Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig2-55M18.5
        

               Conread position:
               278-638
               

               Cow position:
               chr11:53510672-53510299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               291-655
               

               Cow position:
               chr11:30210757-30211098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               328-515
               

               Cow position:
               chr11:47004224-47004416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               329-639
               

               Cow position:
               chr11:66188439-66188126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 199
               

               Conread position:
               332-557
               

               Cow position:
               chr11:69119179-69119402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               332-650
               

               Cow position:
               chr11:55744354-55744679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               340-617
               

               Cow position:
               chr11:22977976-22977707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               231, 59
               

               Conread position:
               342-643
               

               Cow position:
               chr11:23407359-23407661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               342-644
               

               Cow position:
               chr11:13592633-13592941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               205, 64
               

               Conread position:
               342-647
               

               Cow position:
               chr11:77745361-77745042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 265
               

               Conread position:
               343-650
               

               Cow position:
               chr11:13499914-13500218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               345-636
               

               Cow position:
               chr11:75285868-75285562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               345-637
               

               Cow position:
               chr11:15632657-15632364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 159
               

               Conread position:
               345-646
               

               Cow position:
               chr11:69977877-69978169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               204, 8
               

               Conread position:
               346-538
               

               Cow position:
               chr11:63687713-63687529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 5
               

               Conread position:
               349-541
               

               Cow position:
               chr11:32398540-32398729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               352-551
               

               Cow position:
               chr11:6202352-6202547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 44
               

               Conread position:
               353-557
               

               Cow position:
               chr11:38577865-38577669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               353-625
               

               Cow position:
               chr11:35580165-35580444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               353-625
               

               Cow position:
               chr11:82740415-82740675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               353-641
               

               Cow position:
               chr11:58588254-58588527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               263, 45
               

               Conread position:
               354-521
               

               Cow position:
               chr11:36329122-36328961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               354-548
               

               Cow position:
               chr11:7013835-7013647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               354-625
               

               Cow position:
               chr11:44031910-44032189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 251
               

               Conread position:
               355-635
               

               Cow position:
               chr11:80556130-80556413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               355-648
               

               Cow position:
               chr11:45742288-45742576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 43
               

               Conread position:
               356-545
               

               Cow position:
               chr11:34113174-34113363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               356-557
               

               Cow position:
               chr11:28643995-28644197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               356-557
               

               Cow position:
               chr11:82289485-82289688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               356-619
               

               Cow position:
               chr11:55761781-55762033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               213, 38
               

               Conread position:
               356-625
               

               Cow position:
               chr11:29659473-29659742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               183, 30
               

               Conread position:
               356-630
               

               Cow position:
               chr11:67600693-67600966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               214, 238
               

               Conread position:
               356-630
               

               Cow position:
               chr11:72884676-72884426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               191, 36
               

               Conread position:
               356-631
               

               Cow position:
               chr11:66041183-66041462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               356-632
               

               Cow position:
               chr11:9270815-9270548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               356-639
               

               Cow position:
               chr11:49148950-49149241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               356-641
               

               Cow position:
               chr11:27248403-27248687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 38
               

               Conread position:
               356-646
               

               Cow position:
               chr11:32254307-32254011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 47
               

               Conread position:
               357-468
               

               Cow position:
               chr11:16251335-16251223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               357-488
               

               Cow position:
               chr11:42793061-42792932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-515
               

               Cow position:
               chr11:49231785-49231941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               357-517
               

               Cow position:
               chr11:75965738-75965582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               357-522
               

               Cow position:
               chr11:52983588-52983750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-522
               

               Cow position:
               chr11:84490578-84490425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               357-531
               

               Cow position:
               chr11:66424969-66424796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               357-533
               

               Cow position:
               chr11:5377-5549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-534
               

               Cow position:
               chr11:8428422-8428598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               357-534
               

               Cow position:
               chr11:69652874-69652695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 117
               

               Conread position:
               357-535
               

               Cow position:
               chr11:64638617-64638438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               357-536
               

               Cow position:
               chr11:48496682-48496504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               357-537
               

               Cow position:
               chr11:249573-249392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               357-537
               

               Cow position:
               chr11:11558079-11558261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               357-541
               

               Cow position:
               chr11:50778285-50778461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               357-541
               

               Cow position:
               chr11:64406137-64406322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               357-542
               

               Cow position:
               chr11:377732-377547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               357-542
               

               Cow position:
               chr11:6194117-6194300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               357-542
               

               Cow position:
               chr11:22499452-22499272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               357-542
               

               Cow position:
               chr11:31506756-31506944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               357-542
               

               Cow position:
               chr11:65767109-65767294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               357-542
               

               Cow position:
               chr11:73512525-73512349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-545
               

               Cow position:
               chr11:261351-261170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-545
               

               Cow position:
               chr11:23128631-23128442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               357-546
               

               Cow position:
               chr11:8545101-8544919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               357-546
               

               Cow position:
               chr11:20602133-20602325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               357-546
               

               Cow position:
               chr11:25386976-25387167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               357-547
               

               Cow position:
               chr11:33345355-33345545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 68
               

               Conread position:
               357-547
               

               Cow position:
               chr11:35684583-35684401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-547
               

               Cow position:
               chr11:42359024-42359219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               357-547
               

               Cow position:
               chr11:43898051-43898238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-547
               

               Cow position:
               chr11:44234264-44234455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               357-547
               

               Cow position:
               chr11:69075820-69076010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               357-548
               

               Cow position:
               chr11:10213654-10213470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               357-548
               

               Cow position:
               chr11:11232543-11232357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               357-548
               

               Cow position:
               chr11:35926995-35926809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               357-551
               

               Cow position:
               chr11:6633617-6633814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               357-551
               

               Cow position:
               chr11:14466577-14466383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               357-551
               

               Cow position:
               chr11:33310884-33311081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               357-551
               

               Cow position:
               chr11:47772481-47772286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               357-551
               

               Cow position:
               chr11:59872843-59873031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 42
               

               Conread position:
               357-553
               

               Cow position:
               chr11:5201734-5201547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               357-553
               

               Cow position:
               chr11:83230485-83230295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               357-554
               

               Cow position:
               chr11:4653066-4652866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               357-554
               

               Cow position:
               chr11:30954911-30955107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               357-554
               

               Cow position:
               chr11:43430545-43430348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               357-554
               

               Cow position:
               chr11:44575832-44575646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               357-554
               

               Cow position:
               chr11:61958833-61958636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               357-554
               

               Cow position:
               chr11:84385724-84385532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-556
               

               Cow position:
               chr11:5031862-5031668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-556
               

               Cow position:
               chr11:64351883-64351682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:16907132-16906941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:17831309-17831113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:40573421-40573226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:41293906-41293708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:44036635-44036831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               357-557
               

               Cow position:
               chr11:48272109-48272310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:63847760-63847954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               357-557
               

               Cow position:
               chr11:72375774-72375566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               357-558
               

               Cow position:
               chr11:21497433-21497633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               357-558
               

               Cow position:
               chr11:32436243-32436443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               357-558
               

               Cow position:
               chr11:48474615-48474814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               357-558
               

               Cow position:
               chr11:59702396-59702602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               357-558
               

               Cow position:
               chr11:70836467-70836266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               357-559
               

               Cow position:
               chr11:36238695-36238889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               357-559
               

               Cow position:
               chr11:47545042-47545248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               357-562
               

               Cow position:
               chr11:36658909-36658709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               357-565
               

               Cow position:
               chr11:40478938-40478736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               357-570
               

               Cow position:
               chr11:63435429-63435643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               357-573
               

               Cow position:
               chr11:7590105-7590312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-574
               

               Cow position:
               chr11:70086240-70086463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 75
               

               Conread position:
               357-587
               

               Cow position:
               chr11:3393300-3393066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               357-587
               

               Cow position:
               chr11:71868694-71868455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               357-589
               

               Cow position:
               chr11:44636846-44636612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               48, 183
               

               Conread position:
               357-591
               

               Cow position:
               chr11:24599478-24599243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               37, 140
               

               Conread position:
               357-591
               

               Cow position:
               chr11:30370019-30370254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               357-602
               

               Cow position:
               chr11:56654461-56654712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 193
               

               Conread position:
               357-613
               

               Cow position:
               chr11:28993820-28993577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               213, 49
               

               Conread position:
               357-613
               

               Cow position:
               chr11:42296706-42296456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               357-617
               

               Cow position:
               chr11:13043234-13042973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               203, 34
               

               Conread position:
               357-619
               

               Cow position:
               chr11:43360871-43360610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               357-620
               

               Cow position:
               chr11:21852393-21852138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               357-620
               

               Cow position:
               chr11:63434144-63433888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               179, 34
               

               Conread position:
               357-620
               

               Cow position:
               chr11:80564204-80564475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               191, 37
               

               Conread position:
               357-621
               

               Cow position:
               chr11:51729199-51729453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-622
               

               Cow position:
               chr11:81135255-81134989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               357-624
               

               Cow position:
               chr11:15285705-15285442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               357-625
               

               Cow position:
               chr11:2917674-2917410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 37
               

               Conread position:
               357-625
               

               Cow position:
               chr11:6233968-6233695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               190, 45
               

               Conread position:
               357-625
               

               Cow position:
               chr11:39115405-39115656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               357-625
               

               Cow position:
               chr11:41986132-41985865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               192, 42
               

               Conread position:
               357-625
               

               Cow position:
               chr11:46580267-46580531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               155, 141
               

               Conread position:
               357-625
               

               Cow position:
               chr11:65157499-65157222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               97, 247
               

               Conread position:
               357-625
               

               Cow position:
               chr11:65762688-65762402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               357-625
               

               Cow position:
               chr11:67615335-67615069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               357-625
               

               Cow position:
               chr11:68905163-68904905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-625
               

               Cow position:
               chr11:70250830-70251097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 45
               

               Conread position:
               357-625
               

               Cow position:
               chr11:70978819-70978552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               186, 43
               

               Conread position:
               357-625
               

               Cow position:
               chr11:83032593-83032860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               357-630
               

               Cow position:
               chr11:63999178-63998903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 80
               

               Conread position:
               357-631
               

               Cow position:
               chr11:30708416-30708694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 140
               

               Conread position:
               357-632
               

               Cow position:
               chr11:17036618-17036342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               357-632
               

               Cow position:
               chr11:17676459-17676184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               203, 41
               

               Conread position:
               357-632
               

               Cow position:
               chr11:37804644-37804361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               190, 254
               

               Conread position:
               357-633
               

               Cow position:
               chr11:375366-375651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 127
               

               Conread position:
               357-633
               

               Cow position:
               chr11:19946347-19946612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               357-633
               

               Cow position:
               chr11:49152863-49153131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               357-634
               

               Cow position:
               chr11:1067531-1067246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               357-634
               

               Cow position:
               chr11:7385349-7385626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               357-634
               

               Cow position:
               chr11:12111542-12111283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               265, 41
               

               Conread position:
               357-634
               

               Cow position:
               chr11:15338977-15339248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               191, 18
               

               Conread position:
               357-634
               

               Cow position:
               chr11:27719411-27719147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               357-634
               

               Cow position:
               chr11:41603778-41603510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               357-634
               

               Cow position:
               chr11:77705667-77705942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               357-635
               

               Cow position:
               chr11:35213255-35212978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               202, 12
               

               Conread position:
               357-635
               

               Cow position:
               chr11:56187529-56187804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               357-635
               

               Cow position:
               chr11:67615017-67614732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 187
               

               Conread position:
               357-636
               

               Cow position:
               chr11:26144184-26143904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               190, 14
               

               Conread position:
               357-636
               

               Cow position:
               chr11:30493910-30494182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               203, 37
               

               Conread position:
               357-636
               

               Cow position:
               chr11:62789040-62789320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 240
               

               Conread position:
               357-636
               

               Cow position:
               chr11:64044153-64044411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-636
               

               Cow position:
               chr11:71492943-71492670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               357-637
               

               Cow position:
               chr11:6194319-6194584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               213, 43
               

               Conread position:
               357-638
               

               Cow position:
               chr11:29960207-29960488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               357-638
               

               Cow position:
               chr11:42083384-42083649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-638
               

               Cow position:
               chr11:83043452-83043173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               357-639
               

               Cow position:
               chr11:27405160-27404874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               182, 111
               

               Conread position:
               357-639
               

               Cow position:
               chr11:48659843-48660127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 236
               

               Conread position:
               357-640
               

               Cow position:
               chr11:2925378-2925107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               213, 32
               

               Conread position:
               357-640
               

               Cow position:
               chr11:19592079-19591798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               357-640
               

               Cow position:
               chr11:20238583-20238873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               357-640
               

               Cow position:
               chr11:33824979-33824717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               357-640
               

               Cow position:
               chr11:49057314-49057579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               213, 46
               

               Conread position:
               357-640
               

               Cow position:
               chr11:79728757-79728474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               357-641
               

               Cow position:
               chr11:2084053-2084346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               190, 245
               

               Conread position:
               357-641
               

               Cow position:
               chr11:18698789-18699070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               357-641
               

               Cow position:
               chr11:35536499-35536775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               357-641
               

               Cow position:
               chr11:39060689-39060406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               357-641
               

               Cow position:
               chr11:45631850-45631583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               357-642
               

               Cow position:
               chr11:15772803-15772513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               357-642
               

               Cow position:
               chr11:33348272-33347999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               357-642
               

               Cow position:
               chr11:45646683-45646387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               357-642
               

               Cow position:
               chr11:53773589-53773883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 162
               

               Conread position:
               357-642
               

               Cow position:
               chr11:78381148-78380868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               357-643
               

               Cow position:
               chr11:48295942-48296225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               357-643
               

               Cow position:
               chr11:62239656-62239942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               208, 10
               

               Conread position:
               357-643
               

               Cow position:
               chr11:62490344-62490621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 160
               

               Conread position:
               357-643
               

               Cow position:
               chr11:75874840-75874571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               357-644
               

               Cow position:
               chr11:11125574-11125863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               357-644
               

               Cow position:
               chr11:15467376-15467648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               357-645
               

               Cow position:
               chr11:13940104-13940392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               180, 41
               

               Conread position:
               357-645
               

               Cow position:
               chr11:35153913-35153616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               172, 46
               

               Conread position:
               357-646
               

               Cow position:
               chr11:40818726-40818427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               357-647
               

               Cow position:
               chr11:30192086-30192381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               357-647
               

               Cow position:
               chr11:36194208-36194499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               357-647
               

               Cow position:
               chr11:52690610-52690318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               190, 113
               

               Conread position:
               357-647
               

               Cow position:
               chr11:55052792-55053071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               199, 18
               

               Conread position:
               357-647
               

               Cow position:
               chr11:71390652-71390369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 138
               

               Conread position:
               357-648
               

               Cow position:
               chr11:2907607-2907322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               357-648
               

               Cow position:
               chr11:16314784-16315081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               357-648
               

               Cow position:
               chr11:36182601-36182898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               357-648
               

               Cow position:
               chr11:39462533-39462825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               203, 239
               

               Conread position:
               357-648
               

               Cow position:
               chr11:66572589-66572284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               357-648
               

               Cow position:
               chr11:70206233-70206524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               214, 34
               

               Conread position:
               357-648
               

               Cow position:
               chr11:83925962-83926236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               243, 41
               

               Conread position:
               357-649
               

               Cow position:
               chr11:14470282-14470567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               192, 22
               

               Conread position:
               357-649
               

               Cow position:
               chr11:44222793-44223089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               357-650
               

               Cow position:
               chr11:2575992-2575698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               357-653
               

               Cow position:
               chr11:42066770-42067074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 67
               

               Conread position:
               357-654
               

               Cow position:
               chr11:46746543-46746849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               357-664
               

               Cow position:
               chr11:70756393-70756693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               183, 52
               

               Conread position:
               358-497
               

               Cow position:
               chr11:30596900-30597043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               358-514
               

               Cow position:
               chr11:24937576-24937732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               358-515
               

               Cow position:
               chr11:11045121-11044965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               358-537
               

               Cow position:
               chr11:33341234-33341055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               358-542
               

               Cow position:
               chr11:19586367-19586554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               358-545
               

               Cow position:
               chr11:13075887-13075714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               358-547
               

               Cow position:
               chr11:20761759-20761942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               358-550
               

               Cow position:
               chr11:76606588-76606775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               358-553
               

               Cow position:
               chr11:71341553-71341359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               358-554
               

               Cow position:
               chr11:1849259-1849066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               180, 33
               

               Conread position:
               358-554
               

               Cow position:
               chr11:2092246-2092434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               41, 88
               

               Conread position:
               358-557
               

               Cow position:
               chr11:952180-952376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               358-557
               

               Cow position:
               chr11:73924649-73924451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               358-591
               

               Cow position:
               chr11:80537398-80537624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 128
               

               Conread position:
               358-621
               

               Cow position:
               chr11:21844220-21843960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               358-625
               

               Cow position:
               chr11:74316625-74316889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               180, 33
               

               Conread position:
               358-625
               

               Cow position:
               chr11:82940709-82940447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               358-632
               

               Cow position:
               chr11:40608684-40608404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               358-634
               

               Cow position:
               chr11:42160148-42159871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               358-635
               

               Cow position:
               chr11:52297308-52297028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 66
               

               Conread position:
               358-638
               

               Cow position:
               chr11:80923411-80923123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               358-642
               

               Cow position:
               chr11:8437777-8437484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               181, 57
               

               Conread position:
               358-646
               

               Cow position:
               chr11:30830703-30830420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 239
               

               Conread position:
               358-648
               

               Cow position:
               chr11:1625311-1625015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               359-520
               

               Cow position:
               chr11:70619955-70620117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               359-542
               

               Cow position:
               chr11:42044080-42043902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               70, 66
               

               Conread position:
               359-550
               

               Cow position:
               chr11:32691051-32690868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               359-551
               

               Cow position:
               chr11:34121108-34121302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               49, 167
               

               Conread position:
               359-553
               

               Cow position:
               chr11:67747198-67747385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               359-556
               

               Cow position:
               chr11:23138145-23137942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               359-557
               

               Cow position:
               chr11:1071179-1070979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               359-557
               

               Cow position:
               chr11:62225896-62226095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               359-557
               

               Cow position:
               chr11:83033323-83033130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               359-558
               

               Cow position:
               chr11:35803047-35803247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               359-590
               

               Cow position:
               chr11:68206929-68206695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 20
               

               Conread position:
               359-591
               

               Cow position:
               chr11:39499267-39499507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               359-592
               

               Cow position:
               chr11:49934823-49934590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               359-619
               

               Cow position:
               chr11:17083397-17083136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               359-620
               

               Cow position:
               chr11:65607777-65607513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               359-621
               

               Cow position:
               chr11:21728361-21728110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               359-624
               

               Cow position:
               chr11:33409347-33409084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 34
               

               Conread position:
               359-629
               

               Cow position:
               chr11:53778529-53778807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               184, 41
               

               Conread position:
               359-631
               

               Cow position:
               chr11:49872973-49872698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 109
               

               Conread position:
               359-644
               

               Cow position:
               chr11:48085829-48086119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 238
               

               Conread position:
               359-648
               

               Cow position:
               chr11:34646501-34646802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 247
               

               Conread position:
               359-649
               

               Cow position:
               chr11:62620293-62620583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 18
               

               Conread position:
               359-650
               

               Cow position:
               chr11:34962978-34963280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 115
               

               Conread position:
               360-516
               

               Cow position:
               chr11:10620416-10620259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               360-535
               

               Cow position:
               chr11:81162520-81162345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-554
               

               Cow position:
               chr11:29699782-29699590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               360-584
               

               Cow position:
               chr11:27565250-27565465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               180, 40
               

               Conread position:
               360-619
               

               Cow position:
               chr11:18910964-18910706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               179, 97
               

               Conread position:
               360-621
               

               Cow position:
               chr11:48544346-48544615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               97, 178
               

               Conread position:
               360-622
               

               Cow position:
               chr11:45434995-45435255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               360-625
               

               Cow position:
               chr11:84890806-84890544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               360-634
               

               Cow position:
               chr11:13061321-13061063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               360-634
               

               Cow position:
               chr11:52380959-52380681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               360-635
               

               Cow position:
               chr11:47724817-47725082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               360-647
               

               Cow position:
               chr11:64334766-64335035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               361-556
               

               Cow position:
               chr11:80530284-80530467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               361-558
               

               Cow position:
               chr11:22747414-22747220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 64
               

               Conread position:
               361-613
               

               Cow position:
               chr11:8525195-8524947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               188, 39
               

               Conread position:
               361-634
               

               Cow position:
               chr11:38334440-38334713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               361-648
               

               Cow position:
               chr11:50937832-50937551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               362-490
               

               Cow position:
               chr11:1779413-1779286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               362-516
               

               Cow position:
               chr11:67550457-67550309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               362-543
               

               Cow position:
               chr11:53279798-53279619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               362-621
               

               Cow position:
               chr11:41313740-41313483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               177, 38
               

               Conread position:
               362-625
               

               Cow position:
               chr11:23272086-23271823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               174, 51
               

               Conread position:
               362-636
               

               Cow position:
               chr11:46747947-46747665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               362-661
               

               Cow position:
               chr11:25620483-25620170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 246
               

               Conread position:
               363-505
               

               Cow position:
               chr11:54218634-54218772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               363-518
               

               Cow position:
               chr11:69392479-69392633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               363-519
               

               Cow position:
               chr11:82796369-82796217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               363-557
               

               Cow position:
               chr11:23586553-23586748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               363-557
               

               Cow position:
               chr11:26845677-26845485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               363-613
               

               Cow position:
               chr11:77319330-77319583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               363-625
               

               Cow position:
               chr11:50152898-50152630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 65
               

               Conread position:
               363-625
               

               Cow position:
               chr11:62813034-62812769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               363-625
               

               Cow position:
               chr11:68913060-68913326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               363-632
               

               Cow position:
               chr11:55494595-55494854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               363-634
               

               Cow position:
               chr11:259255-258983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               363-635
               

               Cow position:
               chr11:46922981-46922694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 244
               

               Conread position:
               363-636
               

               Cow position:
               chr11:27746843-27747113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 27
               

               Conread position:
               363-643
               

               Cow position:
               chr11:17493394-17493671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               118, 159
               

               Conread position:
               363-647
               

               Cow position:
               chr11:63866737-63866458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               153, 27
               

               Conread position:
               364-515
               

               Cow position:
               chr11:36914802-36914659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               364-635
               

               Cow position:
               chr11:63469793-63470051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               250, 27
               

               Conread position:
               364-641
               

               Cow position:
               chr11:16342312-16342049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               365-537
               

               Cow position:
               chr11:28168505-28168333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               365-547
               

               Cow position:
               chr11:17661012-17661183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               365-558
               

               Cow position:
               chr11:79019140-79018948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               365-621
               

               Cow position:
               chr11:17721885-17721622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 237
               

               Conread position:
               365-621
               

               Cow position:
               chr11:67312690-67312964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               365-636
               

               Cow position:
               chr11:41094-41364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               365-641
               

               Cow position:
               chr11:30354977-30355243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               366-592
               

               Cow position:
               chr11:31410963-31410727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               367-643
               

               Cow position:
               chr11:18785950-18785695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               38, 93
               

               Conread position:
               367-646
               

               Cow position:
               chr11:40395359-40395640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               368-538
               

               Cow position:
               chr11:35874082-35873912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-633
               

               Cow position:
               chr11:38236174-38236436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               181, 32
               

               Conread position:
               369-619
               

               Cow position:
               chr11:4637250-4636998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               369-632
               

               Cow position:
               chr11:30867104-30867366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 193
               

               Conread position:
               372-633
               

               Cow position:
               chr11:64048332-64048581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               373-655
               

               Cow position:
               chr11:20194502-20194213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               374-534
               

               Cow position:
               chr11:30483845-30484006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               375-540
               

               Cow position:
               chr11:3790764-3790935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               375-557
               

               Cow position:
               chr11:62150963-62150784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               376-537
               

               Cow position:
               chr11:10363458-10363297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 142
               

               Conread position:
               376-557
               

               Cow position:
               chr11:48248286-48248104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               378-640
               

               Cow position:
               chr11:47837251-47837518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               178, 64
               

               Conread position:
               379-557
               

               Cow position:
               chr11:49255338-49255508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               382-631
               

               Cow position:
               chr11:25119997-25119748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               382-636
               

               Cow position:
               chr11:15016993-15017252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               156, 39
               

               Conread position:
               383-647
               

               Cow position:
               chr11:65826814-65826546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               176, 22
               

               Conread position:
               384-640
               

               Cow position:
               chr11:70483913-70483652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               162, 19
               

               Conread position:
               385-625
               

               Cow position:
               chr11:64104937-64105176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               137, 42
               

               Conread position:
               386-557
               

               Cow position:
               chr11:72292492-72292662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               386-620
               

               Cow position:
               chr11:24601903-24602141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               113, 159
               

               Conread position:
               387-630
               

               Cow position:
               chr11:30964286-30964530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               130, 41
               

               Conread position:
               387-641
               

               Cow position:
               chr11:18851849-18852097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               155, 12
               

               Conread position:
               388-547
               

               Cow position:
               chr11:30925097-30925254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               388-625
               

               Cow position:
               chr11:1932552-1932305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 217
               

               Conread position:
               389-649
               

               Cow position:
               chr11:17889789-17889522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               390-672
               

               Cow position:
               chr11:30475941-30476226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               391-547
               

               Cow position:
               chr11:64090154-64089998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               391-556
               

               Cow position:
               chr11:62609548-62609713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               392-535
               

               Cow position:
               chr11:35246365-35246509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               392-535
               

               Cow position:
               chr11:36986896-36987037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               392-548
               

               Cow position:
               chr11:76114592-76114743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               392-551
               

               Cow position:
               chr11:3282974-3283127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               392-572
               

               Cow position:
               chr11:54334274-54334455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               392-611
               

               Cow position:
               chr11:39855069-39854853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               167, 67
               

               Conread position:
               392-620
               

               Cow position:
               chr11:8988286-8988052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               392-621
               

               Cow position:
               chr11:63920109-63919888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               392-643
               

               Cow position:
               chr11:36112367-36112609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               393-550
               

               Cow position:
               chr11:1362522-1362365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               393-551
               

               Cow position:
               chr11:44016918-44017078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               393-613
               

               Cow position:
               chr11:73354114-73353896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               394-625
               

               Cow position:
               chr11:20205905-20205675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               176, 200
               

               Conread position:
               394-635
               

               Cow position:
               chr11:80639603-80639359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 192
               

               Conread position:
               394-653
               

               Cow position:
               chr11:62663285-62663028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               176, 75
               

               Conread position:
               395-546
               

               Cow position:
               chr11:4430185-4430038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               395-547
               

               Cow position:
               chr11:34413392-34413240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-580
               

               Cow position:
               chr11:11523519-11523326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               396-538
               

               Cow position:
               chr11:53553168-53553306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               396-557
               

               Cow position:
               chr11:4207260-4207418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               396-626
               

               Cow position:
               chr11:29946965-29946737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               177, 152
               

               Conread position:
               396-643
               

               Cow position:
               chr11:81762811-81763070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               398-648
               

               Cow position:
               chr11:77013735-77013976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               400-556
               

               Cow position:
               chr11:47882757-47882913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               400-591
               

               Cow position:
               chr11:27449658-27449480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               400-625
               

               Cow position:
               chr11:83323516-83323760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 214
               

               Conread position:
               400-643
               

               Cow position:
               chr11:68883671-68883921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               400-649
               

               Cow position:
               chr11:78820107-78820358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               147, 20
               

               Conread position:
               401-634
               

               Cow position:
               chr11:10992221-10992450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               402-557
               

               Cow position:
               chr11:56290466-56290621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-612
               

               Cow position:
               chr11:33289500-33289299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               402-623
               

               Cow position:
               chr11:37425187-37424966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               402-644
               

               Cow position:
               chr11:897628-897865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 191
               

               Conread position:
               402-648
               

               Cow position:
               chr11:17278717-17278477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               197, 67
               

               Conread position:
               402-648
               

               Cow position:
               chr11:62742687-62742441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               158, 8
               

               Conread position:
               403-534
               

               Cow position:
               chr11:31352596-31352465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-534
               

               Cow position:
               chr11:50072893-50073024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-542
               

               Cow position:
               chr11:18587640-18587501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-547
               

               Cow position:
               chr11:29786544-29786398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               403-553
               

               Cow position:
               chr11:17321603-17321754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 81
               

               Conread position:
               403-553
               

               Cow position:
               chr11:62376517-62376368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               403-554
               

               Cow position:
               chr11:19606533-19606685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               403-588
               

               Cow position:
               chr11:16843028-16842851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               138, 111
               

               Conread position:
               403-591
               

               Cow position:
               chr11:62889938-62889740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               403-622
               

               Cow position:
               chr11:19247243-19247025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               136, 62
               

               Conread position:
               403-624
               

               Cow position:
               chr11:39249928-39250146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               144, 106
               

               Conread position:
               403-625
               

               Cow position:
               chr11:18447536-18447318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 159
               

               Conread position:
               403-630
               

               Cow position:
               chr11:47899224-47899437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               403-631
               

               Cow position:
               chr11:15382547-15382306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               127, 205
               

               Conread position:
               403-636
               

               Cow position:
               chr11:27462142-27461917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               403-636
               

               Cow position:
               chr11:30638994-30638758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               157, 197
               

               Conread position:
               403-636
               

               Cow position:
               chr11:38211601-38211835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               148, 194
               

               Conread position:
               403-646
               

               Cow position:
               chr11:31227918-31228157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               153, 178
               

               Conread position:
               403-648
               

               Cow position:
               chr11:27913240-27913493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               403-649
               

               Cow position:
               chr11:4225053-4225298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               150, 66
               

               Conread position:
               403-653
               

               Cow position:
               chr11:30172265-30172510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               403-655
               

               Cow position:
               chr11:18914981-18915224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 125
               

               Conread position:
               404-551
               

               Cow position:
               chr11:81931155-81931013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               404-554
               

               Cow position:
               chr11:82731041-82730891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               404-585
               

               Cow position:
               chr11:84977402-84977219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 156
               

               Conread position:
               404-591
               

               Cow position:
               chr11:11469691-11469501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               404-629
               

               Cow position:
               chr11:80820046-80819838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               404-634
               

               Cow position:
               chr11:43914250-43914484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               145, 17
               

               Conread position:
               404-645
               

               Cow position:
               chr11:28078460-28078693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               149, 55
               

               Conread position:
               405-536
               

               Cow position:
               chr11:76822128-76822000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               405-545
               

               Cow position:
               chr11:57491522-57491386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               405-551
               

               Cow position:
               chr11:15373796-15373943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 105
               

               Conread position:
               405-558
               

               Cow position:
               chr11:3234033-3234186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-613
               

               Cow position:
               chr11:34467529-34467733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               405-640
               

               Cow position:
               chr11:35669994-35669768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               194, 99
               

               Conread position:
               405-643
               

               Cow position:
               chr11:16801994-16801777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               406-557
               

               Cow position:
               chr11:63909705-63909557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               406-632
               

               Cow position:
               chr11:21885792-21886020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               406-634
               

               Cow position:
               chr11:17227683-17227458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               407-554
               

               Cow position:
               chr11:84775035-84775180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               407-621
               

               Cow position:
               chr11:11533968-11533756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               410-542
               

               Cow position:
               chr11:3248746-3248612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               410-641
               

               Cow position:
               chr11:30895040-30894804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               413-552
               

               Cow position:
               chr11:81728681-81728544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               413-557
               

               Cow position:
               chr11:53717841-53717696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               413-557
               

               Cow position:
               chr11:58173591-58173734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               413-577
               

               Cow position:
               chr11:58938779-58938617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               414-583
               

               Cow position:
               chr11:31885690-31885858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               414-625
               

               Cow position:
               chr11:46427441-46427224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 133
               

               Conread position:
               414-630
               

               Cow position:
               chr11:3896732-3896511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               414-647
               

               Cow position:
               chr11:66939626-66939387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               415-577
               

               Cow position:
               chr11:65803903-65803741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 146
               

               Conread position:
               417-630
               

               Cow position:
               chr11:71021970-71022189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               122, 188
               

               Conread position:
               418-559
               

               Cow position:
               chr11:17638564-17638423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-538
               

               Cow position:
               chr11:2900746-2900630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               421-625
               

               Cow position:
               chr11:51196108-51195914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               423-542
               

               Cow position:
               chr11:8107420-8107538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               425-654
               

               Cow position:
               chr11:56114916-56115147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 171
               

               Conread position:
               426-638
               

               Cow position:
               chr11:2484817-2484600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               427-625
               

               Cow position:
               chr11:30986621-30986819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               427-625
               

               Cow position:
               chr11:63165667-63165468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               132, 169
               

               Conread position:
               428-591
               

               Cow position:
               chr11:84764017-84764174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               428-601
               

               Cow position:
               chr11:9698883-9699052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               428-625
               

               Cow position:
               chr11:58185865-58186055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               429-625
               

               Cow position:
               chr11:905401-905200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 105
               

               Conread position:
               429-636
               

               Cow position:
               chr11:63382209-63382004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               141, 162
               

               Conread position:
               430-643
               

               Cow position:
               chr11:48315414-48315198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               129, 168
               

               Conread position:
               430-646
               

               Cow position:
               chr11:3175656-3175871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               136, 129
               

               Conread position:
               431-647
               

               Cow position:
               chr11:63478361-63478570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               196, 50
               

               Conread position:
               431-648
               

               Cow position:
               chr11:87172093-87171868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 170
               

               Conread position:
               432-636
               

               Cow position:
               chr11:15607987-15607795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               432-643
               

               Cow position:
               chr11:15366988-15366778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 174
               

               Conread position:
               432-643
               

               Cow position:
               chr11:41576883-41576673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               432-645
               

               Cow position:
               chr11:9699260-9699052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               432-647
               

               Cow position:
               chr11:19577926-19578137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               434-554
               

               Cow position:
               chr11:70741129-70741249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               434-625
               

               Cow position:
               chr11:67948755-67948574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               136, 105
               

               Conread position:
               434-636
               

               Cow position:
               chr11:48900858-48900665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               435-557
               

               Cow position:
               chr11:41983179-41983056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               435-625
               

               Cow position:
               chr11:86895364-86895555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 127
               

               Conread position:
               435-640
               

               Cow position:
               chr11:49396538-49396326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 165
               

               Conread position:
               438-548
               

               Cow position:
               chr11:34238580-34238470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               438-624
               

               Cow position:
               chr11:21830219-21830029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 161
               

               Conread position:
               438-633
               

               Cow position:
               chr11:1485236-1485042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               438-634
               

               Cow position:
               chr11:46784465-46784655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               132, 38
               

               Conread position:
               439-633
               

               Cow position:
               chr11:22884405-22884597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               131, 27
               

               Conread position:
               439-653
               

               Cow position:
               chr11:19579024-19578813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 78
               

               Conread position:
               440-646
               

               Cow position:
               chr11:49210829-49210612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               441-621
               

               Cow position:
               chr11:63484932-63485111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 6
               

               Conread position:
               441-625
               

               Cow position:
               chr11:25320179-25320347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               441-640
               

               Cow position:
               chr11:80586268-80586463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 103
               

               Conread position:
               441-654
               

               Cow position:
               chr11:7571618-7571833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 125
               

               Conread position:
               443-650
               

               Cow position:
               chr11:77241699-77241912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               444-631
               

               Cow position:
               chr11:42206418-42206604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               116, 155
               

               Conread position:
               446-625
               

               Cow position:
               chr11:30322494-30322311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 153
               

               Conread position:
               446-646
               

               Cow position:
               chr11:46499009-46499195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               447-557
               

               Cow position:
               chr11:31326006-31326118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               448-640
               

               Cow position:
               chr11:25721993-25721807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               449-557
               

               Cow position:
               chr11:35860584-35860690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               450-625
               

               Cow position:
               chr11:38223786-38223610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               453-644
               

               Cow position:
               chr11:62483955-62483770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               178, 13
               

               Conread position:
               453-648
               

               Cow position:
               chr11:4621424-4621226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               456-630
               

               Cow position:
               chr11:71814715-71814889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 140
               

               Conread position:
               456-630
               

               Cow position:
               chr11:80296844-80296671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 142
               

               Conread position:
               457-640
               

               Cow position:
               chr11:13684701-13684523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 82
               

               Conread position:
               457-641
               

               Cow position:
               chr11:15591466-15591281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               459-639
               

               Cow position:
               chr11:37041983-37042171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 144
               

               Conread position:
               460-623
               

               Cow position:
               chr11:53487141-53486979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               110, 66
               

               Conread position:
               461-628
               

               Cow position:
               chr11:54872746-54872574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               462-635
               

               Cow position:
               chr11:4411854-4411679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 139
               

               Conread position:
               462-636
               

               Cow position:
               chr11:74839625-74839797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 135
               

               Conread position:
               462-640
               

               Cow position:
               chr11:53651655-53651840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 143
               

               Conread position:
               463-652
               

               Cow position:
               chr11:75915009-75915193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 76
               

               Conread position:
               466-625
               

               Cow position:
               chr11:63483961-63484123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 132
               

               Conread position:
               468-630
               

               Cow position:
               chr11:81928487-81928324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               470-636
               

               Cow position:
               chr11:83249425-83249589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 125
               

               Conread position:
               470-640
               

               Cow position:
               chr11:30857060-30857233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               470-648
               

               Cow position:
               chr11:8422095-8421919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               470-649
               

               Cow position:
               chr11:68570358-68570174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               472-648
               

               Cow position:
               chr11:36104337-36104512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               476-654
               

               Cow position:
               chr11:4653226-4653049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 120
               

               Conread position:
               477-636
               

               Cow position:
               chr11:17369560-17369720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 119
               

               Conread position:
               477-638
               

               Cow position:
               chr11:81340511-81340344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 120
               

               Conread position:
               478-648
               

               Cow position:
               chr11:65431549-65431723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               479-632
               

               Cow position:
               chr11:57170567-57170419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               487-643
               

               Cow position:
               chr11:4602192-4602351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 107
               

               Conread position:
               492-642
               

               Cow position:
               chr11:32587079-32586927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               512-641
               

               Cow position:
               chr11:80823974-80824102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 84
               
Show alignments to all cow chromosomes.
Conread position:	278-638
Cow position:	chr11:53510672-53510299 (view UCSC Genome Browser custom track)
Alignm length:	379
Alignm identity:	239
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	14, 25
Conread position:	291-655
Cow position:	chr11:30210757-30211098 (view UCSC Genome Browser custom track)
Alignm length:	368
Alignm identity:	238
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	26, 18
Conread position:	328-515
Cow position:	chr11:47004224-47004416 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	137
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	42, 110
Conread position:	329-639
Cow position:	chr11:66188439-66188126 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	218
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	76, 199
Conread position:	332-557
Cow position:	chr11:69119179-69119402 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	176
Alignm E-value:	0
Alignm gaps (pig, cow):	25, 0
Conread position:	332-650
Cow position:	chr11:55744354-55744679 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	224
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	19, 59
Conread position:	340-617
Cow position:	chr11:22977976-22977707 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	188
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	231, 59
Conread position:	342-643
Cow position:	chr11:23407359-23407661 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	220
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 15
Conread position:	342-644
Cow position:	chr11:13592633-13592941 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	211
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	205, 64
Conread position:	342-647
Cow position:	chr11:77745361-77745042 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	212
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	12, 265
Conread position:	343-650
Cow position:	chr11:13499914-13500218 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	209
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	15, 10
Conread position:	345-636
Cow position:	chr11:75285868-75285562 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	211
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	50, 59
Conread position:	345-637
Cow position:	chr11:15632657-15632364 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	199
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	9, 159
Conread position:	345-646
Cow position:	chr11:69977877-69978169 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	215
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	204, 8
Conread position:	346-538
Cow position:	chr11:63687713-63687529 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	147
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	77, 5
Conread position:	349-541
Cow position:	chr11:32398540-32398729 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	139
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	118, 0
Conread position:	352-551
Cow position:	chr11:6202352-6202547 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	142
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	5, 44
Conread position:	353-557
Cow position:	chr11:38577865-38577669 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	141
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	47, 0
Conread position:	353-625
Cow position:	chr11:35580165-35580444 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	202
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	37, 53
Conread position:	353-641
Cow position:	chr11:58588254-58588527 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	193
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	263, 45