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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-47B13.5
        

               
Conread position:
               
298-564
               

               
Cow position:
               
chr27:13976771-13977027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
310-501
               

               
Cow position:
               
chr27:25278893-25278704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
329-558
               

               
Cow position:
               
chr27:22499321-22499093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
337-595
               

               
Cow position:
               
chr27:19482676-19482419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
338-606
               

               
Cow position:
               
chr27:4834999-4835253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
162, 49
               

               
Conread position:
               
343-606
               

               
Cow position:
               
chr27:27930845-27931110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
344-606
               

               
Cow position:
               
chr27:29816489-29816235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
348-487
               

               
Cow position:
               
chr27:2402616-2402478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
348-577
               

               
Cow position:
               
chr27:26644665-26644436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 176
               

               
Conread position:
               
348-589
               

               
Cow position:
               
chr27:8291439-8291672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
155, 44
               

               
Conread position:
               
348-594
               

               
Cow position:
               
chr27:18954632-18954869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
348-605
               

               
Cow position:
               
chr27:15178794-15178538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 175
               

               
Conread position:
               
348-605
               

               
Cow position:
               
chr27:21349167-21349423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 175
               

               
Conread position:
               
348-607
               

               
Cow position:
               
chr27:26785402-26785659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
348-609
               

               
Cow position:
               
chr27:3554944-3554685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
348-610
               

               
Cow position:
               
chr27:22179211-22179467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
349-446
               

               
Cow position:
               
chr27:25808918-25809016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
349-462
               

               
Cow position:
               
chr27:791455-791342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-472
               

               
Cow position:
               
chr27:16076118-16075996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
349-487
               

               
Cow position:
               
chr27:30176922-30176784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-493
               

               
Cow position:
               
chr27:26090180-26090322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
349-499
               

               
Cow position:
               
chr27:4920055-4920204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr27:13273143-13273305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-513
               

               
Cow position:
               
chr27:13644846-13645011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
349-525
               

               
Cow position:
               
chr27:26330523-26330695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr27:3235321-3235501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr27:20135426-20135604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr27:25112757-25112934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr27:21609257-21609446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 179
               

               
Conread position:
               
349-538
               

               
Cow position:
               
chr27:3340335-3340148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
153, 160
               

               
Conread position:
               
349-539
               

               
Cow position:
               
chr27:5268937-5269117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr27:5914528-5914714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr27:25885390-25885579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
153, 109
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr27:1141287-1141482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr27:18693198-18693398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr27:19931966-19931773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr27:9333258-9333462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-555
               

               
Cow position:
               
chr27:707533-707328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
349-563
               

               
Cow position:
               
chr27:24260242-24260033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
349-564
               

               
Cow position:
               
chr27:16576939-16576724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr27:30418240-30418025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 167
               

               
Conread position:
               
349-571
               

               
Cow position:
               
chr27:30641220-30641001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
218, 63
               

               
Conread position:
               
349-573
               

               
Cow position:
               
chr27:17462552-17462774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr27:165329-165106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr27:11651687-11651912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr27:525732-525511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr27:7818878-7818649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr27:17049859-17049625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
349-582
               

               
Cow position:
               
chr27:30476658-30476417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
349-584
               

               
Cow position:
               
chr27:18740971-18741204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr27:27291984-27292220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 181
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:1032902-1032672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:9254553-9254317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:12277697-12277935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:19388599-19388367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
157, 78
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:22559655-22559418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:23074531-23074295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 83
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:27019530-27019762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr27:30446806-30446567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:13695927-13696167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:20865951-20866183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:27049347-27049577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:1636372-1636614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:1654690-1654935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:3256605-3256363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:8429842-8430085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:12006090-12005845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:16494291-16494052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:16551039-16550797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 44
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:22013814-22014061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:26033932-26033691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr27:777293-777048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr27:27683454-27683697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-597
               

               
Cow position:
               
chr27:20757486-20757731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
156, 104
               

               
Conread position:
               
349-598
               

               
Cow position:
               
chr27:1058099-1058344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr27:12112136-12112380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr27:1521265-1521521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr27:9262687-9262437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr27:16428248-16428498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr27:17923500-17923750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr27:22330082-22330325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
221, 77
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr27:7958259-7958508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr27:26436123-26436376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 175
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr27:3989189-3988936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr27:16823382-16823135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr27:25784173-25783911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr27:25800620-25800367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr27:28984357-28984614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
155, 194
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr27:1030963-1030709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr27:9989290-9989033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr27:23658155-23658409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr27:28081723-28081991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr27:29446514-29446260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:523611-523867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:526502-526755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:724135-724390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:1354175-1353920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 19
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:1481484-1481739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:2001435-2001690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:2332091-2332346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:2557403-2557137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:3231947-3231694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:3650072-3650328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:4331148-4330906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 121
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:4768911-4769161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:4882188-4881933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:5861785-5861530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:5990464-5990206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 177
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:8201527-8201782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:8202409-8202156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:8743512-8743257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:8959426-8959171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:10590095-10590350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:11403489-11403233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:11481522-11481776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:11606295-11606040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:12006739-12006994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:12098172-12097920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:12147483-12147738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:12190865-12191124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:13317385-13317640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:13353896-13354152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:13422573-13422318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:13442261-13442513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:13843991-13843736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:15033301-15033046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:15100230-15100485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:15349226-15349477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:16030806-16030552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:16260397-16260641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:17403476-17403221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:19423785-19423529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:19523119-19522863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:19607068-19607323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:20811007-20811262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:22797068-22796813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:23079677-23079932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:23893925-23894180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:24055274-24055543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 257
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:26545346-26545599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:26598459-26598200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:29035791-29035536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:29374315-29374060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:29492984-29493235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
156, 56
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:29796827-29797082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr27:29811892-29812147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:344339-344086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:4824392-4824642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:4829099-4829343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
151, 25
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:16787415-16787156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:21452036-21452302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr27:27728902-27728646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
154, 64
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:537037-536776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 181
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:815945-815688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
154, 181
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:1293838-1294095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:4389628-4389887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:4719321-4719573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:5836412-5836677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:6620774-6620519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 100
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:8262430-8262686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:8942115-8942369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:9372085-9371823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:10579534-10579791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:11470123-11470378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:12751121-12751378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:13198479-13198228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:15272483-15272229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:15867956-15867710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
154, 56
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:15871741-15871485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:20549112-20549361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:20828123-20828384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:21407971-21408228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 132
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:24999157-24999413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:27527627-27527884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:28008487-28008754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 132
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr27:30921731-30921474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr27:17396875-17397132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr27:1123593-1123343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr27:5928041-5928304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr27:15312778-15312520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr27:24295669-24295410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr27:15363863-15364126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
349-617
               

               
Cow position:
               
chr27:12282275-12282532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:1502084-1502357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:12549689-12549416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:13409589-13409858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:20001225-20000952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:22400359-22400087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 175
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:27063876-27064137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
154, 87
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr27:28907644-28907373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 106
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr27:14381025-14381316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 176
               

               
Conread position:
               
349-645
               

               
Cow position:
               
chr27:16984374-16984074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
349-645
               

               
Cow position:
               
chr27:25971086-25970795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
236, 169
               

               
Conread position:
               
349-654
               

               
Cow position:
               
chr27:24558870-24559173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr27:11355390-11355560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr27:17476631-17476442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
112, 105
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr27:28924471-28924658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
350-565
               

               
Cow position:
               
chr27:27742801-27743014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
350-579
               

               
Cow position:
               
chr27:25791667-25791441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:2936414-2936665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:3729730-3729969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr27:3653108-3652854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr27:11095217-11094963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr27:19487392-19487138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
350-606
               

               
Cow position:
               
chr27:26087801-26087546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 173
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr27:10306695-10306953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr27:16263888-16263638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr27:14669794-14670061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 179
               

               
Conread position:
               
350-620
               

               
Cow position:
               
chr27:11434754-11435021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 98
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr27:10324339-10324070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr27:28276828-28276576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
351-523
               

               
Cow position:
               
chr27:25292747-25292572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr27:4509161-4508924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 172
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr27:18559340-18559110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr27:27867102-27867339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr27:8973041-8973291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr27:12239738-12239991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr27:16045323-16045576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr27:19299973-19299720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr27:20799005-20799257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr27:13182697-13182453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr27:26849111-26848861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
101, 112
               

               
Conread position:
               
351-609
               

               
Cow position:
               
chr27:26856633-26856890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr27:10384023-10384295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
117, 165
               

               
Conread position:
               
351-654
               

               
Cow position:
               
chr27:13901716-13902016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
352-585
               

               
Cow position:
               
chr27:5925870-5926103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
149, 209
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr27:4665054-4664817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr27:21283658-21283423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr27:30783512-30783745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
352-595
               

               
Cow position:
               
chr27:19963058-19962816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
30, 171
               

               
Conread position:
               
352-596
               

               
Cow position:
               
chr27:25985153-25985397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 165
               

               
Conread position:
               
352-606
               

               
Cow position:
               
chr27:4819007-4819243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
352-608
               

               
Cow position:
               
chr27:29183989-29184243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
352-610
               

               
Cow position:
               
chr27:16337609-16337358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
352-614
               

               
Cow position:
               
chr27:26142371-26142110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
148, 167
               

               
Conread position:
               
353-537
               

               
Cow position:
               
chr27:1884798-1884611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
353-558
               

               
Cow position:
               
chr27:8297080-8296881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr27:27192566-27192333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr27:30677494-30677260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
149, 99
               

               
Conread position:
               
353-601
               

               
Cow position:
               
chr27:26945464-26945219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
353-602
               

               
Cow position:
               
chr27:5853341-5853590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
246, 169
               

               
Conread position:
               
353-606
               

               
Cow position:
               
chr27:11256093-11255837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
355-609
               

               
Cow position:
               
chr27:21350443-21350694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
356-589
               

               
Cow position:
               
chr27:6292960-6292715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
141, 179
               

               
Conread position:
               
357-595
               

               
Cow position:
               
chr27:10670635-10670865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
366-544
               

               
Cow position:
               
chr27:26300767-26300590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
366-617
               

               
Cow position:
               
chr27:8569163-8569417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
64, 160
               

               
Conread position:
               
367-527
               

               
Cow position:
               
chr27:11413291-11413130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr27:1088797-1088590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr27:10321667-10321895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 155
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr27:23454582-23454827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr27:24202951-24202706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr27:31250287-31250531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
367-608
               

               
Cow position:
               
chr27:15316050-15315812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-610
               

               
Cow position:
               
chr27:26934816-26935051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr27:19646864-19647027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 93
               

               
Conread position:
               
368-605
               

               
Cow position:
               
chr27:3239453-3239687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
369-590
               

               
Cow position:
               
chr27:16794511-16794731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 154
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr27:26379889-26379697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 153
               

               
Conread position:
               
370-607
               

               
Cow position:
               
chr27:15375589-15375819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
372-550
               

               
Cow position:
               
chr27:31371252-31371434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
373-579
               

               
Cow position:
               
chr27:30561481-30561278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
373-605
               

               
Cow position:
               
chr27:19146297-19146530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
131, 175
               

               
Conread position:
               
373-622
               

               
Cow position:
               
chr27:1189258-1189506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
373-622
               

               
Cow position:
               
chr27:10085310-10085558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 167
               

               
Conread position:
               
374-595
               

               
Cow position:
               
chr27:30572672-30572891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
375-607
               

               
Cow position:
               
chr27:2682371-2682588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
377-639
               

               
Cow position:
               
chr27:9090248-9090510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
379-605
               

               
Cow position:
               
chr27:15643907-15644132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
379-652
               

               
Cow position:
               
chr27:13876273-13876008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
380-505
               

               
Cow position:
               
chr27:4812225-4812351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
382-605
               

               
Cow position:
               
chr27:2627526-2627747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
386-603
               

               
Cow position:
               
chr27:4983068-4983274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
386-610
               

               
Cow position:
               
chr27:21392967-21393187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
388-565
               

               
Cow position:
               
chr27:23946449-23946625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr27:18621340-18621125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr27:21668602-21668816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
390-535
               

               
Cow position:
               
chr27:7023149-7023292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
390-544
               

               
Cow position:
               
chr27:8335322-8335169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
390-606
               

               
Cow position:
               
chr27:29085443-29085649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 133
               

               
Conread position:
               
391-526
               

               
Cow position:
               
chr27:9199161-9199026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
391-589
               

               
Cow position:
               
chr27:864853-864653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
396-513
               

               
Cow position:
               
chr27:1522389-1522502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
396-606
               

               
Cow position:
               
chr27:13638434-13638641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
107, 126
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr27:23128984-23128780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
397-607
               

               
Cow position:
               
chr27:2900710-2900918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 126
               

               
Conread position:
               
398-575
               

               
Cow position:
               
chr27:27447816-27447990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
399-595
               

               
Cow position:
               
chr27:27053857-27053662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 131
               

               
Conread position:
               
399-607
               

               
Cow position:
               
chr27:795349-795133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
399-607
               

               
Cow position:
               
chr27:23595788-23595593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
403-605
               

               
Cow position:
               
chr27:18812213-18812012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
403-605
               

               
Cow position:
               
chr27:31566058-31566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
403-616
               

               
Cow position:
               
chr27:6074440-6074230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
405-526
               

               
Cow position:
               
chr27:15407731-15407854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
406-520
               

               
Cow position:
               
chr27:17925595-17925708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
406-544
               

               
Cow position:
               
chr27:21405897-21406030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr27:32440-32638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr27:20858766-20858964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr27:29234928-29234730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
407-602
               

               
Cow position:
               
chr27:17332166-17331974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
408-605
               

               
Cow position:
               
chr27:834023-834219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
409-603
               

               
Cow position:
               
chr27:28018855-28018663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
410-605
               

               
Cow position:
               
chr27:30684428-30684233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
414-571
               

               
Cow position:
               
chr27:30583259-30583103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
416-572
               

               
Cow position:
               
chr27:21986398-21986244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
418-571
               

               
Cow position:
               
chr27:18943554-18943704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
418-589
               

               
Cow position:
               
chr27:14881386-14881217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
422-607
               

               
Cow position:
               
chr27:25809022-25809200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
425-606
               

               
Cow position:
               
chr27:10274955-10275138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
426-605
               

               
Cow position:
               
chr27:5881196-5881374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
427-605
               

               
Cow position:
               
chr27:12016842-12016665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
428-595
               

               
Cow position:
               
chr27:28293678-28293512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
428-604
               

               
Cow position:
               
chr27:30877718-30877893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
429-589
               

               
Cow position:
               
chr27:19578613-19578454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
429-605
               

               
Cow position:
               
chr27:22418269-22418442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
437-601
               

               
Cow position:
               
chr27:21578075-21578237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
438-605
               

               
Cow position:
               
chr27:19325991-19325825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
438-610
               

               
Cow position:
               
chr27:15927265-15927092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 144
               

               
Conread position:
               
440-605
               

               
Cow position:
               
chr27:30271640-30271476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
440-607
               

               
Cow position:
               
chr27:23511608-23511442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
440-610
               

               
Cow position:
               
chr27:31230605-31230775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
443-605
               

               
Cow position:
               
chr27:5464344-5464184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
443-605
               

               
Cow position:
               
chr27:9046147-9045986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
446-605
               

               
Cow position:
               
chr27:27630258-27630416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
446-622
               

               
Cow position:
               
chr27:23502945-23502768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
448-607
               

               
Cow position:
               
chr27:25719207-25719367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
451-607
               

               
Cow position:
               
chr27:4673493-4673338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
455-607
               

               
Cow position:
               
chr27:15667997-15668148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
459-607
               

               
Cow position:
               
chr27:17473291-17473145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
461-602
               

               
Cow position:
               
chr27:23917552-23917690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
470-603
               

               
Cow position:
               
chr27:26796679-26796810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
470-617
               

               
Cow position:
               
chr27:26223802-26223948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
474-604
               

               
Cow position:
               
chr27:21418540-21418669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
481-610
               

               
Cow position:
               
chr27:1768186-1768314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
483-622
               

               
Cow position:
               
chr27:15319895-15319758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 47
               
Show alignments to all cow chromosomes.