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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-55M18.5
        

               
Conread position:
               
327-614
               

               
Cow position:
               
chr23:2285739-2286015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
329-620
               

               
Cow position:
               
chr23:10416516-10416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
336-631
               

               
Cow position:
               
chr23:7696472-7696749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
340-521
               

               
Cow position:
               
chr23:1733079-1733254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
340-635
               

               
Cow position:
               
chr23:13555523-13555221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
196, 58
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr23:20539297-20539586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 225
               

               
Conread position:
               
342-648
               

               
Cow position:
               
chr23:18749147-18748852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
347-552
               

               
Cow position:
               
chr23:349029-348823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
348-551
               

               
Cow position:
               
chr23:22105483-22105684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
351-554
               

               
Cow position:
               
chr23:1525576-1525773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
352-551
               

               
Cow position:
               
chr23:21309485-21309289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
353-518
               

               
Cow position:
               
chr23:4329754-4329580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
353-558
               

               
Cow position:
               
chr23:1398108-1397908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
353-630
               

               
Cow position:
               
chr23:4646437-4646713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
355-542
               

               
Cow position:
               
chr23:1721054-1720868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
355-635
               

               
Cow position:
               
chr23:31493793-31494077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
183, 44
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr23:11473578-11473395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
356-542
               

               
Cow position:
               
chr23:40844583-40844764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
356-547
               

               
Cow position:
               
chr23:40637186-40637376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
356-554
               

               
Cow position:
               
chr23:24867236-24867434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
44, 190
               

               
Conread position:
               
356-554
               

               
Cow position:
               
chr23:39275820-39276023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
356-557
               

               
Cow position:
               
chr23:1923906-1923708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
356-581
               

               
Cow position:
               
chr23:21764848-21765074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
356-588
               

               
Cow position:
               
chr23:12334137-12334370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
356-591
               

               
Cow position:
               
chr23:21446050-21446284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
357-480
               

               
Cow position:
               
chr23:2801754-2801630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
357-505
               

               
Cow position:
               
chr23:16563772-16563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
357-522
               

               
Cow position:
               
chr23:4470570-4470405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
357-522
               

               
Cow position:
               
chr23:19769519-19769679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
357-523
               

               
Cow position:
               
chr23:39806798-39806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
357-534
               

               
Cow position:
               
chr23:11845207-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
357-534
               

               
Cow position:
               
chr23:27544760-27544934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr23:4795104-4795279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
357-537
               

               
Cow position:
               
chr23:35938272-35938455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
357-539
               

               
Cow position:
               
chr23:3830269-3830089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
357-540
               

               
Cow position:
               
chr23:1697608-1697785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr23:11045417-11045601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 112
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr23:17404770-17404953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr23:20002186-20002369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr23:35369114-35368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
357-546
               

               
Cow position:
               
chr23:5540091-5540266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
357-547
               

               
Cow position:
               
chr23:33622221-33622030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
357-548
               

               
Cow position:
               
chr23:3431000-3431188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
357-548
               

               
Cow position:
               
chr23:16700107-16699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
357-548
               

               
Cow position:
               
chr23:22298104-22297918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
357-549
               

               
Cow position:
               
chr23:6592768-6592587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
357-550
               

               
Cow position:
               
chr23:5162359-5162552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
357-553
               

               
Cow position:
               
chr23:3223505-3223325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-553
               

               
Cow position:
               
chr23:9734346-9734534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr23:1767761-1767959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr23:29034248-29034441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr23:30950888-30951082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr23:39780687-39780881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
357-556
               

               
Cow position:
               
chr23:1876642-1876840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:3967627-3967430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:5706925-5707123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:13945967-13946167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:21336555-21336356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 188
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:21440070-21439871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:21502708-21502501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:33717609-33717413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:38455250-38455048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:38503176-38502978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 150
               

               
Conread position:
               
357-557
               

               
Cow position:
               
chr23:38845537-38845728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
357-558
               

               
Cow position:
               
chr23:3282192-3281990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
357-558
               

               
Cow position:
               
chr23:18402357-18402160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
357-558
               

               
Cow position:
               
chr23:29069511-29069312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
357-560
               

               
Cow position:
               
chr23:13599276-13599472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
201, 42
               

               
Conread position:
               
357-567
               

               
Cow position:
               
chr23:3433979-3433774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
357-586
               

               
Cow position:
               
chr23:6367538-6367763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
357-591
               

               
Cow position:
               
chr23:3394564-3394329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
357-591
               

               
Cow position:
               
chr23:7361048-7361266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
357-609
               

               
Cow position:
               
chr23:21452800-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
357-612
               

               
Cow position:
               
chr23:14164469-14164209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 210
               

               
Conread position:
               
357-613
               

               
Cow position:
               
chr23:22586820-22587068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr23:14838809-14838563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr23:20194985-20194732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
357-621
               

               
Cow position:
               
chr23:22804657-22804920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
357-623
               

               
Cow position:
               
chr23:5795409-5795676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
192, 90
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:385381-385106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:1222308-1222039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 230
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:1583462-1583719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
207, 57
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:2282243-2281986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
214, 37
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:6148113-6147851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:9226206-9226476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:15743023-15743293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
188, 34
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:17486895-17486620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:22573985-22573704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:24509633-24509886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:29345829-29345575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
357-625
               

               
Cow position:
               
chr23:33628857-33629124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 241
               

               
Conread position:
               
357-628
               

               
Cow position:
               
chr23:11129162-11129441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
357-629
               

               
Cow position:
               
chr23:16582977-16582701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr23:33711693-33711969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
357-631
               

               
Cow position:
               
chr23:16881231-16880962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
357-631
               

               
Cow position:
               
chr23:26841357-26841630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
357-631
               

               
Cow position:
               
chr23:34611543-34611285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr23:3293623-3293899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr23:25864762-25864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr23:4726719-4727003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr23:5237499-5237228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 191
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr23:16961227-16961497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
357-635
               

               
Cow position:
               
chr23:1290225-1290519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
357-636
               

               
Cow position:
               
chr23:26825009-26825266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
244, 43
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr23:534159-534445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr23:1885240-1884958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr23:5881587-5881304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 59
               

               
Conread position:
               
357-639
               

               
Cow position:
               
chr23:11224789-11225072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
357-640
               

               
Cow position:
               
chr23:7845224-7845504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
181, 42
               

               
Conread position:
               
357-641
               

               
Cow position:
               
chr23:20744662-20744364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
357-641
               

               
Cow position:
               
chr23:35965074-35965367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr23:12363687-12363399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 52
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr23:13520382-13520663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
357-642
               

               
Cow position:
               
chr23:24704213-24704501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 243
               

               
Conread position:
               
357-643
               

               
Cow position:
               
chr23:22414375-22414089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
357-643
               

               
Cow position:
               
chr23:39778330-39778619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
357-647
               

               
Cow position:
               
chr23:32480102-32479792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 257
               

               
Conread position:
               
357-647
               

               
Cow position:
               
chr23:35239279-35239574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr23:5732481-5732763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr23:24685183-24685468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr23:39813435-39813730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
357-651
               

               
Cow position:
               
chr23:35247297-35247590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
358-554
               

               
Cow position:
               
chr23:6995050-6994856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
358-554
               

               
Cow position:
               
chr23:24926744-24926941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr23:18296741-18296937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr23:38208658-38208856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr23:10876328-10876558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
358-625
               

               
Cow position:
               
chr23:5451257-5451524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
358-632
               

               
Cow position:
               
chr23:1863404-1863669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
358-642
               

               
Cow position:
               
chr23:38973780-38974054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
358-648
               

               
Cow position:
               
chr23:14523916-14524211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
358-658
               

               
Cow position:
               
chr23:11212438-11212740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
359-539
               

               
Cow position:
               
chr23:1403871-1403694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
359-547
               

               
Cow position:
               
chr23:2799513-2799699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
359-547
               

               
Cow position:
               
chr23:39775658-39775845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
359-554
               

               
Cow position:
               
chr23:8917741-8917552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
359-556
               

               
Cow position:
               
chr23:36172455-36172653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
359-621
               

               
Cow position:
               
chr23:1981721-1981475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
211, 40
               

               
Conread position:
               
359-625
               

               
Cow position:
               
chr23:6244656-6244399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
359-625
               

               
Cow position:
               
chr23:19872741-19872498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
211, 32
               

               
Conread position:
               
359-631
               

               
Cow position:
               
chr23:5436711-5436431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
359-634
               

               
Cow position:
               
chr23:1776700-1776442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
359-636
               

               
Cow position:
               
chr23:18822925-18823197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
359-641
               

               
Cow position:
               
chr23:18286125-18286400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
212, 68
               

               
Conread position:
               
359-642
               

               
Cow position:
               
chr23:187111-187399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
359-647
               

               
Cow position:
               
chr23:5426364-5426661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 245
               

               
Conread position:
               
359-655
               

               
Cow position:
               
chr23:18902114-18901834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 31
               

               
Conread position:
               
360-516
               

               
Cow position:
               
chr23:308868-308715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
360-624
               

               
Cow position:
               
chr23:6172736-6172485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
187, 34
               

               
Conread position:
               
360-634
               

               
Cow position:
               
chr23:1883327-1883604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 238
               

               
Conread position:
               
361-542
               

               
Cow position:
               
chr23:6035371-6035545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
361-621
               

               
Cow position:
               
chr23:283461-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 183
               

               
Conread position:
               
361-625
               

               
Cow position:
               
chr23:24966529-24966259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
361-634
               

               
Cow position:
               
chr23:40275609-40275346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 58
               

               
Conread position:
               
361-640
               

               
Cow position:
               
chr23:40995107-40995381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
195, 108
               

               
Conread position:
               
361-646
               

               
Cow position:
               
chr23:19760853-19760559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
362-625
               

               
Cow position:
               
chr23:40443794-40444058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
363-537
               

               
Cow position:
               
chr23:5400603-5400771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
363-558
               

               
Cow position:
               
chr23:16076224-16076034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
363-575
               

               
Cow position:
               
chr23:1589523-1589738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
363-621
               

               
Cow position:
               
chr23:29626352-29626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
363-631
               

               
Cow position:
               
chr23:13202424-13202162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
363-636
               

               
Cow position:
               
chr23:38732185-38732444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
363-642
               

               
Cow position:
               
chr23:1438230-1438497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
363-646
               

               
Cow position:
               
chr23:12091421-12091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 28
               

               
Conread position:
               
363-648
               

               
Cow position:
               
chr23:1614721-1614435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
364-621
               

               
Cow position:
               
chr23:1532844-1533098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
177, 35
               

               
Conread position:
               
364-636
               

               
Cow position:
               
chr23:19565387-19565661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
364-637
               

               
Cow position:
               
chr23:16744498-16744756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
365-554
               

               
Cow position:
               
chr23:1428749-1428936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
365-633
               

               
Cow position:
               
chr23:40391414-40391685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
365-639
               

               
Cow position:
               
chr23:2501915-2501641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
365-649
               

               
Cow position:
               
chr23:26986333-26986044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 119
               

               
Conread position:
               
366-633
               

               
Cow position:
               
chr23:39330349-39330085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
367-542
               

               
Cow position:
               
chr23:3408972-3408790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
367-622
               

               
Cow position:
               
chr23:20388708-20388467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
203, 5
               

               
Conread position:
               
368-641
               

               
Cow position:
               
chr23:39049494-39049223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
372-551
               

               
Cow position:
               
chr23:4877303-4877484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
372-560
               

               
Cow position:
               
chr23:3244520-3244336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
375-632
               

               
Cow position:
               
chr23:25990489-25990230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
376-613
               

               
Cow position:
               
chr23:2160685-2160452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
385-608
               

               
Cow position:
               
chr23:6767863-6768097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
385-645
               

               
Cow position:
               
chr23:20093284-20093025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
385-645
               

               
Cow position:
               
chr23:41348667-41348405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
386-647
               

               
Cow position:
               
chr23:40348684-40348420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
387-540
               

               
Cow position:
               
chr23:30655848-30655701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
389-647
               

               
Cow position:
               
chr23:2358842-2359100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
391-547
               

               
Cow position:
               
chr23:11315069-11314914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
391-635
               

               
Cow position:
               
chr23:23904364-23904134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
392-551
               

               
Cow position:
               
chr23:23409699-23409857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
392-622
               

               
Cow position:
               
chr23:29479852-29480074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
392-634
               

               
Cow position:
               
chr23:40789937-40790176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
394-570
               

               
Cow position:
               
chr23:9268550-9268720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
395-554
               

               
Cow position:
               
chr23:4104366-4104522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
395-554
               

               
Cow position:
               
chr23:32411879-32412044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
395-621
               

               
Cow position:
               
chr23:30311964-30311732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 148
               

               
Conread position:
               
396-547
               

               
Cow position:
               
chr23:5609111-5608957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
397-651
               

               
Cow position:
               
chr23:2470973-2471234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 12
               

               
Conread position:
               
400-648
               

               
Cow position:
               
chr23:4003617-4003875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 191
               

               
Conread position:
               
402-516
               

               
Cow position:
               
chr23:7138371-7138258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
402-542
               

               
Cow position:
               
chr23:4864406-4864546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
402-557
               

               
Cow position:
               
chr23:4336045-4336196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
402-625
               

               
Cow position:
               
chr23:2457425-2457633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
403-521
               

               
Cow position:
               
chr23:3279901-3279789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
403-536
               

               
Cow position:
               
chr23:5449681-5449812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
403-546
               

               
Cow position:
               
chr23:13624822-13624686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
403-547
               

               
Cow position:
               
chr23:29459123-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
403-557
               

               
Cow position:
               
chr23:18605431-18605279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
403-629
               

               
Cow position:
               
chr23:8063520-8063734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
403-630
               

               
Cow position:
               
chr23:1760870-1760627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 209
               

               
Conread position:
               
403-633
               

               
Cow position:
               
chr23:20615351-20615137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
403-641
               

               
Cow position:
               
chr23:26283700-26283937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 97
               

               
Conread position:
               
403-648
               

               
Cow position:
               
chr23:8698395-8698648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
5, 202
               

               
Conread position:
               
404-537
               

               
Cow position:
               
chr23:28798054-28798185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
404-557
               

               
Cow position:
               
chr23:3814304-3814151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-557
               

               
Cow position:
               
chr23:17231126-17231278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
404-625
               

               
Cow position:
               
chr23:23197323-23197528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
404-644
               

               
Cow position:
               
chr23:7709767-7710002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
165, 126
               

               
Conread position:
               
404-647
               

               
Cow position:
               
chr23:39203091-39202848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
405-542
               

               
Cow position:
               
chr23:4054195-4054332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-542
               

               
Cow position:
               
chr23:40781308-40781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
405-547
               

               
Cow position:
               
chr23:5785822-5785964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-648
               

               
Cow position:
               
chr23:4844584-4844838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
406-622
               

               
Cow position:
               
chr23:40095165-40095381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
406-623
               

               
Cow position:
               
chr23:10497679-10497896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 5
               

               
Conread position:
               
406-631
               

               
Cow position:
               
chr23:39267763-39267993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 194
               

               
Conread position:
               
406-633
               

               
Cow position:
               
chr23:1585422-1585189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 195
               

               
Conread position:
               
406-636
               

               
Cow position:
               
chr23:22238843-22238607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
153, 199
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr23:2488013-2487864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
407-647
               

               
Cow position:
               
chr23:14895694-14895465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
408-554
               

               
Cow position:
               
chr23:14569520-14569372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
408-557
               

               
Cow position:
               
chr23:3835614-3835466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
411-630
               

               
Cow position:
               
chr23:1877912-1877691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 189
               

               
Conread position:
               
411-636
               

               
Cow position:
               
chr23:1194508-1194282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
139, 185
               

               
Conread position:
               
412-639
               

               
Cow position:
               
chr23:17597411-17597636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 185
               

               
Conread position:
               
413-553
               

               
Cow position:
               
chr23:37118724-37118588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
414-625
               

               
Cow position:
               
chr23:18739478-18739259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
414-649
               

               
Cow position:
               
chr23:1652988-1653234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
415-625
               

               
Cow position:
               
chr23:40081501-40081701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
415-625
               

               
Cow position:
               
chr23:40501110-40500894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 109
               

               
Conread position:
               
415-633
               

               
Cow position:
               
chr23:22668517-22668301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
416-547
               

               
Cow position:
               
chr23:33160709-33160581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
416-557
               

               
Cow position:
               
chr23:13511711-13511855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
417-590
               

               
Cow position:
               
chr23:36022796-36022620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
417-647
               

               
Cow position:
               
chr23:5686632-5686409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
207, 142
               

               
Conread position:
               
418-625
               

               
Cow position:
               
chr23:35656402-35656611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
418-649
               

               
Cow position:
               
chr23:32621274-32621518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 186
               

               
Conread position:
               
420-619
               

               
Cow position:
               
chr23:21423761-21423962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
421-647
               

               
Cow position:
               
chr23:27848988-27849217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
5, 183
               

               
Conread position:
               
427-625
               

               
Cow position:
               
chr23:5395476-5395281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
428-557
               

               
Cow position:
               
chr23:204281-204408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
428-585
               

               
Cow position:
               
chr23:21945379-21945214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
428-643
               

               
Cow position:
               
chr23:25968425-25968636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
428-647
               

               
Cow position:
               
chr23:12405819-12405598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
430-589
               

               
Cow position:
               
chr23:14191775-14191939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
430-647
               

               
Cow position:
               
chr23:7155690-7155477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
432-625
               

               
Cow position:
               
chr23:24809433-24809235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
433-547
               

               
Cow position:
               
chr23:38499320-38499438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
433-650
               

               
Cow position:
               
chr23:9131955-9131737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
434-625
               

               
Cow position:
               
chr23:24718795-24718601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 159
               

               
Conread position:
               
434-636
               

               
Cow position:
               
chr23:22530432-22530224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
434-652
               

               
Cow position:
               
chr23:19179369-19179141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 179
               

               
Conread position:
               
435-643
               

               
Cow position:
               
chr23:1680318-1680509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
437-638
               

               
Cow position:
               
chr23:6179536-6179334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 162
               

               
Conread position:
               
438-625
               

               
Cow position:
               
chr23:36200415-36200601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
438-646
               

               
Cow position:
               
chr23:22826430-22826230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 101
               

               
Conread position:
               
439-557
               

               
Cow position:
               
chr23:18354661-18354778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
439-557
               

               
Cow position:
               
chr23:23114070-23114188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-635
               

               
Cow position:
               
chr23:17392634-17392820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
184, 30
               

               
Conread position:
               
439-636
               

               
Cow position:
               
chr23:23104480-23104278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
439-639
               

               
Cow position:
               
chr23:17484834-17484643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
439-648
               

               
Cow position:
               
chr23:16877018-16877226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
440-625
               

               
Cow position:
               
chr23:1490373-1490556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
441-625
               

               
Cow position:
               
chr23:17012725-17012540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 103
               

               
Conread position:
               
444-625
               

               
Cow position:
               
chr23:28814392-28814581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
445-584
               

               
Cow position:
               
chr23:18417110-18417249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 113
               

               
Conread position:
               
446-630
               

               
Cow position:
               
chr23:1480658-1480849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 165
               

               
Conread position:
               
446-630
               

               
Cow position:
               
chr23:4979263-4979076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
446-635
               

               
Cow position:
               
chr23:16664383-16664191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
114, 152
               

               
Conread position:
               
446-642
               

               
Cow position:
               
chr23:1276872-1277063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
446-649
               

               
Cow position:
               
chr23:33232683-33232471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
447-647
               

               
Cow position:
               
chr23:1429806-1429611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
448-625
               

               
Cow position:
               
chr23:672620-672784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
451-648
               

               
Cow position:
               
chr23:1510903-1510702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 148
               

               
Conread position:
               
454-635
               

               
Cow position:
               
chr23:11053868-11053686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
454-644
               

               
Cow position:
               
chr23:15056544-15056356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
455-569
               

               
Cow position:
               
chr23:14753263-14753377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
459-641
               

               
Cow position:
               
chr23:1916212-1916395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
462-547
               

               
Cow position:
               
chr23:35199375-35199460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
462-591
               

               
Cow position:
               
chr23:61917-61788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
462-621
               

               
Cow position:
               
chr23:4042490-4042647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
462-621
               

               
Cow position:
               
chr23:21638411-21638571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
462-643
               

               
Cow position:
               
chr23:4338312-4338127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
463-633
               

               
Cow position:
               
chr23:20725652-20725481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
464-621
               

               
Cow position:
               
chr23:5603709-5603549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
470-631
               

               
Cow position:
               
chr23:18822393-18822224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
470-634
               

               
Cow position:
               
chr23:25933200-25933360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 97
               

               
Conread position:
               
473-634
               

               
Cow position:
               
chr23:3917819-3917659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
490-625
               

               
Cow position:
               
chr23:1891412-1891280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 17
               
Show alignments to all cow chromosomes.