Cow genome map
| Conread name: | Ss1.1-Pig2-51E21.5 |
| Conread position: | 2-155 |
| Cow position: | chr3:2906457-2906621 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-161 |
| Cow position: | chr3:72671216-72671378 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 2-162 |
| Cow position: | chr3:2709555-2709723 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 150 |
| Conread position: | 2-162 |
| Cow position: | chr3:15054385-15054542 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 157, 47 |
| Conread position: | 2-162 |
| Cow position: | chr3:15181670-15181500 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 2-162 |
| Cow position: | chr3:18354697-18354859 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 2-162 |
| Cow position: | chr3:31416332-31416165 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 2-162 |
| Cow position: | chr3:49543892-49544060 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 2-162 |
| Cow position: | chr3:58948849-58948685 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 2-164 |
| Cow position: | chr3:595448-595277 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-167 |
| Cow position: | chr3:6876862-6877037 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 3-143 |
| Cow position: | chr3:63240935-63241075 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 3-158 |
| Cow position: | chr3:24588153-24588314 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 3-162 |
| Cow position: | chr3:2854135-2854296 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 4-158 |
| Cow position: | chr3:48229165-48229329 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 13-162 |
| Cow position: | chr3:33634402-33634248 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 19-155 |
| Cow position: | chr3:6687092-6686954 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 272-425 |
| Cow position: | chr3:63255326-63255175 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 275-496 |
| Cow position: | chr3:56100498-56100723 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 278-490 |
| Cow position: | chr3:37626168-37625966 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 282-383 |
| Cow position: | chr3:38867494-38867392 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-427 |
| Cow position: | chr3:47087479-47087333 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-429 |
| Cow position: | chr3:33634279-33634138 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 282-435 |
| Cow position: | chr3:5884712-5884557 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 282-435 |
| Cow position: | chr3:49136393-49136547 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-435 |
| Cow position: | chr3:72631241-72631088 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 282-465 |
| Cow position: | chr3:9401418-9401600 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 282-465 |
| Cow position: | chr3:18354828-18355014 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 282-465 |
| Cow position: | chr3:64016194-64016379 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-481 |
| Cow position: | chr3:36877480-36877680 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-482 |
| Cow position: | chr3:2854265-2854467 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 282-484 |
| Cow position: | chr3:2906595-2906798 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 198 |
| Conread position: | 282-489 |
| Cow position: | chr3:5993909-5994120 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-494 |
| Cow position: | chr3:4287265-4287051 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 282-495 |
| Cow position: | chr3:3057985-3057770 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 282-495 |
| Cow position: | chr3:7478743-7478958 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-495 |
| Cow position: | chr3:46860114-46860325 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 282-497 |
| Cow position: | chr3:2709692-2709908 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 282-497 |
| Cow position: | chr3:30617744-30617961 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 282-497 |
| Cow position: | chr3:34029749-34029964 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-497 |
| Cow position: | chr3:37970222-37970005 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 282-497 |
| Cow position: | chr3:40338972-40339186 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 282-497 |
| Cow position: | chr3:66621359-66621145 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-497 |
| Cow position: | chr3:66889791-66890008 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:10240839-10240621 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:18812677-18812462 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:19755756-19755974 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:19940068-19939851 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:40824569-40824351 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:56327069-56326853 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 282-498 |
| Cow position: | chr3:59862557-59862338 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-498 |
| Cow position: | chr3:78026233-78026458 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-504 |
| Cow position: | chr3:6686980-6686764 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 35 |
| Conread position: | 282-504 |
| Cow position: | chr3:15181531-15181318 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 282-506 |
| Cow position: | chr3:6662535-6662310 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 282-506 |
| Cow position: | chr3:39879833-39880051 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 282-508 |
| Cow position: | chr3:53516780-53516555 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-517 |
| Cow position: | chr3:24347131-24346905 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 182, 44 |
| Conread position: | 282-519 |
| Cow position: | chr3:595313-595077 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-520 |
| Cow position: | chr3:40343302-40343062 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 282-523 |
| Cow position: | chr3:67164466-67164227 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 218 |
| Conread position: | 282-525 |
| Cow position: | chr3:21181518-21181760 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-525 |
| Cow position: | chr3:49544029-49544270 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-525 |
| Cow position: | chr3:57483551-57483790 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 282-526 |
| Cow position: | chr3:24444897-24445139 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 282-526 |
| Cow position: | chr3:30315737-30315497 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 219 |
| Conread position: | 282-527 |
| Cow position: | chr3:50916519-50916266 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 283-465 |
| Cow position: | chr3:25499506-25499694 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 283-491 |
| Cow position: | chr3:12678666-12678872 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 283-497 |
| Cow position: | chr3:19720501-19720718 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 283-497 |
| Cow position: | chr3:32612264-32612486 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 285-435 |
| Cow position: | chr3:5953021-5953169 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-438 |
| Cow position: | chr3:45975672-45975518 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-439 |
| Cow position: | chr3:77424795-77424643 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 285-446 |
| Cow position: | chr3:2368164-2368326 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-446 |
| Cow position: | chr3:19879819-19879657 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-446 |
| Cow position: | chr3:20382201-20382038 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-451 |
| Cow position: | chr3:56295361-56295194 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-457 |
| Cow position: | chr3:3524197-3524025 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-457 |
| Cow position: | chr3:29330116-29330288 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 164 |
| Conread position: | 285-457 |
| Cow position: | chr3:30330947-30331120 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 165 |
| Conread position: | 285-457 |
| Cow position: | chr3:32621867-32622038 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 285-457 |
| Cow position: | chr3:35964159-35963987 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 164 |
| Conread position: | 285-457 |
| Cow position: | chr3:64026962-64027134 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-457 |
| Cow position: | chr3:74058704-74058532 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 285-465 |
| Cow position: | chr3:18943208-18943026 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 285-494 |
| Cow position: | chr3:2918641-2918429 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 285-494 |
| Cow position: | chr3:7157547-7157758 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 285-494 |
| Cow position: | chr3:7170376-7170166 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 47, 149 |
| Conread position: | 285-494 |
| Cow position: | chr3:27919600-27919389 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-494 |
| Cow position: | chr3:34506170-34506381 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-494 |
| Cow position: | chr3:36863285-36863496 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-494 |
| Cow position: | chr3:47177095-47177306 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-494 |
| Cow position: | chr3:57753973-57753762 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-495 |
| Cow position: | chr3:41209429-41209641 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-497 |
| Cow position: | chr3:15054506-15054709 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 285-497 |
| Cow position: | chr3:18860590-18860376 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-497 |
| Cow position: | chr3:19799999-19800213 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-497 |
| Cow position: | chr3:47080237-47080451 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-497 |
| Cow position: | chr3:70888313-70888104 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 129 |
| Conread position: | 285-498 |
| Cow position: | chr3:24644405-24644194 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 285-498 |
| Cow position: | chr3:42448284-42448069 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-498 |
| Cow position: | chr3:55892588-55892374 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 138, 19 |
| Conread position: | 285-498 |
| Cow position: | chr3:56146489-56146274 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-498 |
| Cow position: | chr3:56339243-56339454 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-522 |
| Cow position: | chr3:46503731-46503492 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 285-523 |
| Cow position: | chr3:6876996-6877226 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 285-526 |
| Cow position: | chr3:2869961-2869725 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 285-526 |
| Cow position: | chr3:42994502-42994736 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 286-489 |
| Cow position: | chr3:83231963-83232163 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 286-494 |
| Cow position: | chr3:48843426-48843217 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 286-497 |
| Cow position: | chr3:6783540-6783328 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 137 |
| Conread position: | 286-497 |
| Cow position: | chr3:49270932-49271150 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 286-498 |
| Cow position: | chr3:23289159-23289372 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 286-498 |
| Cow position: | chr3:63200786-63200570 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 286-504 |
| Cow position: | chr3:64356626-64356841 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 286-509 |
| Cow position: | chr3:63002372-63002591 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 287-446 |
| Cow position: | chr3:7247709-7247555 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 287-459 |
| Cow position: | chr3:23207246-23207419 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 287-488 |
| Cow position: | chr3:38494413-38494209 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 287-494 |
| Cow position: | chr3:64651808-64651599 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 287-497 |
| Cow position: | chr3:68698802-68699007 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 288-498 |
| Cow position: | chr3:48058191-48058395 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 288-508 |
| Cow position: | chr3:19945410-19945195 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 288-521 |
| Cow position: | chr3:46346663-46346890 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 212, 33 |
| Conread position: | 290-486 |
| Cow position: | chr3:65208367-65208169 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 291-438 |
| Cow position: | chr3:53412297-53412149 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 292-525 |
| Cow position: | chr3:11198382-11198615 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 294-460 |
| Cow position: | chr3:16075659-16075495 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 295-465 |
| Cow position: | chr3:56635761-56635591 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 295-494 |
| Cow position: | chr3:29579791-29579593 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 295-525 |
| Cow position: | chr3:48229309-48229541 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 296-494 |
| Cow position: | chr3:1742495-1742297 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 296-498 |
| Cow position: | chr3:75039995-75040199 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 305-526 |
| Cow position: | chr3:46017199-46016982 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 311-441 |
| Cow position: | chr3:54772002-54771871 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 325-526 |
| Cow position: | chr3:50126475-50126677 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 330-504 |
| Cow position: | chr3:45864970-45865144 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 35 |
| Conread position: | 331-494 |
| Cow position: | chr3:63914984-63915149 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 332-465 |
| Cow position: | chr3:48560828-48560965 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.