Cow genome map
| Conread name: | Ss1.1-Pig2-51E21.5 |
| Conread position: | 2-161 |
| Cow position: | chr25:18273336-18273502 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 148 |
| Conread position: | 2-162 |
| Cow position: | chr25:17655867-17655709 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 2-162 |
| Cow position: | chr25:18486126-18486290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 2-167 |
| Cow position: | chr25:21902470-21902294 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 281-523 |
| Cow position: | chr25:34345703-34345946 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 282-495 |
| Cow position: | chr25:17588257-17588471 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 282-496 |
| Cow position: | chr25:18192461-18192678 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 282-496 |
| Cow position: | chr25:33575881-33576100 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 282-497 |
| Cow position: | chr25:11041666-11041449 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-497 |
| Cow position: | chr25:19921831-19921618 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 282-497 |
| Cow position: | chr25:27021291-27021503 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 282-498 |
| Cow position: | chr25:18273472-18273687 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 50 |
| Conread position: | 282-498 |
| Cow position: | chr25:18305438-18305230 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 282-498 |
| Cow position: | chr25:18888442-18888661 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 282-498 |
| Cow position: | chr25:20630929-20630717 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 282-498 |
| Cow position: | chr25:24658913-24659131 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr25:34506389-34506607 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-506 |
| Cow position: | chr25:17655740-17655513 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 282-506 |
| Cow position: | chr25:36636386-36636605 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 282-509 |
| Cow position: | chr25:14957150-14957379 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 282-509 |
| Cow position: | chr25:26899983-26899754 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-525 |
| Cow position: | chr25:22148836-22148600 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-525 |
| Cow position: | chr25:25508002-25507761 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 283-491 |
| Cow position: | chr25:13454287-13454490 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 283-506 |
| Cow position: | chr25:24216175-24216387 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 159, 43 |
| Conread position: | 284-498 |
| Cow position: | chr25:18177992-18177780 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 285-385 |
| Cow position: | chr25:13062413-13062514 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-431 |
| Cow position: | chr25:13693372-13693519 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-494 |
| Cow position: | chr25:20774075-20774291 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 285-498 |
| Cow position: | chr25:12941375-12941591 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 286-497 |
| Cow position: | chr25:15365248-15365037 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 286-497 |
| Cow position: | chr25:26928596-26928387 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 290-495 |
| Cow position: | chr25:18212616-18212824 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 291-505 |
| Cow position: | chr25:13782324-13782109 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 295-467 |
| Cow position: | chr25:18450598-18450433 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 295-488 |
| Cow position: | chr25:30266780-30266590 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 295-497 |
| Cow position: | chr25:11931494-11931696 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 305-446 |
| Cow position: | chr25:17559284-17559426 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 305-525 |
| Cow position: | chr25:12757809-12758029 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 362-526 |
| Cow position: | chr25:27524925-27525089 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 103, 66 |
Show alignments to all cow chromosomes.