Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 2-162
Cow position: chr29:5236417-5236248 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 151

Conread position: 2-162
Cow position: chr29:19621881-19622048 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 149

Conread position: 2-162
Cow position: chr29:19655020-19654861 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 37

Conread position: 2-162
Cow position: chr29:40501602-40501768 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 148

Conread position: 2-164
Cow position: chr29:9642391-9642560 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 50

Conread position: 279-504
Cow position: chr29:32892058-32891827 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 282-448
Cow position: chr29:16345472-16345304 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 52

Conread position: 282-465
Cow position: chr29:32287450-32287262 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 57

Conread position: 282-472
Cow position: chr29:32804681-32804494 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 65

Conread position: 282-493
Cow position: chr29:2840080-2840287 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 44, 52

Conread position: 282-495
Cow position: chr29:8664773-8664574 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 50, 106

Conread position: 282-495
Cow position: chr29:38237260-38237472 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 31

Conread position: 282-495
Cow position: chr29:45586115-45586331 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 53

Conread position: 282-498
Cow position: chr29:47173-47391 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 53

Conread position: 282-498
Cow position: chr29:252011-251793 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 29

Conread position: 282-498
Cow position: chr29:5981445-5981668 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 137, 0

Conread position: 282-498
Cow position: chr29:10646984-10647202 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:10822718-10822935 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 51

Conread position: 282-498
Cow position: chr29:14210306-14210522 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 62

Conread position: 282-498
Cow position: chr29:14587183-14586970 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:19622017-19622235 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:19654892-19654675 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 44, 50

Conread position: 282-498
Cow position: chr29:21425751-21425978 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:25931265-25931484 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 53

Conread position: 282-498
Cow position: chr29:26163571-26163786 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:39078442-39078658 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position: chr29:42803676-42803461 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-522
Cow position: chr29:34525505-34525263 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 84

Conread position: 282-526
Cow position: chr29:23977389-23977148 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 51

Conread position: 282-527
Cow position: chr29:32541360-32541118 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 283-446
Cow position: chr29:13622592-13622757 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 38

Conread position: 285-444
Cow position: chr29:35298079-35297919 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:3328596-3328385 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:7845649-7845438 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:18855688-18855899 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:31096120-31096331 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:31182665-31182455 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 20

Conread position: 285-494
Cow position: chr29:35814713-35814924 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position: chr29:38207414-38207624 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 6

Conread position: 285-494
Cow position: chr29:42938934-42939146 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position: chr29:38228240-38228026 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 285-498
Cow position: chr29:5958851-5958638 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 28

Conread position: 285-498
Cow position: chr29:20252429-20252214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 285-503
Cow position: chr29:42093022-42092805 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 149

Conread position: 285-505
Cow position: chr29:14084866-14085086 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 144

Conread position: 285-523
Cow position: chr29:2465594-2465833 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 49

Conread position: 285-523
Cow position: chr29:16111648-16111411 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 149

Conread position: 285-526
Cow position: chr29:45461004-45460753 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 49

Conread position: 286-446
Cow position: chr29:668809-668970 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 286-446
Cow position: chr29:3699213-3699056 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 28

Conread position: 286-450
Cow position: chr29:5236275-5236113 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 286-453
Cow position: chr29:32558495-32558668 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 286-494
Cow position: chr29:27979664-27979873 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 108

Conread position: 286-497
Cow position: chr29:13583340-13583127 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 286-498
Cow position: chr29:8774055-8774266 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 122

Conread position: 286-498
Cow position: chr29:16023820-16023617 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 178, 41

Conread position: 286-498
Cow position: chr29:43323814-43323607 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 178, 35

Conread position: 286-498
Cow position: chr29:45205760-45205547 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 48

Conread position: 286-507
Cow position: chr29:10850011-10849792 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 44

Conread position: 288-506
Cow position: chr29:14449155-14448933 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 54

Conread position: 290-522
Cow position: chr29:15997397-15997632 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 90

Conread position: 295-521
Cow position: chr29:27262645-27262869 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 21, 112

Conread position: 296-520
Cow position: chr29:34798558-34798782 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 30, 39

Conread position: 304-497
Cow position: chr29:19886319-19886127 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 37

Conread position: 305-449
Cow position: chr29:801158-801303 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 305-498
Cow position: chr29:647031-646842 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 8

Conread position: 305-498
Cow position: chr29:7429976-7430171 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 29

Conread position: 305-504
Cow position: chr29:13651292-13651099 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 29

Conread position: 308-498
Cow position: chr29:2747201-2747389 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 80

Conread position: 334-515
Cow position: chr29:16173013-16173207 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 336-452
Cow position: chr29:42710468-42710583 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 349-497
Cow position: chr29:34754414-34754269 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 39

Show alignments to all cow chromosomes.