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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-55M18.5
        

               
Conread position:
               
302-642
               

               
Cow position:
               
chr16:33134816-33135147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
332-636
               

               
Cow position:
               
chr16:30305908-30305606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
338-557
               

               
Cow position:
               
chr16:7980701-7980918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
338-557
               

               
Cow position:
               
chr16:51610925-51610706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
340-643
               

               
Cow position:
               
chr16:11135068-11134767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 14
               

               
Conread position:
               
342-563
               

               
Cow position:
               
chr16:48370038-48369818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
342-625
               

               
Cow position:
               
chr16:44584520-44584243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
344-541
               

               
Cow position:
               
chr16:42240964-42241159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
348-643
               

               
Cow position:
               
chr16:56243965-56243663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
212, 55
               

               
Conread position:
               
349-591
               

               
Cow position:
               
chr16:10504752-10504986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
349-621
               

               
Cow position:
               
chr16:42444079-42444356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
349-643
               

               
Cow position:
               
chr16:50688443-50688725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr16:496454-496248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
352-550
               

               
Cow position:
               
chr16:23730003-23729796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
352-580
               

               
Cow position:
               
chr16:54679592-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
353-551
               

               
Cow position:
               
chr16:34754036-34753838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
353-556
               

               
Cow position:
               
chr16:52133588-52133389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
353-625
               

               
Cow position:
               
chr16:25839543-25839811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
353-631
               

               
Cow position:
               
chr16:11957659-11957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 260
               

               
Conread position:
               
354-640
               

               
Cow position:
               
chr16:31149316-31149594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
206, 33
               

               
Conread position:
               
355-537
               

               
Cow position:
               
chr16:32807365-32807185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
100, 116
               

               
Conread position:
               
356-486
               

               
Cow position:
               
chr16:35477488-35477358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
356-522
               

               
Cow position:
               
chr16:32327579-32327751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
356-540
               

               
Cow position:
               
chr16:24826000-24826184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
356-542
               

               
Cow position:
               
chr16:17288875-17289060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
356-548
               

               
Cow position:
               
chr16:7075842-7076030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
356-554
               

               
Cow position:
               
chr16:17135656-17135849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
356-554
               

               
Cow position:
               
chr16:18141400-18141202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
356-557
               

               
Cow position:
               
chr16:46430224-46430025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
356-558
               

               
Cow position:
               
chr16:13611525-13611326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
356-585
               

               
Cow position:
               
chr16:21039956-21040182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
356-591
               

               
Cow position:
               
chr16:42242187-42241954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
356-625
               

               
Cow position:
               
chr16:7152243-7151973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
197, 35
               

               
Conread position:
               
356-630
               

               
Cow position:
               
chr16:3303954-3304240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
191, 38
               

               
Conread position:
               
356-632
               

               
Cow position:
               
chr16:28879872-28880139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
184, 44
               

               
Conread position:
               
356-634
               

               
Cow position:
               
chr16:15824516-15824232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
356-637
               

               
Cow position:
               
chr16:45677906-45678190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 49
               

               
Conread position:
               
356-641
               

               
Cow position:
               
chr16:11008272-11008543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
356-645
               

               
Cow position:
               
chr16:7418314-7418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
208, 38
               

               
Conread position:
               
356-648
               

               
Cow position:
               
chr16:43308633-43308343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
357-493
               

               
Cow position:
               
chr16:22124037-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
357-503
               

               
Cow position:
               
chr16:45645765-45645614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
357-508
               

               
Cow position:
               
chr16:26030955-26030805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
357-531
               

               
Cow position:
               
chr16:570984-570818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
357-534
               

               
Cow position:
               
chr16:36203695-36203514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
357-536
               

               
Cow position:
               
chr16:5836507-5836692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
357-536
               

               
Cow position:
               
chr16:27659821-27659639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr16:14125073-14125244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr16:32781295-32781471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr16:38091295-38091115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr16:42176574-42176753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr16:44239333-44239522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
357-538
               

               
Cow position:
               
chr16:41697156-41696983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
357-540
               

               
Cow position:
               
chr16:12501232-12501050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
357-540
               

               
Cow position:
               
chr16:18402614-18402797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 158
               

               
Conread position:
               
357-540
               

               
Cow position:
               
chr16:27160936-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
357-540
               

               
Cow position:
               
chr16:31426273-31426453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
357-541
               

               
Cow position:
               
chr16:50667215-50667403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr16:23738109-23738294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr16:37669807-37669624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr16:43800989-43800806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
357-545
               

               
Cow position:
               
chr16:16933048-16933235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
357-545
               

               
Cow position:
               
chr16:17903720-17903529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
357-545
               

               
Cow position:
               
chr16:48545750-48545937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
357-546
               

               
Cow position:
               
chr16:34220113-34220303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
357-547
               

               
Cow position:
               
chr16:20069761-20069950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
357-547
               

               
Cow position:
               
chr16:48191072-48190895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
357-547
               

               
Cow position:
               
chr16:48340767-48340576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
357-548
               

               
Cow position:
               
chr16:13578932-13578742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
357-549
               

               
Cow position:
               
chr16:7619248-7619065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
357-552
               

               
Cow position:
               
chr16:48494626-48494431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
357-553
               

               
Cow position:
               
chr16:8933494-8933304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
357-553
               

               
Cow position:
               
chr16:11939971-11940161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr16:7549896-7550091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr16:9973569-9973374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr16:29608448-29608634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr16:30359131-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr16:40700799-40700612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:5363825-5364029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:14106575-14106765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:15960362-15960162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:20025376-20025568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:22327429-22327636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 195
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:33054554-33054353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:43105583-43105389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr16:56670991-56670791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
357-558
               

               
Cow position:
               
chr16:22380424-22380225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
357-558
               

               
Cow position:
               
chr16:43674804-43675003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
357-559
               

               
Cow position:
               
chr16:56796736-56796536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
357-565
               

               
Cow position:
               
chr16:31348838-31348630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
357-568
               

               
Cow position:
               
chr16:8812153-8811958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
203, 31
               

               
Conread position:
               
357-584
               

               
Cow position:
               
chr16:37452686-37452455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
357-585
               

               
Cow position:
               
chr16:35188184-35188405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
357-588
               

               
Cow position:
               
chr16:33226609-33226372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
357-588
               

               
Cow position:
               
chr16:48006563-48006328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
357-591
               

               
Cow position:
               
chr16:47964886-47964652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
200, 29
               

               
Conread position:
               
357-591
               

               
Cow position:
               
chr16:51112947-51112712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
357-606
               

               
Cow position:
               
chr16:20633949-20633696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
357-611
               

               
Cow position:
               
chr16:25386904-25387155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
357-617
               

               
Cow position:
               
chr16:12060346-12060597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
357-617
               

               
Cow position:
               
chr16:38708901-38708644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
357-619
               

               
Cow position:
               
chr16:4910597-4910327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
190, 245
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr16:14242300-14242564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr16:47852663-47852402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr16:48095834-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
357-623
               

               
Cow position:
               
chr16:49229843-49229576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
357-623
               

               
Cow position:
               
chr16:56665503-56665764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
357-624
               

               
Cow position:
               
chr16:19670420-19670159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
213, 48
               

               
Conread position:
               
357-624
               

               
Cow position:
               
chr16:20871954-20872210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
213, 30
               

               
Conread position:
               
357-624
               

               
Cow position:
               
chr16:33704736-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:7498990-7499236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:8323053-8322796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:11082932-11083196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:39474216-39473958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:45813763-45813498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:51697009-51697275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 204
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:53509053-53508792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr16:53792889-53792616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
357-626
               

               
Cow position:
               
chr16:27701323-27701057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
171, 19
               

               
Conread position:
               
357-627
               

               
Cow position:
               
chr16:42340125-42340379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
357-629
               

               
Cow position:
               
chr16:32970149-32969878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr16:26676757-26676486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr16:50289079-50289361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 167
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr16:50417758-50417506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
214, 34
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr16:52834960-52834697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
357-631
               

               
Cow position:
               
chr16:29557698-29557418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
357-631
               

               
Cow position:
               
chr16:30186573-30186851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 107
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr16:8448718-8448452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr16:10148210-10148475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr16:24855471-24855742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
167, 103
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr16:32302075-32301795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr16:52169984-52170259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr16:14685460-14685180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr16:45554372-45554642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr16:52275201-52274927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
213, 182
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr16:56358338-56358076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
181, 9
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr16:23955901-23955622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr16:31117685-31117410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
357-635
               

               
Cow position:
               
chr16:40333397-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
357-635
               

               
Cow position:
               
chr16:56565527-56565798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
357-636
               

               
Cow position:
               
chr16:25170323-25170603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
357-636
               

               
Cow position:
               
chr16:34153638-34153358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
357-636
               

               
Cow position:
               
chr16:56082433-56082151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
357-637
               

               
Cow position:
               
chr16:4857172-4856889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
357-637
               

               
Cow position:
               
chr16:51500863-51501139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
357-638
               

               
Cow position:
               
chr16:9905020-9905309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr16:8530955-8530683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr16:20476467-20476745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr16:31079161-31078887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr16:42078911-42078636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
357-640
               

               
Cow position:
               
chr16:11775119-11774835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
357-640
               

               
Cow position:
               
chr16:16597490-16597774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
190, 37
               

               
Conread position:
               
357-641
               

               
Cow position:
               
chr16:40514551-40514277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr16:6344513-6344240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr16:23472677-23472958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr16:44428809-44429095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 242
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr16:54710104-54709837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
357-643
               

               
Cow position:
               
chr16:10592364-10592651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
357-643
               

               
Cow position:
               
chr16:42734086-42733803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
357-643
               

               
Cow position:
               
chr16:46433400-46433106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 243
               

               
Conread position:
               
357-644
               

               
Cow position:
               
chr16:9552990-9553268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
357-646
               

               
Cow position:
               
chr16:7665566-7665863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
190, 52
               

               
Conread position:
               
357-646
               

               
Cow position:
               
chr16:29527753-29528063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
357-647
               

               
Cow position:
               
chr16:7583327-7583621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr16:8017897-8018181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr16:8068891-8068604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 110
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr16:10032569-10032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr16:15981467-15981167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 242
               

               
Conread position:
               
357-649
               

               
Cow position:
               
chr16:48385471-48385190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
357-649
               

               
Cow position:
               
chr16:49126259-49125966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
357-650
               

               
Cow position:
               
chr16:22984687-22984976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
192, 41
               

               
Conread position:
               
357-652
               

               
Cow position:
               
chr16:8522463-8522163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
357-653
               

               
Cow position:
               
chr16:33236347-33236055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
357-659
               

               
Cow position:
               
chr16:38243732-38243432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
265, 44
               

               
Conread position:
               
358-542
               

               
Cow position:
               
chr16:21762041-21761857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
358-547
               

               
Cow position:
               
chr16:49169454-49169263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr16:3114468-3114667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr16:4059285-4059483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr16:17945450-17945651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
358-625
               

               
Cow position:
               
chr16:8462148-8461882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
358-625
               

               
Cow position:
               
chr16:45121969-45122242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
358-633
               

               
Cow position:
               
chr16:42433185-42432909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
358-638
               

               
Cow position:
               
chr16:26649699-26649418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 47
               

               
Conread position:
               
358-640
               

               
Cow position:
               
chr16:56231757-56232031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
265, 18
               

               
Conread position:
               
358-642
               

               
Cow position:
               
chr16:17745764-17746061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 252
               

               
Conread position:
               
359-499
               

               
Cow position:
               
chr16:8279861-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
359-538
               

               
Cow position:
               
chr16:5636517-5636693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
359-542
               

               
Cow position:
               
chr16:42345676-42345501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
359-551
               

               
Cow position:
               
chr16:22804667-22804476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
359-551
               

               
Cow position:
               
chr16:40562162-40562353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
359-587
               

               
Cow position:
               
chr16:5256925-5257150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 186
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr16:7505019-7505247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
189, 130
               

               
Conread position:
               
359-621
               

               
Cow position:
               
chr16:42977394-42977670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 174
               

               
Conread position:
               
359-623
               

               
Cow position:
               
chr16:54579097-54579363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 103
               

               
Conread position:
               
359-625
               

               
Cow position:
               
chr16:33198507-33198233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
188, 88
               

               
Conread position:
               
359-627
               

               
Cow position:
               
chr16:13989913-13990168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
359-630
               

               
Cow position:
               
chr16:39165173-39165438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
359-635
               

               
Cow position:
               
chr16:47820498-47820784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 103
               

               
Conread position:
               
359-636
               

               
Cow position:
               
chr16:18354025-18353742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
359-636
               

               
Cow position:
               
chr16:48398325-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 238
               

               
Conread position:
               
359-639
               

               
Cow position:
               
chr16:820180-820466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
359-639
               

               
Cow position:
               
chr16:23681295-23681575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr16:45731457-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
211, 152
               

               
Conread position:
               
359-642
               

               
Cow position:
               
chr16:14754391-14754111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
359-643
               

               
Cow position:
               
chr16:8025918-8025648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
359-643
               

               
Cow position:
               
chr16:13306936-13306652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
191, 40
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr16:238197-238489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr16:8366899-8366615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr16:44210633-44210336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 175
               

               
Conread position:
               
360-548
               

               
Cow position:
               
chr16:22919399-22919586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
360-548
               

               
Cow position:
               
chr16:30036167-30036346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
360-548
               

               
Cow position:
               
chr16:39394503-39394689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
172, 32
               

               
Conread position:
               
360-621
               

               
Cow position:
               
chr16:41752646-41752385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
360-625
               

               
Cow position:
               
chr16:48956731-48956999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
360-637
               

               
Cow position:
               
chr16:13689597-13689876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 236
               

               
Conread position:
               
360-646
               

               
Cow position:
               
chr16:8737997-8738288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
361-517
               

               
Cow position:
               
chr16:47643348-47643502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
361-547
               

               
Cow position:
               
chr16:17282596-17282776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
361-605
               

               
Cow position:
               
chr16:41578159-41578408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 52
               

               
Conread position:
               
361-617
               

               
Cow position:
               
chr16:31561685-31561946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 236
               

               
Conread position:
               
361-639
               

               
Cow position:
               
chr16:22207005-22207272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
361-640
               

               
Cow position:
               
chr16:20824417-20824693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
362-542
               

               
Cow position:
               
chr16:11105487-11105665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
362-555
               

               
Cow position:
               
chr16:30715429-30715629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
362-588
               

               
Cow position:
               
chr16:17982207-17981982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
362-609
               

               
Cow position:
               
chr16:16570849-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
362-641
               

               
Cow position:
               
chr16:19052573-19052847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
362-641
               

               
Cow position:
               
chr16:45139606-45139878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
362-643
               

               
Cow position:
               
chr16:8065950-8065666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
362-653
               

               
Cow position:
               
chr16:42398963-42398662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
363-517
               

               
Cow position:
               
chr16:39514142-39513988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
363-522
               

               
Cow position:
               
chr16:31122320-31122157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
363-533
               

               
Cow position:
               
chr16:50370531-50370698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
363-537
               

               
Cow position:
               
chr16:50382602-50382428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
363-545
               

               
Cow position:
               
chr16:3246271-3246089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr16:47854877-47855063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
363-613
               

               
Cow position:
               
chr16:33645948-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 237
               

               
Conread position:
               
363-620
               

               
Cow position:
               
chr16:21317662-21317414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 198
               

               
Conread position:
               
363-625
               

               
Cow position:
               
chr16:17135126-17134861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
363-633
               

               
Cow position:
               
chr16:29712357-29712624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
194, 34
               

               
Conread position:
               
363-635
               

               
Cow position:
               
chr16:3047406-3047132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
363-635
               

               
Cow position:
               
chr16:4275806-4275532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
363-636
               

               
Cow position:
               
chr16:12320155-12320434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
173, 238
               

               
Conread position:
               
363-647
               

               
Cow position:
               
chr16:54226663-54226393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
364-546
               

               
Cow position:
               
chr16:4626456-4626275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr16:42633814-42633619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
364-636
               

               
Cow position:
               
chr16:9985463-9985191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
364-647
               

               
Cow position:
               
chr16:38663773-38663483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
364-647
               

               
Cow position:
               
chr16:52789988-52790252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
365-536
               

               
Cow position:
               
chr16:48146722-48146552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
365-630
               

               
Cow position:
               
chr16:11584460-11584203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
365-630
               

               
Cow position:
               
chr16:39683164-39682894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
365-642
               

               
Cow position:
               
chr16:45294480-45294764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
367-633
               

               
Cow position:
               
chr16:15370622-15370894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
367-637
               

               
Cow position:
               
chr16:55233623-55233889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
197, 38
               

               
Conread position:
               
367-648
               

               
Cow position:
               
chr16:19643824-19644108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
368-557
               

               
Cow position:
               
chr16:45785675-45785865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
368-589
               

               
Cow position:
               
chr16:11615305-11615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
368-634
               

               
Cow position:
               
chr16:29655257-29655523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
369-648
               

               
Cow position:
               
chr16:2223460-2223170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
370-625
               

               
Cow position:
               
chr16:11806611-11806854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
370-646
               

               
Cow position:
               
chr16:7136406-7136125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 227
               

               
Conread position:
               
372-630
               

               
Cow position:
               
chr16:51043596-51043851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
373-643
               

               
Cow position:
               
chr16:589764-589505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
373-649
               

               
Cow position:
               
chr16:55683247-55683522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
378-547
               

               
Cow position:
               
chr16:15953871-15953701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
378-585
               

               
Cow position:
               
chr16:39172198-39171994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
201, 111
               

               
Conread position:
               
380-542
               

               
Cow position:
               
chr16:11790964-11791123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
380-623
               

               
Cow position:
               
chr16:47518796-47519030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
136, 176
               

               
Conread position:
               
380-646
               

               
Cow position:
               
chr16:20921107-20921374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
381-557
               

               
Cow position:
               
chr16:12010047-12010223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr16:7626113-7626359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
189, 21
               

               
Conread position:
               
384-625
               

               
Cow position:
               
chr16:6609546-6609309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
385-631
               

               
Cow position:
               
chr16:9578537-9578287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
386-527
               

               
Cow position:
               
chr16:10352838-10352981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
387-625
               

               
Cow position:
               
chr16:27728217-27728449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 209
               

               
Conread position:
               
387-633
               

               
Cow position:
               
chr16:28396122-28395883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 16
               

               
Conread position:
               
388-519
               

               
Cow position:
               
chr16:19815289-19815157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
388-547
               

               
Cow position:
               
chr16:12133819-12133980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
391-518
               

               
Cow position:
               
chr16:9597488-9597362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
391-555
               

               
Cow position:
               
chr16:13414702-13414540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
391-624
               

               
Cow position:
               
chr16:37401213-37401438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
392-554
               

               
Cow position:
               
chr16:22738245-22738399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
392-559
               

               
Cow position:
               
chr16:15905287-15905120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-562
               

               
Cow position:
               
chr16:30037022-30036859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
392-621
               

               
Cow position:
               
chr16:17142897-17143134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
145, 211
               

               
Conread position:
               
392-632
               

               
Cow position:
               
chr16:13712972-13712736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 191
               

               
Conread position:
               
393-547
               

               
Cow position:
               
chr16:44713517-44713362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
393-554
               

               
Cow position:
               
chr16:17460131-17460288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
393-554
               

               
Cow position:
               
chr16:45046800-45046963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
394-554
               

               
Cow position:
               
chr16:33235194-33235037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
394-637
               

               
Cow position:
               
chr16:56595422-56595175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
394-646
               

               
Cow position:
               
chr16:33595972-33595727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 147
               

               
Conread position:
               
394-648
               

               
Cow position:
               
chr16:49860197-49860457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
395-625
               

               
Cow position:
               
chr16:51598646-51598413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
395-632
               

               
Cow position:
               
chr16:36121018-36120788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
395-695
               

               
Cow position:
               
chr16:280715-280426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
396-546
               

               
Cow position:
               
chr16:39616692-39616839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
396-632
               

               
Cow position:
               
chr16:44138525-44138284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 63
               

               
Conread position:
               
397-561
               

               
Cow position:
               
chr16:10945470-10945308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
397-636
               

               
Cow position:
               
chr16:52636416-52636184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
398-619
               

               
Cow position:
               
chr16:32893597-32893813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
149, 167
               

               
Conread position:
               
399-621
               

               
Cow position:
               
chr16:9958799-9959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 200
               

               
Conread position:
               
399-625
               

               
Cow position:
               
chr16:12324425-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
165, 199
               

               
Conread position:
               
400-554
               

               
Cow position:
               
chr16:22329132-22329286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
400-640
               

               
Cow position:
               
chr16:34291320-34291084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 157
               

               
Conread position:
               
400-649
               

               
Cow position:
               
chr16:50282462-50282208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
401-519
               

               
Cow position:
               
chr16:35501386-35501504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
401-639
               

               
Cow position:
               
chr16:41807128-41806910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
402-630
               

               
Cow position:
               
chr16:11660485-11660266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
403-557
               

               
Cow position:
               
chr16:17292048-17291893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
403-558
               

               
Cow position:
               
chr16:11390312-11390154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
403-559
               

               
Cow position:
               
chr16:19408554-19408398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr16:7723675-7723899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr16:17283420-17283642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
403-629
               

               
Cow position:
               
chr16:11359125-11359352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 192
               

               
Conread position:
               
403-634
               

               
Cow position:
               
chr16:53408956-53408737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
167, 119
               

               
Conread position:
               
403-640
               

               
Cow position:
               
chr16:41530326-41530094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 143
               

               
Conread position:
               
403-642
               

               
Cow position:
               
chr16:15407583-15407339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
403-644
               

               
Cow position:
               
chr16:18048181-18047934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 195
               

               
Conread position:
               
403-648
               

               
Cow position:
               
chr16:25484313-25484549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
404-542
               

               
Cow position:
               
chr16:21370212-21370077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
404-545
               

               
Cow position:
               
chr16:15715983-15715843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
404-591
               

               
Cow position:
               
chr16:45676889-45676702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
404-631
               

               
Cow position:
               
chr16:1582951-1582722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 196
               

               
Conread position:
               
404-643
               

               
Cow position:
               
chr16:48613500-48613262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
405-557
               

               
Cow position:
               
chr16:16025412-16025563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
406-537
               

               
Cow position:
               
chr16:15945279-15945149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
406-557
               

               
Cow position:
               
chr16:24591829-24591981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr16:29026186-29026330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
407-626
               

               
Cow position:
               
chr16:51578459-51578248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
408-507
               

               
Cow position:
               
chr16:13752153-13752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
408-648
               

               
Cow position:
               
chr16:13696702-13696456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
408-648
               

               
Cow position:
               
chr16:53451684-53451929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
134, 190
               

               
Conread position:
               
410-621
               

               
Cow position:
               
chr16:7546845-7546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
411-557
               

               
Cow position:
               
chr16:19003551-19003404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
413-632
               

               
Cow position:
               
chr16:9596354-9596571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
413-639
               

               
Cow position:
               
chr16:50286497-50286728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
414-632
               

               
Cow position:
               
chr16:5382163-5382394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 193
               

               
Conread position:
               
414-636
               

               
Cow position:
               
chr16:7496242-7496460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
414-645
               

               
Cow position:
               
chr16:35297391-35297627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
415-534
               

               
Cow position:
               
chr16:40540322-40540437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
417-636
               

               
Cow position:
               
chr16:14376770-14376992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
418-634
               

               
Cow position:
               
chr16:31484673-31484457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
419-569
               

               
Cow position:
               
chr16:31046690-31046544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
419-641
               

               
Cow position:
               
chr16:29636241-29636031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
423-557
               

               
Cow position:
               
chr16:49174285-49174413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
424-557
               

               
Cow position:
               
chr16:29145287-29145158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
426-613
               

               
Cow position:
               
chr16:17736235-17736416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
427-587
               

               
Cow position:
               
chr16:34205066-34204900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
428-557
               

               
Cow position:
               
chr16:24142959-24142831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
428-621
               

               
Cow position:
               
chr16:46552793-46552988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
119, 133
               

               
Conread position:
               
428-624
               

               
Cow position:
               
chr16:30211453-30211648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
142, 166
               

               
Conread position:
               
428-640
               

               
Cow position:
               
chr16:7928386-7928164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 174
               

               
Conread position:
               
428-646
               

               
Cow position:
               
chr16:19053884-19053667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
175, 131
               

               
Conread position:
               
432-621
               

               
Cow position:
               
chr16:17474768-17474952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
432-631
               

               
Cow position:
               
chr16:11653141-11653336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 104
               

               
Conread position:
               
432-634
               

               
Cow position:
               
chr16:19402759-19402555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 98
               

               
Conread position:
               
432-638
               

               
Cow position:
               
chr16:9513297-9513507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 165
               

               
Conread position:
               
432-652
               

               
Cow position:
               
chr16:19478762-19478540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 170
               

               
Conread position:
               
433-554
               

               
Cow position:
               
chr16:20265559-20265438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-591
               

               
Cow position:
               
chr16:39385495-39385658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
435-623
               

               
Cow position:
               
chr16:40029878-40029687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 163
               

               
Conread position:
               
436-641
               

               
Cow position:
               
chr16:7912136-7912341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
437-647
               

               
Cow position:
               
chr16:8810086-8809874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 159
               

               
Conread position:
               
438-640
               

               
Cow position:
               
chr16:9836764-9836568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
438-646
               

               
Cow position:
               
chr16:45193800-45193584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 162
               

               
Conread position:
               
439-636
               

               
Cow position:
               
chr16:11019506-11019302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
440-640
               

               
Cow position:
               
chr16:33290395-33290602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 162
               

               
Conread position:
               
441-636
               

               
Cow position:
               
chr16:10249807-10249605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 161
               

               
Conread position:
               
441-638
               

               
Cow position:
               
chr16:4102819-4102628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
181, 114
               

               
Conread position:
               
443-633
               

               
Cow position:
               
chr16:16178046-16178233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
444-611
               

               
Cow position:
               
chr16:14226753-14226592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
444-657
               

               
Cow position:
               
chr16:45826703-45826484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
446-634
               

               
Cow position:
               
chr16:19497004-19496810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
446-641
               

               
Cow position:
               
chr16:9097040-9097242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
103, 156
               

               
Conread position:
               
448-621
               

               
Cow position:
               
chr16:51143818-51143995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
448-625
               

               
Cow position:
               
chr16:38355410-38355231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 116
               

               
Conread position:
               
448-633
               

               
Cow position:
               
chr16:13290533-13290707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
448-639
               

               
Cow position:
               
chr16:18429606-18429803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 152
               

               
Conread position:
               
449-647
               

               
Cow position:
               
chr16:26069772-26069960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
450-625
               

               
Cow position:
               
chr16:50569284-50569460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
450-646
               

               
Cow position:
               
chr16:4616662-4616463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
457-642
               

               
Cow position:
               
chr16:15252024-15251843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
459-625
               

               
Cow position:
               
chr16:41696038-41696206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 147
               

               
Conread position:
               
459-652
               

               
Cow position:
               
chr16:13906416-13906226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
460-633
               

               
Cow position:
               
chr16:5293645-5293821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
462-625
               

               
Cow position:
               
chr16:48130362-48130196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
462-650
               

               
Cow position:
               
chr16:31011360-31011557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
463-625
               

               
Cow position:
               
chr16:49734112-49733945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 137
               

               
Conread position:
               
463-638
               

               
Cow position:
               
chr16:3938977-3938799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
463-640
               

               
Cow position:
               
chr16:5396783-5396599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 137
               

               
Conread position:
               
465-655
               

               
Cow position:
               
chr16:56285651-56285464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 103
               

               
Conread position:
               
470-613
               

               
Cow position:
               
chr16:47774001-47774137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
470-630
               

               
Cow position:
               
chr16:23515725-23515560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
477-643
               

               
Cow position:
               
chr16:23881163-23880991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
488-647
               

               
Cow position:
               
chr16:23033886-23034051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 109
               
Show alignments to all cow chromosomes.