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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-51E21.5
        

               
Conread position:
               
2-140
               

               
Cow position:
               
chrX:28650357-28650503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chrX:17666601-17666759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chrX:36136373-36136533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:8610511-8610674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:15486587-15486744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:21590180-21590020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:26529160-26529002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:27592794-27592959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:27962046-27961882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chrX:34219494-34219330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chrX:44388952-44388782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chrX:29286622-29286461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chrX:41850021-41850180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
8-143
               

               
Cow position:
               
chrX:15144722-15144863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
271-453
               

               
Cow position:
               
chrX:26773465-26773648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
275-423
               

               
Cow position:
               
chrX:46235807-46235659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
281-497
               

               
Cow position:
               
chrX:16463259-16463474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
282-384
               

               
Cow position:
               
chrX:5356765-5356868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-386
               

               
Cow position:
               
chrX:21643847-21643952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-393
               

               
Cow position:
               
chrX:2535011-2535123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
282-440
               

               
Cow position:
               
chrX:6013892-6014051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
282-446
               

               
Cow position:
               
chrX:15178378-15178543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
282-450
               

               
Cow position:
               
chrX:27495740-27495570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
282-453
               

               
Cow position:
               
chrX:21341451-21341278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
282-457
               

               
Cow position:
               
chrX:22618251-22618426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-465
               

               
Cow position:
               
chrX:24808546-24808731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
282-491
               

               
Cow position:
               
chrX:11148278-11148488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
282-494
               

               
Cow position:
               
chrX:1834870-1834662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
282-494
               

               
Cow position:
               
chrX:29949540-29949755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-495
               

               
Cow position:
               
chrX:6281696-6281911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
282-496
               

               
Cow position:
               
chrX:16276706-16276489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
282-496
               

               
Cow position:
               
chrX:26529033-26528818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chrX:674144-674360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 170
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chrX:14595903-14595691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chrX:17052601-17052385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 152
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chrX:23133026-23132809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chrX:28650492-28650711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:971838-971623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:2481574-2481790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:8610643-8610859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:12314694-12314914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:12668691-12668910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:16041130-16041355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:17612966-17613185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:18952622-18952841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:21491212-21491006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:21830588-21830370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:23040065-23040283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:23389460-23389676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:23454959-23455176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:26757556-26757774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:29097254-29097036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:29852510-29852723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chrX:30231039-30231256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-504
               

               
Cow position:
               
chrX:21059837-21059618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
282-504
               

               
Cow position:
               
chrX:30138519-30138742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
282-505
               

               
Cow position:
               
chrX:29286492-29286267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-505
               

               
Cow position:
               
chrX:29792973-29793198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
282-510
               

               
Cow position:
               
chrX:15486712-15486930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
282-510
               

               
Cow position:
               
chrX:29886048-29885817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
282-520
               

               
Cow position:
               
chrX:26766142-26766384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-521
               

               
Cow position:
               
chrX:27961914-27961681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
282-522
               

               
Cow position:
               
chrX:18553487-18553244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
282-523
               

               
Cow position:
               
chrX:1548037-1547799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-523
               

               
Cow position:
               
chrX:15591045-15590806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 219
               

               
Conread position:
               
282-523
               

               
Cow position:
               
chrX:28626573-28626811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
172, 44
               

               
Conread position:
               
282-525
               

               
Cow position:
               
chrX:44388817-44388581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
282-526
               

               
Cow position:
               
chrX:9093632-9093387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
282-526
               

               
Cow position:
               
chrX:31199621-31199374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
282-527
               

               
Cow position:
               
chrX:21590051-21589803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
283-440
               

               
Cow position:
               
chrX:26426525-26426681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
283-494
               

               
Cow position:
               
chrX:10745092-10745307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 193
               

               
Conread position:
               
283-497
               

               
Cow position:
               
chrX:14784406-14784623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
5, 102
               

               
Conread position:
               
283-497
               

               
Cow position:
               
chrX:28560833-28561047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
283-498
               

               
Cow position:
               
chrX:13416375-13416594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
283-498
               

               
Cow position:
               
chrX:19875571-19875354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
283-498
               

               
Cow position:
               
chrX:21580523-21580306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
284-482
               

               
Cow position:
               
chrX:8574437-8574635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
284-491
               

               
Cow position:
               
chrX:13182072-13182278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 74
               

               
Conread position:
               
284-494
               

               
Cow position:
               
chrX:29935653-29935441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
285-416
               

               
Cow position:
               
chrX:18452034-18451902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-438
               

               
Cow position:
               
chrX:7094457-7094303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
285-446
               

               
Cow position:
               
chrX:37813207-37813047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-450
               

               
Cow position:
               
chrX:15600216-15600050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
285-453
               

               
Cow position:
               
chrX:2815426-2815595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-453
               

               
Cow position:
               
chrX:13096204-13096373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-457
               

               
Cow position:
               
chrX:3084084-3084254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
285-457
               

               
Cow position:
               
chrX:3420157-3420328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
285-457
               

               
Cow position:
               
chrX:3467591-3467763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
285-457
               

               
Cow position:
               
chrX:35530908-35530736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-457
               

               
Cow position:
               
chrX:37850044-37849874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
285-466
               

               
Cow position:
               
chrX:12481050-12480866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-470
               

               
Cow position:
               
chrX:48367989-48368174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
285-483
               

               
Cow position:
               
chrX:18220481-18220278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
285-485
               

               
Cow position:
               
chrX:41887936-41888142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
285-491
               

               
Cow position:
               
chrX:6249417-6249630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
285-491
               

               
Cow position:
               
chrX:16362068-16362275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:979651-979440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:983719-983507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:2561804-2562015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:2858320-2858530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 183
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:3374853-3375062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 165
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:5335430-5335641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:5393950-5394161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:7482687-7482478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:7752955-7752745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:11422925-11422715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:12354290-12354080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:12702648-12702859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:13075641-13075852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:13397164-13397374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:15623447-15623656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:16811390-16811598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:17477369-17477580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:24324510-24324729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:28586035-28585824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:29172707-29172918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:30012054-30011843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:30201676-30201887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chrX:37015177-37014967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
285-495
               

               
Cow position:
               
chrX:6872015-6872227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
285-495
               

               
Cow position:
               
chrX:41850145-41850359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
285-496
               

               
Cow position:
               
chrX:9009394-9009183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
285-496
               

               
Cow position:
               
chrX:9126416-9126203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:2577481-2577267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:7031518-7031304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:8480706-8480492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:8589217-8589004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:18658739-18658949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:29910375-29910584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chrX:32066112-32066323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chrX:15126171-15126389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chrX:27986767-27986984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chrX:30068791-30069005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chrX:30365727-30365945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
285-505
               

               
Cow position:
               
chrX:17666728-17666951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
285-523
               

               
Cow position:
               
chrX:27619078-27619316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chrX:5864448-5864238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chrX:12287349-12287559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chrX:12653470-12653679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chrX:27425270-27425481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chrX:5322673-5322884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
286-498
               

               
Cow position:
               
chrX:21268984-21269215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
286-498
               

               
Cow position:
               
chrX:27316330-27316116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
286-498
               

               
Cow position:
               
chrX:27592933-27593147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
286-498
               

               
Cow position:
               
chrX:30182885-30183096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
286-509
               

               
Cow position:
               
chrX:13412079-13412303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
286-512
               

               
Cow position:
               
chrX:4752569-4752797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 220
               

               
Conread position:
               
286-521
               

               
Cow position:
               
chrX:12461866-12461637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
286-523
               

               
Cow position:
               
chrX:10416399-10416635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
286-523
               

               
Cow position:
               
chrX:22816902-22816677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
287-491
               

               
Cow position:
               
chrX:28868192-28868397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
287-494
               

               
Cow position:
               
chrX:15979905-15980114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
287-497
               

               
Cow position:
               
chrX:12343989-12343777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
287-497
               

               
Cow position:
               
chrX:18535506-18535293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
287-497
               

               
Cow position:
               
chrX:20798374-20798161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
287-497
               

               
Cow position:
               
chrX:29778459-29778667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chrX:38148648-38148437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
288-498
               

               
Cow position:
               
chrX:23278076-23277867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
288-509
               

               
Cow position:
               
chrX:36136505-36136723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
288-526
               

               
Cow position:
               
chrX:5296493-5296726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
289-494
               

               
Cow position:
               
chrX:14460575-14460368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chrX:16700370-16700159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
290-494
               

               
Cow position:
               
chrX:8962520-8962729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
290-498
               

               
Cow position:
               
chrX:30170785-30170990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
290-523
               

               
Cow position:
               
chrX:16015372-16015605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
294-451
               

               
Cow position:
               
chrX:24134213-24134371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
294-509
               

               
Cow position:
               
chrX:13054071-13053838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
295-475
               

               
Cow position:
               
chrX:6241559-6241741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
295-494
               

               
Cow position:
               
chrX:2011656-2011856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
295-506
               

               
Cow position:
               
chrX:4411691-4411482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
296-496
               

               
Cow position:
               
chrX:2103229-2103027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
299-498
               

               
Cow position:
               
chrX:34219352-34219151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
299-498
               

               
Cow position:
               
chrX:41102425-41102625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chrX:45377065-45377264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chrX:321501-321307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
307-497
               

               
Cow position:
               
chrX:39562900-39563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
314-513
               

               
Cow position:
               
chrX:22489170-22488968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
331-522
               

               
Cow position:
               
chrX:24476178-24476376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
336-455
               

               
Cow position:
               
chrX:22128910-22129029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
338-506
               

               
Cow position:
               
chrX:5305157-5304988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
349-509
               

               
Cow position:
               
chrX:23020314-23020153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
380-498
               

               
Cow position:
               
chrX:4797284-4797165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               
Show alignments to all cow chromosomes.