Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-151
Cow position: chr22:1268366-1268522 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 50

Conread position: 2-161
Cow position: chr22:8120701-8120860 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 70

Conread position: 2-162
Cow position: chr22:559318-559485 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 149

Conread position: 2-162
Cow position: chr22:34169727-34169561 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 148

Conread position: 2-162
Cow position: chr22:36860161-36860317 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 58

Conread position: 2-162
Cow position: chr22:38550771-38550613 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 50

Conread position: 2-162
Cow position: chr22:46614690-46614525 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 138

Conread position: 3-162
Cow position: chr22:13773906-13773746 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 104

Conread position: 4-189
Cow position: chr22:1281349-1281533 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 48

Conread position: 249-525
Cow position: chr22:37133936-37133665 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 251-505
Cow position: chr22:37141184-37140927 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 282-424
Cow position: chr22:44397686-44397543 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 52

Conread position: 282-446
Cow position: chr22:45510287-45510453 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 57

Conread position: 282-457
Cow position: chr22:325936-326111 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 167

Conread position: 282-465
Cow position: chr22:13547520-13547702 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 15

Conread position: 282-488
Cow position: chr22:40378980-40378769 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 37

Conread position: 282-489
Cow position: chr22:18028539-18028332 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 70

Conread position: 282-495
Cow position: chr22:1268502-1268723 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 282-497
Cow position: chr22:538357-538142 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 109

Conread position: 282-497
Cow position: chr22:559454-559671 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position: chr22:10908585-10908798 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 129

Conread position: 282-497
Cow position: chr22:12730434-12730651 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 282-497
Cow position: chr22:13773777-13773571 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 41

Conread position: 282-497
Cow position: chr22:30677434-30677647 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 151

Conread position: 282-497
Cow position: chr22:37268419-37268197 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 282-498
Cow position: chr22:283819-284036 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 32

Conread position: 282-498
Cow position: chr22:1519766-1519985 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:3803436-3803222 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 50, 70

Conread position: 282-498
Cow position: chr22:6332963-6332745 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:8120827-8121045 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:8737089-8737295 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 140, 41

Conread position: 282-498
Cow position: chr22:17327203-17327421 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:18815112-18815330 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:21035136-21035353 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:21590588-21590373 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 104

Conread position: 282-498
Cow position: chr22:31333794-31334012 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:34169592-34169374 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 44

Conread position: 282-498
Cow position: chr22:37292422-37292629 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 182, 44

Conread position: 282-498
Cow position: chr22:39468267-39468483 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:44477876-44477657 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 282-498
Cow position: chr22:44935223-44935005 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr22:45582169-45581961 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 66

Conread position: 282-500
Cow position: chr22:316766-316542 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 25

Conread position: 282-504
Cow position: chr22:6501884-6502109 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 282-509
Cow position: chr22:36860286-36860515 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 44

Conread position: 282-514
Cow position: chr22:2394735-2394968 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 54

Conread position: 282-522
Cow position: chr22:1281466-1281716 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 285-423
Cow position: chr22:24951805-24951667 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 133

Conread position: 285-445
Cow position: chr22:7304406-7304566 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 33

Conread position: 285-494
Cow position: chr22:6021915-6021703 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr22:11803803-11804014 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr22:19320264-19320053 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr22:19536801-19536593 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 48

Conread position: 285-497
Cow position: chr22:3277109-3277323 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position: chr22:27308526-27308740 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 49

Conread position: 285-497
Cow position: chr22:44492303-44492089 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 285-498
Cow position: chr22:694872-694657 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-498
Cow position: chr22:42992425-42992209 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 285-505
Cow position: chr22:1323458-1323235 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 50

Conread position: 285-506
Cow position: chr22:24537008-24536788 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 26

Conread position: 285-509
Cow position: chr22:36185010-36184785 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 49

Conread position: 285-526
Cow position: chr22:1880052-1879812 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 33

Conread position: 286-494
Cow position: chr22:20239592-20239802 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 286-497
Cow position: chr22:19142440-19142653 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 51

Conread position: 286-498
Cow position: chr22:3305348-3305542 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 179, 42

Conread position: 286-498
Cow position: chr22:46580470-46580684 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 286-523
Cow position: chr22:35906141-35906369 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 287-465
Cow position: chr22:23800955-23801130 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 56

Conread position: 287-491
Cow position: chr22:3272920-3273124 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 40

Conread position: 287-497
Cow position: chr22:15053960-15053754 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 80

Conread position: 287-498
Cow position: chr22:522147-522359 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 95

Conread position: 294-497
Cow position: chr22:36270443-36270239 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 187

Conread position: 295-465
Cow position: chr22:6601993-6602164 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 295-465
Cow position: chr22:21195251-21195422 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 39

Conread position: 300-460
Cow position: chr22:33351914-33351754 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 305-498
Cow position: chr22:11032979-11032783 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 331-491
Cow position: chr22:290499-290660 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 331-498
Cow position: chr22:15312747-15312914 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 73

Conread position: 331-508
Cow position: chr22:41418120-41418299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 340-494
Cow position: chr22:46613057-46612902 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 351-495
Cow position: chr22:16202112-16201967 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 0

Show alignments to all cow chromosomes.