473323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               83, 103
               

               Conread position:
               420-607
               

               Cow position:
               chr21:36756119-36756305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               83, 103
               

               Conread position:
               422-595
               

               Cow position:
               chr21:33620273-33620447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               423-607
               

               Cow position:
               chr21:20925989-20925808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               423-607
               

               Cow position:
               chr21:39404053-39403871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               77, 26
               

               Conread position:
               423-608
               

               Cow position:
               chr21:14727570-14727754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               424-605
               

               Cow position:
               chr21:8896675-8896484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               425-606
               

               Cow position:
               chr21:13395070-13395252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               425-607
               

               Cow position:
               chr21:912445-912264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               426-580
               

               Cow position:
               chr21:2537332-2537179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 97
               

               Conread position:
               426-605
               

               Cow position:
               chr21:10292426-10292248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               428-620
               

               Cow position:
               chr21:27743260-27743451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 94
               

               Conread position:
               429-580
               

               Cow position:
               chr21:22140821-22140672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               433-612
               

               Cow position:
               chr21:684012-684190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               434-604
               

               Cow position:
               chr21:612241-612073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               438-606
               

               Cow position:
               chr21:21480650-21480483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               438-614
               

               Cow position:
               chr21:40265174-40265346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 35
               

               Conread position:
               439-622
               

               Cow position:
               chr21:20549392-20549205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               442-607
               

               Cow position:
               chr21:9218467-9218631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               443-607
               

               Cow position:
               chr21:29015628-29015462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               444-607
               

               Cow position:
               chr21:10514347-10514509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               444-609
               

               Cow position:
               chr21:3381725-3381559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               445-605
               

               Cow position:
               chr21:47465828-47465669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               445-641
               

               Cow position:
               chr21:29955712-29955517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               60, 84
               

               Conread position:
               448-607
               

               Cow position:
               chr21:38691732-38691890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               455-606
               

               Cow position:
               chr21:6051023-6051179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               456-607
               

               Cow position:
               chr21:297270-297420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               468-604
               

               Cow position:
               chr21:425969-426106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               473-596
               

               Cow position:
               chr21:30849373-30849252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               474-606
               

               Cow position:
               chr21:42914177-42914048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               475-589
               

               Cow position:
               chr21:5566544-5566659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               475-615
               

               Cow position:
               chr21:393588-393726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 54
               
Show alignments to all cow chromosomes.
Conread position:	297-613
Cow position:	chr21:43598813-43599119 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	209
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	5, 13
Conread position:	329-607
Cow position:	chr21:33209627-33209896 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	128, 19
Conread position:	330-606
Cow position:	chr21:26829812-26829539 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	198
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	173, 12
Conread position:	333-605
Cow position:	chr21:18935197-18935467 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	193
Alignm E-value:	8.00001e-41
Alignm gaps (pig, cow):	172, 148
Conread position:	335-607
Cow position:	chr21:17695042-17694770 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	167, 186
Conread position:	335-628
Cow position:	chr21:18846391-18846104 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	215
Alignm E-value:	0
Alignm gaps (pig, cow):	165, 51
Conread position:	338-602
Cow position:	chr21:20588460-20588723 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	194
Alignm E-value:	0
Alignm gaps (pig, cow):	165, 185
Conread position:	339-607
Cow position:	chr21:24111194-24110931 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	194
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	23, 36
Conread position:	345-603
Cow position:	chr21:17713752-17714006 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	184
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	159, 56
Conread position:	346-526
Cow position:	chr21:40267670-40267490 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	140
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	158, 92
Conread position:	347-526
Cow position:	chr21:48108406-48108228 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	136
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	155, 59
Conread position:	348-491
Cow position:	chr21:26697662-26697806 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	107
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	71, 0
Conread position:	348-565
Cow position:	chr21:24887410-24887633 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	167
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	57, 75
Conread position:	348-575
Cow position:	chr21:37942246-37942024 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	159
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	154, 135
Conread position:	348-595
Cow position:	chr21:7156146-7156389 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	183
Alignm E-value:	3.00004e-41
Alignm gaps (pig, cow):	156, 15
Conread position:	348-598
Cow position:	chr21:4567711-4567973 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	200
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	152, 107
Conread position:	348-607
Cow position:	chr21:29855113-29855371 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	196
Alignm E-value:	0
Alignm gaps (pig, cow):	155, 181
Conread position:	349-452
Cow position:	chr21:2419963-2420066 (view UCSC Genome Browser custom track)
Alignm length:	104
Alignm identity:	84
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	349-477
Cow position:	chr21:4035522-4035396 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	98
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	106, 0
Conread position:	349-484
Cow position:	chr21:17415727-17415593 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	103
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	132, 0