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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-47B13.5
        

               
Conread position:
               
297-605
               

               
Cow position:
               
chr29:3584797-3584495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
313-607
               

               
Cow position:
               
chr29:10156940-10156657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
324-605
               

               
Cow position:
               
chr29:2837705-2837428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 24
               

               
Conread position:
               
327-575
               

               
Cow position:
               
chr29:29550099-29550344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
332-602
               

               
Cow position:
               
chr29:26980866-26981130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
333-469
               

               
Cow position:
               
chr29:20007936-20007801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
341-610
               

               
Cow position:
               
chr29:7956598-7956330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 182
               

               
Conread position:
               
344-652
               

               
Cow position:
               
chr29:8681577-8681275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
348-526
               

               
Cow position:
               
chr29:15918991-15919170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
348-558
               

               
Cow position:
               
chr29:2532471-2532668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
348-594
               

               
Cow position:
               
chr29:11526334-11526090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
348-599
               

               
Cow position:
               
chr29:19251639-19251889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
348-605
               

               
Cow position:
               
chr29:23753836-23753577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 167
               

               
Conread position:
               
348-622
               

               
Cow position:
               
chr29:9638931-9638664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 115
               

               
Conread position:
               
349-469
               

               
Cow position:
               
chr29:28621861-28621745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
349-469
               

               
Cow position:
               
chr29:32942253-32942374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
349-476
               

               
Cow position:
               
chr29:44020288-44020161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-477
               

               
Cow position:
               
chr29:19523113-19523241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-487
               

               
Cow position:
               
chr29:30432587-30432452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
349-491
               

               
Cow position:
               
chr29:12798192-12798334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-493
               

               
Cow position:
               
chr29:23984572-23984428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
349-498
               

               
Cow position:
               
chr29:21167875-21168024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr29:10159149-10158998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 141
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr29:15104935-15105087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr29:19946571-19946420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr29:38717025-38717177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr29:550246-550404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr29:3106895-3107049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr29:34737097-34736944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr29:5961884-5962046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr29:21474757-21474919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-520
               

               
Cow position:
               
chr29:26996520-26996699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
349-521
               

               
Cow position:
               
chr29:13876681-13876854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr29:8934664-8934840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr29:11003791-11003964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr29:35228277-35228453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
349-525
               

               
Cow position:
               
chr29:1332876-1332702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:2461764-2461942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:16209997-16209819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:18521655-18521485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:19398267-19398442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
155, 71
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:27823699-27823876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr29:28990344-28990509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
349-528
               

               
Cow position:
               
chr29:18399858-18400034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr29:5786102-5786289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
349-535
               

               
Cow position:
               
chr29:14207960-14207773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
349-537
               

               
Cow position:
               
chr29:16169705-16169516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
349-537
               

               
Cow position:
               
chr29:25087951-25088137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
349-537
               

               
Cow position:
               
chr29:34120907-34120723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr29:19657489-19657679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr29:21429256-21429066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-542
               

               
Cow position:
               
chr29:35037628-35037818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr29:6218209-6218012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr29:9939192-9939002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr29:32913510-32913316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr29:35280539-35280344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr29:41183573-41183379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
349-545
               

               
Cow position:
               
chr29:8070143-8070342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 176
               

               
Conread position:
               
349-556
               

               
Cow position:
               
chr29:6635211-6635407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr29:4367045-4367251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
349-561
               

               
Cow position:
               
chr29:19894584-19894790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
349-562
               

               
Cow position:
               
chr29:42255371-42255157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr29:2104405-2104620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr29:3487369-3487584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 166
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr29:33123175-33123395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr29:45650943-45650738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 69
               

               
Conread position:
               
349-571
               

               
Cow position:
               
chr29:36193299-36193079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 118
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr29:2950274-2950499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr29:32560409-32560184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr29:19596878-19596653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
349-579
               

               
Cow position:
               
chr29:27814384-27814612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr29:13129622-13129850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr29:27310078-27309851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 89
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr29:10643807-10643570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr29:13646170-13645934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
349-587
               

               
Cow position:
               
chr29:17300522-17300755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr29:961302-961536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr29:13058311-13058548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 141
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr29:25478750-25478987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:1956715-1956475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:11588635-11588872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:13639973-13639739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:13652662-13652899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:15943948-15944186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:32644286-32644523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 74
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:36242711-36242951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 82
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr29:38247378-38247137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr29:95204-94964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr29:17965415-17965658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 170
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr29:649645-649882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr29:4755644-4755408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr29:6150690-6150447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr29:17458546-17458301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr29:20075190-20075436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr29:24080306-24080544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr29:29569506-29569758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
349-597
               

               
Cow position:
               
chr29:629010-629258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
149, 74
               

               
Conread position:
               
349-597
               

               
Cow position:
               
chr29:5426246-5425999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-598
               

               
Cow position:
               
chr29:32962915-32963159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
349-600
               

               
Cow position:
               
chr29:2482948-2482698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr29:607040-606789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr29:8493608-8493364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 116
               

               
Conread position:
               
349-601
               

               
Cow position:
               
chr29:26263228-26263475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 175
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr29:16187066-16187315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-602
               

               
Cow position:
               
chr29:45462839-45463091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr29:16097931-16097685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr29:16347819-16348071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr29:23154594-23154854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
65, 145
               

               
Conread position:
               
349-603
               

               
Cow position:
               
chr29:38229611-38229861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr29:17794787-17795049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
349-604
               

               
Cow position:
               
chr29:40294915-40295169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:292095-292350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:406887-406634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 129
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:527229-526974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:528909-528660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:727337-727592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:735164-734908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:1479059-1479313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:1688350-1688597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 50
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:1743107-1743362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:2103449-2103704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:2400962-2401217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:2402294-2402549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:2520954-2521210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:2694308-2694564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:4610969-4611223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:5550378-5550631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:6413890-6414144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:6879327-6879069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 208
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:7427533-7427278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:7847999-7848253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:9641531-9641784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:10032045-10031790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:10145869-10145614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:10820107-10819852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:11119104-11118849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13018016-13017760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13101516-13101771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13128542-13128287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13585812-13586067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13590335-13590081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13623766-13623511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13634956-13634696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
151, 117
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:13923686-13923941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:14568904-14569159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15251457-15251712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15570142-15570397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15698849-15698594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15755559-15755304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15762275-15762540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 132
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15768018-15767763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15936887-15936632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:15965946-15965691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:16035788-16035535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:16042277-16042532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:16065317-16065572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:16185171-16184916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:17077621-17077868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:18011179-18011434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:19124498-19124746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:19514731-19514476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:19524532-19524278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:19619661-19619406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:19891170-19891425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:20014680-20014425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:21227583-21227838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:21231474-21231219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:22341120-22341375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:23980335-23980590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:24982963-24982708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:25927179-25926924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
158, 151
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:27702685-27702940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:28656765-28656511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:28696772-28696530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:29505777-29505527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:31093954-31093699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 172
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:31184984-31185238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:31765647-31765903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32292202-32292454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 135
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32298332-32298587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32317473-32317725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 55
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32329652-32329397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32353203-32353458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32378179-32378434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32516101-32516356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:32556136-32555884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:34780377-34780123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:35076738-35076993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:35736013-35735757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:36633456-36633204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 70
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:37451688-37451945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:38271611-38271870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
116, 178
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:38349754-38349498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:38672486-38672230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 175
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:39047708-39047963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:39075828-39075573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:39214242-39213987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:40157352-40157607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-605
               

               
Cow position:
               
chr29:40498272-40498017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:2624138-2623883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 132
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:7666655-7666399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 182
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:10652716-10652971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:13611281-13611027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 182
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:14619276-14619533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
249, 180
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:17117309-17117563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:19857065-19857321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:32732706-32732965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 177
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:35739125-35738873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr29:36530231-36530495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:686816-686559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:2744896-2744640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:3539882-3539622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:4120231-4120485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:4326870-4327127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:4480786-4480542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:4519349-4519599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:4875530-4875272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:5977720-5977472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:6871664-6871409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:6925393-6925650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:10154642-10154897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:10297126-10296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:13027811-13028067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
151, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:13107716-13107970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:16012368-16012110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 177
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:16195216-16195460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
97, 162
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:16609129-16609372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:17408712-17408965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:19755816-19756080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:20244666-20244920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:20429587-20429332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:22935659-22935919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:29056561-29056815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:29065801-29066059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:30391917-30391663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:31594691-31594437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:32175865-32176121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 173
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:35434245-35434502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr29:43517356-43517091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr29:13553516-13553773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
349-608
               

               
Cow position:
               
chr29:38409804-38410062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr29:6935091-6935350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr29:7860009-7860267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 175
               

               
Conread position:
               
349-609
               

               
Cow position:
               
chr29:12160137-12159885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr29:18084961-18085210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr29:9079196-9078932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr29:14116419-14116683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr29:36209304-36209567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
349-617
               

               
Cow position:
               
chr29:10452211-10451933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 184
               

               
Conread position:
               
349-618
               

               
Cow position:
               
chr29:8589129-8588861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
349-618
               

               
Cow position:
               
chr29:24659710-24659457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
349-619
               

               
Cow position:
               
chr29:9799946-9800215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
349-619
               

               
Cow position:
               
chr29:15289109-15289376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
349-619
               

               
Cow position:
               
chr29:32289996-32290247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr29:26161227-26160952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 179
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr29:24728693-24728420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr29:43327405-43327675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
349-622
               

               
Cow position:
               
chr29:45583428-45583159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
349-629
               

               
Cow position:
               
chr29:7724269-7724557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 182
               

               
Conread position:
               
349-634
               

               
Cow position:
               
chr29:29556526-29556252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr29:8623625-8623339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
349-645
               

               
Cow position:
               
chr29:2484523-2484228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
349-650
               

               
Cow position:
               
chr29:3169081-3168785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr29:2367434-2367128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr29:17132241-17131942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr29:21255570-21255853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
154, 87
               

               
Conread position:
               
349-654
               

               
Cow position:
               
chr29:30106252-30105944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
349-662
               

               
Cow position:
               
chr29:24578233-24578537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
350-510
               

               
Cow position:
               
chr29:34794250-34794088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
350-533
               

               
Cow position:
               
chr29:29477643-29477457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
350-543
               

               
Cow position:
               
chr29:26222696-26222887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr29:26128897-26128705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
153, 115
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr29:34298495-34298305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 70
               

               
Conread position:
               
350-573
               

               
Cow position:
               
chr29:10639065-10638847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
350-579
               

               
Cow position:
               
chr29:32216771-32216544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr29:44607798-44607559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
350-604
               

               
Cow position:
               
chr29:26331663-26331911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr29:26994632-26994895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr29:29565731-29565477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
350-606
               

               
Cow position:
               
chr29:27833355-27833618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr29:24346084-24345832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
350-608
               

               
Cow position:
               
chr29:2589532-2589279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr29:43729446-43729705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
350-618
               

               
Cow position:
               
chr29:27007503-27007763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 61
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr29:3501774-3502042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr29:26285653-26285380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
351-503
               

               
Cow position:
               
chr29:13849382-13849229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
351-526
               

               
Cow position:
               
chr29:17109366-17109541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr29:18072305-18072543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
149, 171
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr29:29303528-29303287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 175
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr29:33009157-33009399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
351-595
               

               
Cow position:
               
chr29:20999954-21000190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
351-597
               

               
Cow position:
               
chr29:21443967-21443724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 21
               

               
Conread position:
               
351-601
               

               
Cow position:
               
chr29:109055-109301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
351-604
               

               
Cow position:
               
chr29:37617532-37617784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr29:7811586-7811335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr29:20254773-20255026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
351-605
               

               
Cow position:
               
chr29:21199646-21199393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr29:5241005-5241260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 172
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr29:40116934-40117186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
351-607
               

               
Cow position:
               
chr29:40300590-40300335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 172
               

               
Conread position:
               
351-610
               

               
Cow position:
               
chr29:45208109-45208365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
351-618
               

               
Cow position:
               
chr29:18879289-18879025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 107
               

               
Conread position:
               
351-645
               

               
Cow position:
               
chr29:757025-756735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
351-659
               

               
Cow position:
               
chr29:24952043-24952368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
152, 43
               

               
Conread position:
               
352-492
               

               
Cow position:
               
chr29:6921137-6920996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr29:21528806-21528641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
151, 118
               

               
Conread position:
               
352-544
               

               
Cow position:
               
chr29:24420803-24420994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
151, 171
               

               
Conread position:
               
352-558
               

               
Cow position:
               
chr29:10802265-10802071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
352-565
               

               
Cow position:
               
chr29:27619216-27619421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
352-587
               

               
Cow position:
               
chr29:4490103-4490331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr29:42807592-42807827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr29:133567-133799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
352-596
               

               
Cow position:
               
chr29:11633960-11634195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
81, 86
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr29:5187402-5187156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 133
               

               
Conread position:
               
352-606
               

               
Cow position:
               
chr29:28506461-28506725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr29:41113468-41113213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 114
               

               
Conread position:
               
352-614
               

               
Cow position:
               
chr29:17153861-17154124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
352-622
               

               
Cow position:
               
chr29:7664384-7664113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
353-526
               

               
Cow position:
               
chr29:15830666-15830492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
353-538
               

               
Cow position:
               
chr29:20904929-20904745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
150, 169
               

               
Conread position:
               
353-601
               

               
Cow position:
               
chr29:11695913-11696160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 170
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr29:27008576-27008827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr29:4001797-4002050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 167
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr29:8667192-8667445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 170
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr29:23239893-23240144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr29:34746276-34746022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 171
               

               
Conread position:
               
354-591
               

               
Cow position:
               
chr29:8136874-8136637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
356-564
               

               
Cow position:
               
chr29:25423219-25423426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
147, 166
               

               
Conread position:
               
357-607
               

               
Cow position:
               
chr29:11365632-11365889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
148, 82
               

               
Conread position:
               
358-607
               

               
Cow position:
               
chr29:9332534-9332776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
360-605
               

               
Cow position:
               
chr29:33599719-33599475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
143, 163
               

               
Conread position:
               
367-526
               

               
Cow position:
               
chr29:30028781-30028939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
367-548
               

               
Cow position:
               
chr29:10849770-10849588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
367-605
               

               
Cow position:
               
chr29:20593357-20593594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-605
               

               
Cow position:
               
chr29:34865213-34865450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
367-607
               

               
Cow position:
               
chr29:5238111-5238350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 156
               

               
Conread position:
               
367-610
               

               
Cow position:
               
chr29:4201512-4201754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
132, 156
               

               
Conread position:
               
367-620
               

               
Cow position:
               
chr29:11433329-11433590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
368-622
               

               
Cow position:
               
chr29:10237034-10236779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
369-581
               

               
Cow position:
               
chr29:11786629-11786835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
369-588
               

               
Cow position:
               
chr29:1613178-1612964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 42
               

               
Conread position:
               
369-604
               

               
Cow position:
               
chr29:44379231-44378998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
370-595
               

               
Cow position:
               
chr29:39332183-39331962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
372-503
               

               
Cow position:
               
chr29:43320835-43320966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
372-512
               

               
Cow position:
               
chr29:32543769-32543910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
372-580
               

               
Cow position:
               
chr29:21535293-21535086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr29:17135175-17135388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
372-602
               

               
Cow position:
               
chr29:15902894-15902663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
373-605
               

               
Cow position:
               
chr29:27858215-27858443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
373-616
               

               
Cow position:
               
chr29:26778290-26778532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
373-624
               

               
Cow position:
               
chr29:11684402-11684652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
375-605
               

               
Cow position:
               
chr29:14050808-14050584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 93
               

               
Conread position:
               
376-607
               

               
Cow position:
               
chr29:2188947-2188716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
377-605
               

               
Cow position:
               
chr29:26334979-26334755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr29:40732848-40732653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
379-605
               

               
Cow position:
               
chr29:7866155-7865932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
380-607
               

               
Cow position:
               
chr29:19761681-19761907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
382-607
               

               
Cow position:
               
chr29:3574957-3574734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
382-639
               

               
Cow position:
               
chr29:24623667-24623906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
383-601
               

               
Cow position:
               
chr29:18022216-18022003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
386-619
               

               
Cow position:
               
chr29:16186026-16185790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
389-526
               

               
Cow position:
               
chr29:21286487-21286625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
389-578
               

               
Cow position:
               
chr29:22280234-22280422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
115, 134
               

               
Conread position:
               
389-589
               

               
Cow position:
               
chr29:13616238-13616041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
389-590
               

               
Cow position:
               
chr29:6261899-6261698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
115, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr29:3330230-3330445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-605
               

               
Cow position:
               
chr29:28578788-28579003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
389-606
               

               
Cow position:
               
chr29:2415389-2415176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
389-629
               

               
Cow position:
               
chr29:34754691-34754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
190, 132
               

               
Conread position:
               
389-630
               

               
Cow position:
               
chr29:45006201-45005961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
390-575
               

               
Cow position:
               
chr29:18025837-18026020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 100
               

               
Conread position:
               
390-589
               

               
Cow position:
               
chr29:21546104-21545909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
390-605
               

               
Cow position:
               
chr29:12898207-12898421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 133
               

               
Conread position:
               
391-605
               

               
Cow position:
               
chr29:5935609-5935822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
112, 132
               

               
Conread position:
               
391-607
               

               
Cow position:
               
chr29:28776038-28775816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 111
               

               
Conread position:
               
392-589
               

               
Cow position:
               
chr29:7799227-7799422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
392-605
               

               
Cow position:
               
chr29:9717070-9717282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
111, 131
               

               
Conread position:
               
392-607
               

               
Cow position:
               
chr29:7290334-7290540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
392-607
               

               
Cow position:
               
chr29:10819253-10819029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
393-553
               

               
Cow position:
               
chr29:2686437-2686597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
395-606
               

               
Cow position:
               
chr29:40096388-40096596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
396-502
               

               
Cow position:
               
chr29:18283190-18283084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
396-595
               

               
Cow position:
               
chr29:22339805-22339605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:2308702-2308928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 126
               

               
Conread position:
               
399-578
               

               
Cow position:
               
chr29:18720573-18720395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
399-622
               

               
Cow position:
               
chr29:8142937-8143156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
400-601
               

               
Cow position:
               
chr29:9911582-9911782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 123
               

               
Conread position:
               
400-603
               

               
Cow position:
               
chr29:18364982-18364780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 122
               

               
Conread position:
               
400-606
               

               
Cow position:
               
chr29:11136461-11136257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
402-589
               

               
Cow position:
               
chr29:42939908-42939725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
405-605
               

               
Cow position:
               
chr29:19338391-19338590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
98, 118
               

               
Conread position:
               
406-601
               

               
Cow position:
               
chr29:13127673-13127487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
406-601
               

               
Cow position:
               
chr29:35264703-35264509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:44061-43863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
98, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:6332985-6333177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:6334224-6334416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:6455310-6455508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:11703455-11703653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:16067017-16067215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:18300150-18300348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:27928232-27928034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr29:43692391-43692587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
406-606
               

               
Cow position:
               
chr29:34429797-34429996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
406-607
               

               
Cow position:
               
chr29:984295-984496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
406-607
               

               
Cow position:
               
chr29:19792831-19792635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
406-607
               

               
Cow position:
               
chr29:23348792-23348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
406-622
               

               
Cow position:
               
chr29:20213226-20213441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
406-652
               

               
Cow position:
               
chr29:19428099-19428348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 117
               

               
Conread position:
               
407-580
               

               
Cow position:
               
chr29:16051700-16051524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
407-589
               

               
Cow position:
               
chr29:11972715-11972895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
407-600
               

               
Cow position:
               
chr29:35112643-35112451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
409-609
               

               
Cow position:
               
chr29:45820805-45820613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
413-605
               

               
Cow position:
               
chr29:4620616-4620807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
413-607
               

               
Cow position:
               
chr29:13458436-13458626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
414-589
               

               
Cow position:
               
chr29:3822298-3822473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr29:37719350-37719544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
170, 55
               

               
Conread position:
               
415-605
               

               
Cow position:
               
chr29:15116854-15116664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
416-589
               

               
Cow position:
               
chr29:20933155-20933320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
416-590
               

               
Cow position:
               
chr29:41850361-41850187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
417-589
               

               
Cow position:
               
chr29:28281321-28281151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
418-575
               

               
Cow position:
               
chr29:10626852-10627008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
418-600
               

               
Cow position:
               
chr29:23988237-23988418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
419-622
               

               
Cow position:
               
chr29:20055089-20055292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
420-540
               

               
Cow position:
               
chr29:8415350-8415471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
420-601
               

               
Cow position:
               
chr29:18561350-18561171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
420-605
               

               
Cow position:
               
chr29:16382301-16382484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
420-607
               

               
Cow position:
               
chr29:457600-457414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
421-605
               

               
Cow position:
               
chr29:3973092-3972916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
423-605
               

               
Cow position:
               
chr29:10122655-10122475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
423-652
               

               
Cow position:
               
chr29:43500018-43499792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
424-669
               

               
Cow position:
               
chr29:4057956-4058205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
425-606
               

               
Cow position:
               
chr29:9137746-9137928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
426-604
               

               
Cow position:
               
chr29:2984308-2984486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
426-605
               

               
Cow position:
               
chr29:26987017-26987194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
429-615
               

               
Cow position:
               
chr29:799043-798860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
438-605
               

               
Cow position:
               
chr29:30708084-30707918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
438-609
               

               
Cow position:
               
chr29:36428819-36428651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
441-605
               

               
Cow position:
               
chr29:16785377-16785540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
443-587
               

               
Cow position:
               
chr29:17667963-17668105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
446-606
               

               
Cow position:
               
chr29:1324911-1325069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
446-607
               

               
Cow position:
               
chr29:29771013-29770854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
449-607
               

               
Cow position:
               
chr29:26130269-26130425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
450-581
               

               
Cow position:
               
chr29:26616464-26616334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
450-619
               

               
Cow position:
               
chr29:21933657-21933491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
455-607
               

               
Cow position:
               
chr29:18749101-18748949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
455-625
               

               
Cow position:
               
chr29:31943326-31943497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
461-607
               

               
Cow position:
               
chr29:21665462-21665607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
464-607
               

               
Cow position:
               
chr29:36586067-36586211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
466-605
               

               
Cow position:
               
chr29:478615-478753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 63
               
Show alignments to all cow chromosomes.