Cow genome map

Conread name: Ss1.1-Pig2-51E21.5

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-162
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 43

Conread position: 2-143
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 31

Conread position: 2-155
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 44

Conread position: 2-158
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 2-161
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 104

Conread position: 2-162
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 50

Conread position: 2-162
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 38

Conread position: 2-167
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 34

Conread position: 3-161
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 53

Conread position: 3-162
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 148

Conread position: 3-162
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 37, 109

Conread position: 4-164
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 42

Conread position: 44-494
Cow position:
Alignm length: 459
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 245-526
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 275-465
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 275-481
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 91

Conread position: 275-498
Cow position:
Alignm length: 225
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 185, 76

Conread position: 276-504
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 50

Conread position: 281-440
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 81

Conread position: 281-509
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 46, 36

Conread position: 282-430
Cow position:
Alignm length: 151
Alignm identity: 126
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 28

Conread position: 282-435
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 52

Conread position: 282-435
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 52

Conread position: 282-438
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 282-443
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 106

Conread position: 282-451
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 30

Conread position: 282-457
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 152

Conread position: 282-463
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 70

Conread position: 282-472
Cow position:
Alignm length: 195
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-488
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 29

Conread position: 282-494
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 125

Conread position: 282-495
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 35

Conread position: 282-495
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 20

Conread position: 282-495
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 16

Conread position: 282-496
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 185, 154

Conread position: 282-497
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 21

Conread position: 282-497
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 52

Conread position: 282-497
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 55

Conread position: 282-497
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 31

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 159

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 53

Conread position: 282-498
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 44, 164

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 116

Conread position: 282-498
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 52

Conread position: 282-498
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 80

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 48

Conread position: 282-498
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 19

Conread position: 282-505
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 148

Conread position: 282-505
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 44, 52

Conread position: 282-509
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 63

Conread position: 282-509
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 52

Conread position: 282-509
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-519
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 52

Conread position: 282-523
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 29

Conread position: 282-523
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-523
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-523
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 185, 35

Conread position: 282-523
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 53

Conread position: 282-525
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 282-525
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 52

Conread position: 282-525
Cow position:
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 282-528
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 283-455
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 43, 151

Conread position: 283-491
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 161

Conread position: 283-494
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 283-497
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 283-498
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 284-441
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 50

Conread position: 284-491
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 32

Conread position: 284-494
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 42, 49

Conread position: 285-422
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 49

Conread position: 285-445
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 50

Conread position: 285-456
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 59

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 164

Conread position: 285-457
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 164

Conread position: 285-465
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 285-465
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 49

Conread position: 285-491
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 121

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 49

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 285-494
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 150

Conread position: 285-494
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 171

Conread position: 285-494
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 285-497
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 49

Conread position: 285-497
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 68

Conread position: 285-497
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 47, 20

Conread position: 285-519
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 27

Conread position: 285-523
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 59

Conread position: 285-526
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 216

Conread position: 285-526
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 179, 33

Conread position: 285-526
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 286-426
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 286-438
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 23

Conread position: 286-494
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 286-494
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 195

Conread position: 286-503
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 48

Conread position: 286-525
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 48

Conread position: 289-504
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 129

Conread position: 292-431
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 295-498
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 59

Conread position: 297-493
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 37

Conread position: 298-496
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 136

Conread position: 299-510
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 79

Conread position: 305-498
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 29

Conread position: 308-498
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 26

Conread position: 314-498
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 20

Conread position: 324-493
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 139

Conread position: 330-507
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 36

Conread position: 331-526
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 134, 29

Conread position: 362-525
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 18

Conread position: 364-498
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Show alignments to all cow chromosomes.