Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-145
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 48

Conread position: 2-155
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 2-158
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 50

Conread position: 2-158
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 47

Conread position: 2-162
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 152

Conread position: 2-164
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-161
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 45

Conread position: 3-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 3-162
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 49

Conread position: 3-162
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 49

Conread position: 4-162
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 48

Conread position: 5-162
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 148

Conread position: 281-505
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 53

Conread position: 282-383
Cow position:
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 52

Conread position: 282-441
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 52

Conread position: 282-441
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 96

Conread position: 282-443
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 113

Conread position: 282-446
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 282-446
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 282-450
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-451
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 80

Conread position: 282-465
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 16

Conread position: 282-468
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 71

Conread position: 282-469
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 52

Conread position: 282-495
Cow position:
Alignm length: 215
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 173

Conread position: 282-495
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 68

Conread position: 282-496
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-496
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 186

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 21

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 104

Conread position: 282-498
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 141

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 6

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 50

Conread position: 282-498
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 55

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 9

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 52

Conread position: 282-505
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 52

Conread position: 282-509
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 106

Conread position: 282-509
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 28

Conread position: 282-509
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 51

Conread position: 282-510
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 282-516
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 60

Conread position: 282-517
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 282-521
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-522
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 15

Conread position: 282-525
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 42

Conread position: 282-526
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 131

Conread position: 282-526
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 53

Conread position: 282-526
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 79

Conread position: 282-527
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 58

Conread position: 282-528
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 84

Conread position: 283-440
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 27

Conread position: 283-497
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 49, 84

Conread position: 283-509
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 69

Conread position: 284-434
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 284-465
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 26

Conread position: 284-495
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 183

Conread position: 285-442
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 103

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 164

Conread position: 285-457
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 49

Conread position: 285-481
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 99

Conread position: 285-489
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 285-491
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 285-494
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 47, 66

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 103

Conread position: 285-496
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 285-496
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 40

Conread position: 285-497
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 33

Conread position: 285-497
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 179, 119

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 285-498
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 118

Conread position: 285-498
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 49

Conread position: 285-498
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 50

Conread position: 285-504
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 49

Conread position: 285-504
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 26

Conread position: 285-505
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 44

Conread position: 285-521
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 104

Conread position: 285-526
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 66

Conread position: 286-448
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 146

Conread position: 286-465
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 286-494
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 112

Conread position: 286-497
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 107

Conread position: 286-497
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 48

Conread position: 286-498
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 100

Conread position: 286-498
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 48

Conread position: 286-498
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 44

Conread position: 286-498
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 286-505
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 48

Conread position: 286-515
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 102

Conread position: 286-525
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 100

Conread position: 287-451
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 48

Conread position: 287-498
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 14

Conread position: 287-526
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 76

Conread position: 289-491
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 38

Conread position: 290-491
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 290-523
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 44

Conread position: 304-496
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 304-498
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 135

Conread position: 305-494
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 305-523
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 30

Conread position: 306-465
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 307-450
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 311-498
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 39

Conread position: 331-497
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 136, 56

Conread position: 331-501
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 134, 124

Conread position: 331-506
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 133, 0

Conread position: 332-481
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 140

Conread position: 336-495
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 92, 49

Conread position: 343-527
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 11

Conread position: 344-481
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 109

Conread position: 358-523
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 39

Show alignments to all cow chromosomes.