Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 1-162
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 52

Conread position: 1-162
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 35

Conread position: 2-143
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 44

Conread position: 2-158
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 38

Conread position: 2-160
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 50

Conread position: 2-161
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 50

Conread position: 2-162
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 50

Conread position: 2-164
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 50

Conread position: 3-158
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 48

Conread position: 3-162
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 24

Conread position: 4-143
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 75, 44

Conread position: 4-161
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 147

Conread position: 4-162
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 49

Conread position: 5-148
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 47

Conread position: 276-475
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 150

Conread position: 281-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 30

Conread position: 281-498
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 54

Conread position: 282-382
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 282-391
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 51

Conread position: 282-438
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 141

Conread position: 282-453
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-454
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 52

Conread position: 282-465
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 37

Conread position: 282-481
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 24

Conread position: 282-485
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 71

Conread position: 282-486
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 21

Conread position: 282-486
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 52

Conread position: 282-494
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 50

Conread position: 282-497
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 132

Conread position: 282-497
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 85

Conread position: 282-497
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 68

Conread position: 282-497
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 152

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 52

Conread position: 282-498
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 54

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 185, 22

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-504
Cow position:
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 53

Conread position: 282-505
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 44, 36

Conread position: 282-506
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 81

Conread position: 282-508
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 91

Conread position: 282-509
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 174

Conread position: 282-518
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 48

Conread position: 282-520
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 112

Conread position: 282-522
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 282-525
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 53

Conread position: 282-525
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 52

Conread position: 282-525
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 71

Conread position: 282-525
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-525
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-526
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 53

Conread position: 282-526
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 52

Conread position: 282-526
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 189, 34

Conread position: 283-443
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 44

Conread position: 283-446
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 110

Conread position: 283-456
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 283-491
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 15

Conread position: 283-491
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 27

Conread position: 283-494
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 27

Conread position: 283-498
Cow position:
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 106

Conread position: 283-498
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 285-385
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 285-426
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 32

Conread position: 285-443
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 49

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 164

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 164

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 20

Conread position: 285-472
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 285-493
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 120

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 67

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 17

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 102

Conread position: 285-497
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 49

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 49

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 285-498
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 49

Conread position: 285-526
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 129

Conread position: 286-439
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 102

Conread position: 286-494
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 286-495
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 136, 39

Conread position: 286-506
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 181, 42

Conread position: 287-522
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 39, 47

Conread position: 288-491
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 31

Conread position: 288-497
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 82

Conread position: 288-498
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 23

Conread position: 288-524
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 291-497
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 291-523
Cow position:
Alignm length: 242
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 217

Conread position: 294-494
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 304-494
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 304-525
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 30

Conread position: 305-498
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 124

Conread position: 308-525
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 25

Conread position: 313-494
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 342-509
Cow position:
Alignm length: 168
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 350-494
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 353-522
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 22

Conread position: 374-498
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.