Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-155
Cow position: chr14:28244633-28244790 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 50

Conread position: 2-155
Cow position: chr14:44774998-44775157 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 50

Conread position: 2-159
Cow position: chr14:35384783-35384941 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 38

Conread position: 2-162
Cow position: chr14:17759845-17760003 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 37

Conread position: 2-162
Cow position: chr14:45710686-45710847 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 46

Conread position: 3-144
Cow position: chr14:13579425-13579287 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 33

Conread position: 3-155
Cow position: chr14:43559277-43559117 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 11

Conread position: 4-163
Cow position: chr14:19327222-19327386 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 145

Conread position: 4-165
Cow position: chr14:13462562-13462389 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 50

Conread position: 265-494
Cow position: chr14:37412823-37413051 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 281-465
Cow position: chr14:13303867-13303683 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 53

Conread position: 281-480
Cow position: chr14:44227286-44227086 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 55

Conread position: 282-384
Cow position: chr14:15274942-15275045 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 53

Conread position: 282-435
Cow position: chr14:5529970-5529815 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 282-435
Cow position: chr14:20783363-20783209 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 52

Conread position: 282-440
Cow position: chr14:40168824-40168983 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 282-448
Cow position: chr14:13462427-13462262 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 51

Conread position: 282-452
Cow position: chr14:44255849-44256021 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 282-454
Cow position: chr14:29775168-29775347 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 282-465
Cow position: chr14:11153244-11153428 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 52

Conread position: 282-465
Cow position: chr14:44552756-44552576 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 282-494
Cow position: chr14:16918810-16919024 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-495
Cow position: chr14:45710816-45711030 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-496
Cow position: chr14:27978268-27978052 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 282-497
Cow position: chr14:16342918-16343128 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 185, 44

Conread position: 282-497
Cow position: chr14:29046777-29046994 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 282-497
Cow position: chr14:48826194-48825978 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 156

Conread position: 282-498
Cow position: chr14:13779853-13779628 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 44

Conread position: 282-498
Cow position: chr14:17000151-17000369 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 29

Conread position: 282-498
Cow position: chr14:22030537-22030755 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr14:32447699-32447482 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr14:37225099-37224881 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 44, 53

Conread position: 282-498
Cow position: chr14:38147912-38147698 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 88

Conread position: 282-498
Cow position: chr14:48253406-48253622 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr14:50111702-50111485 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr14:50139474-50139251 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 195

Conread position: 282-505
Cow position: chr14:30595461-30595686 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-505
Cow position: chr14:48601430-48601655 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 88

Conread position: 282-508
Cow position: chr14:45162935-45162713 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 27

Conread position: 282-509
Cow position: chr14:13274517-13274288 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 50

Conread position: 282-521
Cow position: chr14:13863188-13863422 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 104

Conread position: 282-525
Cow position: chr14:16272386-16272628 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 52

Conread position: 282-525
Cow position: chr14:38530550-38530791 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 201

Conread position: 282-525
Cow position: chr14:44775131-44775369 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 63

Conread position: 282-527
Cow position: chr14:21745008-21744768 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 106

Conread position: 282-528
Cow position: chr14:33677975-33677730 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 23

Conread position: 283-452
Cow position: chr14:48402242-48402412 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 141

Conread position: 283-488
Cow position: chr14:45678172-45678379 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 46

Conread position: 283-495
Cow position: chr14:43555882-43555674 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 43, 49

Conread position: 283-497
Cow position: chr14:46391624-46391840 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 283-523
Cow position: chr14:30705408-30705649 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 56

Conread position: 284-494
Cow position: chr14:10147779-10147567 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 48, 0

Conread position: 284-498
Cow position: chr14:17759974-17760190 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 50

Conread position: 284-504
Cow position: chr14:43559141-43558920 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 50, 104

Conread position: 284-505
Cow position: chr14:46466589-46466377 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 104

Conread position: 285-445
Cow position: chr14:10520594-10520753 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 113

Conread position: 285-457
Cow position: chr14:2285233-2285061 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 164

Conread position: 285-457
Cow position: chr14:12124279-12124451 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 164

Conread position: 285-463
Cow position: chr14:30736077-30735895 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 68

Conread position: 285-465
Cow position: chr14:12611335-12611159 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 109

Conread position: 285-465
Cow position: chr14:17490554-17490735 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 164

Conread position: 285-494
Cow position: chr14:751470-751260 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 149

Conread position: 285-494
Cow position: chr14:30584047-30584258 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr14:33392893-33393093 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 103

Conread position: 285-494
Cow position: chr14:45671142-45671353 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 285-495
Cow position: chr14:19327357-19327569 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 49

Conread position: 285-497
Cow position: chr14:1659360-1659146 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 50

Conread position: 285-497
Cow position: chr14:9046482-9046267 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 50

Conread position: 285-498
Cow position: chr14:12742163-12742378 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 49

Conread position: 285-498
Cow position: chr14:12900001-12899787 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 49

Conread position: 285-498
Cow position: chr14:46530125-46529912 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 25

Conread position: 285-504
Cow position: chr14:33402597-33402372 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 285-505
Cow position: chr14:13620236-13620458 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 50

Conread position: 286-447
Cow position: chr14:5513841-5513679 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 49

Conread position: 286-495
Cow position: chr14:35365365-35365565 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 286-523
Cow position: chr14:9514383-9514611 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 48

Conread position: 286-526
Cow position: chr14:2295192-2294950 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 52

Conread position: 287-526
Cow position: chr14:44689973-44689731 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 47

Conread position: 289-446
Cow position: chr14:23932514-23932356 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 46

Conread position: 290-494
Cow position: chr14:33604640-33604432 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 295-525
Cow position: chr14:44677006-44676788 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 22

Conread position: 299-459
Cow position: chr14:39722060-39722222 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 299-498
Cow position: chr14:40341947-40341743 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 300-518
Cow position: chr14:47925783-47925567 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 146

Conread position: 305-432
Cow position: chr14:38228749-38228875 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 306-498
Cow position: chr14:45081938-45081744 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 20, 28

Conread position: 306-507
Cow position: chr14:11561141-11561347 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 198

Conread position: 309-498
Cow position: chr14:46657808-46657619 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 25

Conread position: 310-483
Cow position: chr14:44378678-44378504 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 121

Conread position: 319-498
Cow position: chr14:45028121-45028301 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 15

Conread position: 336-447
Cow position: chr14:41409784-41409674 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 341-498
Cow position: chr14:45207153-45206996 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 87

Conread position: 353-524
Cow position: chr14:30666336-30666169 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 22

Show alignments to all cow chromosomes.