Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-158
Cow position: chr12:48471495-48471657 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 50

Conread position: 2-162
Cow position: chr12:27931522-27931683 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 37

Conread position: 2-162
Cow position: chr12:42858149-42858316 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 149

Conread position: 2-165
Cow position: chr12:35345924-35345767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 58

Conread position: 11-167
Cow position: chr12:21943118-21942957 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 138

Conread position: 19-162
Cow position: chr12:19870265-19870124 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 30

Conread position: 277-440
Cow position: chr12:29442662-29442499 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 140

Conread position: 279-491
Cow position: chr12:1776712-1776925 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 54

Conread position: 282-430
Cow position: chr12:20843868-20843720 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 15

Conread position: 282-434
Cow position: chr12:1888307-1888461 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 70

Conread position: 282-480
Cow position: chr12:35313146-35313340 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 71

Conread position: 282-488
Cow position: chr12:48471628-48471834 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 282-496
Cow position: chr12:32654799-32654582 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 70

Conread position: 282-497
Cow position: chr12:27931652-27931869 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position: chr12:37560261-37560043 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 282-497
Cow position: chr12:42858285-42858502 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr12:6405390-6405608 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr12:8676847-8677062 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr12:11099474-11099256 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr12:21253361-21253575 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 174

Conread position: 282-498
Cow position: chr12:25099821-25100039 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr12:27854712-27854930 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 53

Conread position: 282-505
Cow position: chr12:1870557-1870331 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 55

Conread position: 282-506
Cow position: chr12:35345801-35345581 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 52

Conread position: 282-523
Cow position: chr12:21942993-21942750 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 129

Conread position: 285-416
Cow position: chr12:42607017-42607149 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 285-450
Cow position: chr12:32064340-32064178 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 120

Conread position: 285-453
Cow position: chr12:31202240-31202409 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr12:3362189-3361975 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 285-494
Cow position: chr12:21386994-21387204 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position: chr12:43030133-43030345 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 101

Conread position: 285-498
Cow position: chr12:23140944-23141159 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 49

Conread position: 285-528
Cow position: chr12:25262217-25262456 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 41, 49

Conread position: 286-441
Cow position: chr12:28005152-28005001 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 55

Conread position: 286-493
Cow position: chr12:21225692-21225895 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 47

Conread position: 286-494
Cow position: chr12:20996835-20997045 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 25

Conread position: 286-498
Cow position: chr12:600118-600326 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 55

Conread position: 286-498
Cow position: chr12:1403740-1403528 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 49

Conread position: 287-495
Cow position: chr12:23161681-23161891 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 102

Conread position: 291-452
Cow position: chr12:22570581-22570742 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 143

Conread position: 294-431
Cow position: chr12:11581053-11580915 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 40

Conread position: 298-498
Cow position: chr12:5144923-5144721 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 92

Conread position: 304-494
Cow position: chr12:21429095-21428904 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 137

Conread position: 306-498
Cow position: chr12:33119385-33119186 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 45

Conread position: 312-497
Cow position: chr12:36368052-36367867 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 125

Conread position: 312-498
Cow position: chr12:36337998-36337812 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 125

Conread position: 312-498
Cow position: chr12:36428743-36428558 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 57

Conread position: 312-521
Cow position: chr12:36449787-36449583 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 125

Conread position: 336-452
Cow position: chr12:24556674-24556789 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.