Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-150
Cow position: chr16:25258520-25258366 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 54

Conread position: 2-153
Cow position: chr16:34530998-34530851 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 47

Conread position: 2-155
Cow position: chr16:3330637-3330478 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 50

Conread position: 2-162
Cow position: chr16:406339-406505 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 148

Conread position: 2-162
Cow position: chr16:15185776-15185609 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 50

Conread position: 2-162
Cow position: chr16:16520066-16520228 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 50

Conread position: 2-162
Cow position: chr16:26664454-26664287 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 149

Conread position: 2-164
Cow position: chr16:838016-837847 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 2-165
Cow position: chr16:5890699-5890525 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 55

Conread position: 3-140
Cow position: chr16:51084852-51084711 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 3-158
Cow position: chr16:16229017-16228857 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 37

Conread position: 3-158
Cow position: chr16:49233936-49234099 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 4-158
Cow position: chr16:49221202-49221350 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 5-158
Cow position: chr16:16898147-16897990 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 42

Conread position: 5-158
Cow position: chr16:23809018-23808861 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 47

Conread position: 18-162
Cow position: chr16:56916386-56916536 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 34

Conread position: 282-435
Cow position: chr16:25456912-25457061 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 51

Conread position: 282-446
Cow position: chr16:5890561-5890398 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 28

Conread position: 282-450
Cow position: chr16:27732813-27732983 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 52

Conread position: 282-457
Cow position: chr16:41162506-41162681 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 50, 71

Conread position: 282-465
Cow position: chr16:49255664-49255838 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 6

Conread position: 282-486
Cow position: chr16:2726663-2726867 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-488
Cow position: chr16:11110480-11110685 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 147

Conread position: 282-492
Cow position: chr16:55049308-55049514 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 9

Conread position: 282-494
Cow position: chr16:56916505-56916714 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 106

Conread position: 282-497
Cow position: chr16:3088639-3088852 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 106

Conread position: 282-497
Cow position: chr16:3330504-3330287 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position: chr16:23251871-23252088 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position: chr16:23983862-23983645 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:337733-337515 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 177

Conread position: 282-498
Cow position: chr16:406474-406690 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:1566889-1567104 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:2410402-2410617 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 44, 104

Conread position: 282-498
Cow position: chr16:2482573-2482788 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:7675892-7676109 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:8815538-8815756 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 282-498
Cow position: chr16:10438818-10438601 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 282-498
Cow position: chr16:15185640-15185420 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 173

Conread position: 282-498
Cow position: chr16:15567824-15567604 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 54

Conread position: 282-498
Cow position: chr16:20202560-20202348 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 24

Conread position: 282-498
Cow position: chr16:23535324-23535542 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:25086183-25085963 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 52

Conread position: 282-498
Cow position: chr16:25442193-25441979 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 80

Conread position: 282-498
Cow position: chr16:26105495-26105714 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 23

Conread position: 282-498
Cow position: chr16:26664318-26664101 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr16:27714248-27714452 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 29

Conread position: 282-498
Cow position: chr16:41166087-41166297 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 182, 36

Conread position: 282-504
Cow position: chr16:26978694-26978482 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 79

Conread position: 282-509
Cow position: chr16:16270568-16270804 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 0

Conread position: 282-509
Cow position: chr16:51084722-51084488 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 161

Conread position: 282-522
Cow position: chr16:29047588-29047346 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-523
Cow position: chr16:837882-837646 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 28

Conread position: 282-523
Cow position: chr16:4478404-4478647 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 52

Conread position: 282-525
Cow position: chr16:15477409-15477168 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 157

Conread position: 282-525
Cow position: chr16:15494070-15493830 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 45, 52

Conread position: 283-497
Cow position: chr16:1860778-1860568 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 47

Conread position: 283-498
Cow position: chr16:19638626-19638409 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 203

Conread position: 283-526
Cow position: chr16:18497736-18497962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 62

Conread position: 284-489
Cow position: chr16:25171911-25171705 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 110

Conread position: 285-430
Cow position: chr16:19779089-19779232 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 65

Conread position: 285-431
Cow position: chr16:25342521-25342374 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 49

Conread position: 285-441
Cow position: chr16:25001729-25001892 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 151

Conread position: 285-494
Cow position: chr16:11284155-11283944 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr16:21186178-21185967 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr16:25189211-25189001 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 149

Conread position: 285-497
Cow position: chr16:10375038-10375250 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 18

Conread position: 285-497
Cow position: chr16:28169791-28170010 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 63

Conread position: 285-497
Cow position: chr16:37480577-37480789 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 49

Conread position: 285-498
Cow position: chr16:16898021-16897805 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 50

Conread position: 285-498
Cow position: chr16:43896711-43896926 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 49

Conread position: 285-498
Cow position: chr16:49234068-49234283 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 95

Conread position: 285-508
Cow position: chr16:41762401-41762181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 171

Conread position: 285-509
Cow position: chr16:42735828-42736056 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 285-523
Cow position: chr16:49221319-49221553 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 72

Conread position: 286-438
Cow position: chr16:32936875-32936723 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 66

Conread position: 286-440
Cow position: chr16:54324773-54324928 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 286-453
Cow position: chr16:5662397-5662225 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 129

Conread position: 286-489
Cow position: chr16:47474820-47474607 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 286-497
Cow position: chr16:28196683-28196893 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 187

Conread position: 286-498
Cow position: chr16:1432752-1432539 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 40, 28

Conread position: 286-498
Cow position: chr16:5485292-5485079 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 8

Conread position: 286-498
Cow position: chr16:40295611-40295826 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 49

Conread position: 287-491
Cow position: chr16:17056408-17056616 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 66

Conread position: 287-511
Cow position: chr16:29034628-29034399 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 288-470
Cow position: chr16:10581988-10581810 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 26

Conread position: 288-488
Cow position: chr16:41754899-41755102 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 288-494
Cow position: chr16:27594067-27593859 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 288-509
Cow position: chr16:23808889-23808672 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 98

Conread position: 291-442
Cow position: chr16:20331338-20331188 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 43

Conread position: 291-488
Cow position: chr16:55160625-55160821 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 43

Conread position: 295-496
Cow position: chr16:23671250-23671048 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 114

Conread position: 298-446
Cow position: chr16:29984629-29984486 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 36

Conread position: 299-488
Cow position: chr16:10967798-10967975 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 27

Conread position: 303-497
Cow position: chr16:29089749-29089945 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 19

Conread position: 305-494
Cow position: chr16:14665266-14665455 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 29

Conread position: 305-498
Cow position: chr16:31591373-31591566 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 29

Conread position: 318-526
Cow position: chr16:19151086-19151290 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 16

Conread position: 328-505
Cow position: chr16:28470585-28470759 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 330-464
Cow position: chr16:9209480-9209346 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 331-498
Cow position: chr16:7464345-7464176 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 133, 0

Show alignments to all cow chromosomes.