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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-93B09.5
        

               
Conread position:
               
1-323
               

               
Cow position:
               
chr10:48255505-48255181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr10:39123982-39123809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr10:9675737-9675280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr10:48377928-48377702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr10:2185053-2185264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr10:8923656-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr10:37444495-37444279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr10:69564333-69564770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr10:26209540-26209048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr10:66127578-66128048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr10:45113728-45113865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-150
               

               
Cow position:
               
chr10:25259750-25259895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr10:58066412-58066264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
6-159
               

               
Cow position:
               
chr10:69998225-69998070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr10:10699788-10699627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr10:10046326-10046171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr10:11317753-11317910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-168
               

               
Cow position:
               
chr10:5264423-5264582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chr10:42230387-42230556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr10:26608166-26607985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr10:61305004-61305183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr10:19503751-19503569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr10:47976610-47976789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr10:60389036-60388853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr10:5847781-5847592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr10:28835953-28836140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 12
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr10:11217335-11217533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr10:53686088-53686288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr10:56686834-56686631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr10:9798471-9798263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr10:11487256-11487052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr10:24871610-24871823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr10:7328452-7328665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr10:20505264-20505477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr10:19402658-19402874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr10:38274166-38274381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr10:888649-888867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr10:2394740-2394525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr10:20446822-20447036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr10:27362216-27362431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr10:35912022-35911808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr10:19678590-19678815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr10:51925142-51925364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr10:56835001-56835226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr10:59675884-59675662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr10:57736442-57736214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr10:21428368-21428600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr10:60032853-60032620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:1087742-1087968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:1719808-1719573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:4994833-4994613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:9342016-9341781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:22786623-22786847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:24971874-24971662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:41985165-41984938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr10:49568926-49569154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr10:33002517-33002286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr10:69840050-69840282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr10:23447921-23447675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr10:54799340-54799588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr10:21037032-21037277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr10:46226809-46227078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr10:34554366-34554102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr10:20398922-20399194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr10:55097959-55097702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
265, 12
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr10:55580540-55580265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr10:33867654-33867385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr10:69698706-69698990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr10:6173079-6173376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr10:34906431-34906734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr10:35857332-35857039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr10:67716706-67717010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr10:39268318-39268631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr10:10191234-10191554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr10:15294089-15294403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr10:15292994-15293307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr10:18636126-18636449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:10859508-10859188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:13169749-13169428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:23242254-23241931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:29322603-29322923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:33891365-33891041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:36001928-36002240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:47711093-47711412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:54155639-54155320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr10:63778276-63778598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr10:35767356-35767046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr10:58259793-58259481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr10:1427765-1428084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr10:45769763-45770092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr10:52046588-52046915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr10:66211575-66211243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr10:38725382-38725704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr10:29628228-29627915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr10:30441321-30440995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr10:44817505-44817825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr10:53083887-53084221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:24547981-24548306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:35903222-35902900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr10:54375718-54375377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr10:64876239-64876579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr10:6252762-6252435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr10:35753238-35752901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr10:53357619-53357957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr10:54469660-54469332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr10:59839563-59839226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr10:43438592-43438939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr10:1749299-1749657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr10:68829544-68829213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr10:20897025-20897363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr10:23936206-23936553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr10:38014095-38014441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr10:13311454-13311813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr10:65132681-65133032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr10:35796591-35796245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr10:21448171-21447818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
263, 12
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr10:49045566-49045930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr10:8934209-8934563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr10:30360252-30360611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr10:28039209-28038838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr10:15872140-15871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr10:17175755-17176129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr10:15115338-15115716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr10:34430492-34430124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:6529921-6530289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:9083021-9083405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:10134701-10135090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:22472038-22472427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:31791538-31791160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:44783063-44783447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:56475191-56475570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr10:59675530-59675150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:77112-77479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:20132805-20132419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:22048971-22049362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:27749397-27749781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:39110273-39109910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
314, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr10:51696475-51696850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 12
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr10:32583638-32584028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr10:13586436-13586824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr10:23886723-23886334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
218, 12
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr10:11247701-11248108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr10:50359637-50360041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr10:53973571-53973973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr10:6407678-6408087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr10:69033809-69033423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr10:53248286-53247871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr10:62114420-62114829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr10:52278443-52278867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr10:24096657-24096218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr10:29188638-29188201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr10:38942148-38942586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-435
               

               
Cow position:
               
chr10:32503173-32503586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr10:1488572-1488984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr10:27717116-27716681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr10:46829597-46830025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr10:10720954-10720515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-438
               

               
Cow position:
               
chr10:2974367-2973926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr10:6851994-6852423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr10:7367061-7366633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr10:37235829-37235390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-441
               

               
Cow position:
               
chr10:33215519-33215953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-441
               

               
Cow position:
               
chr10:33665562-33666003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr10:8403924-8404368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr10:13765441-13765002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr10:22528179-22527758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr10:31362487-31362057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:8093593-8093160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:13391331-13390903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:16645472-16645024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:42745635-42746073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:56828598-56828157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr10:65345728-65345301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:1976598-1976154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:1978941-1978508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:2856813-2857211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:7304294-7304729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:10752258-10751823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:11967124-11966680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:13368073-13368521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:14946989-14947417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:17844491-17844929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:19104460-19104018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:19394856-19394402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:19895122-19895558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:20095478-20095931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:20552909-20553343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:24752880-24753300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:24870887-24871335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:25342309-25342746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:29166001-29166444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:30224405-30224835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:30914219-30914649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:31401176-31400735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:33163432-33163893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:35731803-35731364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:37287455-37287009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:37529547-37529110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:38943981-38944423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:41397202-41397639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:45370780-45371221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:45729200-45728797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:48259508-48259081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:49146255-49146671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:49846498-49846939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:49923631-49923202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:50110181-50109734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:50332315-50332758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:50390505-50390930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:52569317-52569759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:54504324-54504767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:54848500-54848941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:55050591-55051046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:62286274-62286729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:62353188-62353621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:63940500-63940935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr10:67443383-67442957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr10:53674545-53674992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr10:15867958-15868421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr10:23056356-23055922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr10:35905108-35904678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr10:41737031-41737457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr10:23912774-23912344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr10:55733877-55733442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr10:721021-721465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr10:64182173-64182622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:1423554-1424011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:5600272-5599820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:9576316-9575871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:14817441-14816983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:22509467-22508998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:22616921-22616463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:32774837-32775285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:39387181-39387627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:46195516-46195959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr10:57461088-57461531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
221, 17
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr10:30460367-30460849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr10:16598411-16598874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr10:25935965-25936423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr10:34607280-34607749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr10:15818074-15817609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:5890048-5889570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:10468701-10469151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:24277023-24276544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:25699388-25699853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
233, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:37818837-37818366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:68183208-68182774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr10:69935055-69934596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-470
               

               
Cow position:
               
chr10:34655389-34654924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-471
               

               
Cow position:
               
chr10:6719624-6720097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-471
               

               
Cow position:
               
chr10:56080451-56079973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-472
               

               
Cow position:
               
chr10:52296220-52296687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr10:35901058-35901524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
6-490
               

               
Cow position:
               
chr10:40106839-40107315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr10:51306049-51306547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
7-122
               

               
Cow position:
               
chr10:26967962-26967849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
7-159
               

               
Cow position:
               
chr10:60237390-60237244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
7-165
               

               
Cow position:
               
chr10:9526354-9526196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
7-192
               

               
Cow position:
               
chr10:6345795-6345986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr10:51779306-51779099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr10:41255711-41255924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr10:20735430-20735642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr10:30456132-30455909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr10:11032774-11032553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr10:15619084-15618859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr10:42453861-42454126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr10:37528882-37528603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr10:43451196-43450892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr10:130943-131266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr10:15318609-15318927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr10:43314417-43314738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr10:65424188-65423854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr10:24763202-24763558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
7-362
               

               
Cow position:
               
chr10:41941857-41941481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr10:2449075-2449434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-381
               

               
Cow position:
               
chr10:34175273-34174874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr10:11212835-11213222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
7-442
               

               
Cow position:
               
chr10:2703946-2704346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
7-442
               

               
Cow position:
               
chr10:51288978-51289406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-443
               

               
Cow position:
               
chr10:10985769-10985349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:5151069-5151516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:9287790-9288192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
220, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:10148369-10148814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:17073629-17073203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:21657144-21657576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:34661593-34661168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:41408010-41408430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:57786060-57786500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr10:64286073-64285636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr10:5543527-5543069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
7-467
               

               
Cow position:
               
chr10:31534474-31534925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 11
               

               
Conread position:
               
8-193
               

               
Cow position:
               
chr10:16985963-16986148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr10:25475303-25475496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
8-207
               

               
Cow position:
               
chr10:30746128-30746323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-209
               

               
Cow position:
               
chr10:39646380-39646178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr10:65130938-65130732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr10:6915273-6915071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr10:35026204-35026428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr10:5607367-5607641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr10:14098598-14098295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr10:31466468-31466792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr10:29360632-29360970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr10:54476836-54477158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr10:24744852-24745183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
8-356
               

               
Cow position:
               
chr10:53935015-53934676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr10:31374382-31373982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr10:59664240-59663851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr10:35802645-35802220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
8-438
               

               
Cow position:
               
chr10:38133759-38133322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
8-440
               

               
Cow position:
               
chr10:43487435-43487876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-442
               

               
Cow position:
               
chr10:6489590-6490040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-443
               

               
Cow position:
               
chr10:48462617-48462184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr10:25509423-25509844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr10:30352568-30353014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr10:39227881-39228327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 10
               

               
Conread position:
               
8-448
               

               
Cow position:
               
chr10:29102600-29102175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr10:54730736-54731199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr10:23506763-23506304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr10:35862506-35862051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr10:57405212-57404987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr10:64878270-64878040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr10:53336678-53336365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr10:12314894-12315253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
210, 9
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr10:47542816-47543216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr10:11080683-11081134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr10:67627260-67626839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 9
               

               
Conread position:
               
9-443
               

               
Cow position:
               
chr10:39398793-39398356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
9-444
               

               
Cow position:
               
chr10:30523331-30522900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
9-444
               

               
Cow position:
               
chr10:37014364-37014800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
9-451
               

               
Cow position:
               
chr10:26577275-26577726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
9-468
               

               
Cow position:
               
chr10:4310913-4311352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr10:25045956-25045722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr10:57457058-57457332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
10-442
               

               
Cow position:
               
chr10:61588535-61588095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 8
               

               
Conread position:
               
10-458
               

               
Cow position:
               
chr10:19372602-19372157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
13-235
               

               
Cow position:
               
chr10:52589964-52589741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
13-255
               

               
Cow position:
               
chr10:58556924-58557164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr10:2304647-2304349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 5
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr10:37042252-37042567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
13-331
               

               
Cow position:
               
chr10:10124073-10124394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 5
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr10:24133091-24132765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
13-376
               

               
Cow position:
               
chr10:49456348-49455996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
212, 13
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr10:8169988-8170218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
15-444
               

               
Cow position:
               
chr10:35246215-35245789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 197
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr10:59152131-59151759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr10:59141161-59141362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
19-449
               

               
Cow position:
               
chr10:54962990-54962549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
20-186
               

               
Cow position:
               
chr10:35715975-35715807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr10:47493470-47493275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
20-215
               

               
Cow position:
               
chr10:20811910-20812109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
20-225
               

               
Cow position:
               
chr10:46801270-46801065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
20-234
               

               
Cow position:
               
chr10:8077417-8077195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr10:6516451-6516169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr10:19655644-19655937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr10:43288134-43287830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
20-331
               

               
Cow position:
               
chr10:15462233-15462543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
20-360
               

               
Cow position:
               
chr10:17863319-17863666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 6
               

               
Conread position:
               
20-378
               

               
Cow position:
               
chr10:59844189-59843811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
20-388
               

               
Cow position:
               
chr10:668618-668975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
20-396
               

               
Cow position:
               
chr10:52113930-52113556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
20-405
               

               
Cow position:
               
chr10:63627948-63628312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr10:15889223-15889646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr10:31527729-31528131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
197, 6
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr10:40421110-40420691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr10:44771391-44771811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 6
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr10:54936377-54935963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
20-446
               

               
Cow position:
               
chr10:42312643-42313073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 6
               

               
Conread position:
               
20-469
               

               
Cow position:
               
chr10:57059546-57059089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
20-470
               

               
Cow position:
               
chr10:40147900-40147441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
21-198
               

               
Cow position:
               
chr10:23376727-23376549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
21-442
               

               
Cow position:
               
chr10:59571633-59572054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
22-268
               

               
Cow position:
               
chr10:69567590-69567838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
22-404
               

               
Cow position:
               
chr10:16740322-16739941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
22-423
               

               
Cow position:
               
chr10:63276127-63276537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
22-480
               

               
Cow position:
               
chr10:2613118-2613570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 31
               

               
Conread position:
               
23-419
               

               
Cow position:
               
chr10:50609274-50609692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
24-320
               

               
Cow position:
               
chr10:69544593-69544306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
24-444
               

               
Cow position:
               
chr10:38370724-38370288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
24-459
               

               
Cow position:
               
chr10:40164193-40163755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
25-184
               

               
Cow position:
               
chr10:5113325-5113490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr10:31812678-31812511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr10:24153259-24153062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr10:65803347-65803119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
25-325
               

               
Cow position:
               
chr10:29069895-29070202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
25-336
               

               
Cow position:
               
chr10:59588428-59588119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
25-342
               

               
Cow position:
               
chr10:20997537-20997225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
25-372
               

               
Cow position:
               
chr10:48741418-48741067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
25-376
               

               
Cow position:
               
chr10:28776108-28776448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr10:3998644-3999009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
25-382
               

               
Cow position:
               
chr10:28105333-28104977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-388
               

               
Cow position:
               
chr10:41803157-41802785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-396
               

               
Cow position:
               
chr10:24732049-24732420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-439
               

               
Cow position:
               
chr10:6505100-6505511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr10:20372392-20371968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr10:28176654-28176238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr10:39875406-39874977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr10:65071050-65071486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-458
               

               
Cow position:
               
chr10:18041924-18042363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
25-465
               

               
Cow position:
               
chr10:12392864-12392421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr10:58690644-58690836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr10:37822987-37822744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
26-279
               

               
Cow position:
               
chr10:52029362-52029625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-293
               

               
Cow position:
               
chr10:17584289-17584023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr10:67020367-67020663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
26-338
               

               
Cow position:
               
chr10:21461981-21462301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr10:36896145-36896466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
26-440
               

               
Cow position:
               
chr10:35791673-35792088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr10:21422412-21422001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr10:24313149-24312728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr10:46150625-46151032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr10:48317216-48316780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
26-454
               

               
Cow position:
               
chr10:28395552-28395135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr10:48257539-48257097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
27-267
               

               
Cow position:
               
chr10:9445272-9445031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr10:31266587-31266342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
27-317
               

               
Cow position:
               
chr10:22520425-22520124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr10:804936-805235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
27-331
               

               
Cow position:
               
chr10:6491032-6490713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
27-389
               

               
Cow position:
               
chr10:22567697-22567340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr10:25569-25970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr10:21082136-21082534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr10:23576284-23576704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr10:24561246-24560825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr10:61510933-61511348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
27-458
               

               
Cow position:
               
chr10:32417106-32417522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
192, 12
               

               
Conread position:
               
27-468
               

               
Cow position:
               
chr10:51944103-51944545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
28-177
               

               
Cow position:
               
chr10:49948333-49948177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chr10:19401771-19401945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr10:17982925-17983134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr10:24022538-24022174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
28-467
               

               
Cow position:
               
chr10:31027901-31027452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
29-193
               

               
Cow position:
               
chr10:32928510-32928675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr10:29816332-29816539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr10:34300250-34300454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr10:50200456-50200697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
29-319
               

               
Cow position:
               
chr10:61839343-61839629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
29-322
               

               
Cow position:
               
chr10:8923017-8923322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr10:38518887-38518566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
29-345
               

               
Cow position:
               
chr10:24308159-24307858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
271, 10
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr10:29920089-29919739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
29-383
               

               
Cow position:
               
chr10:27828082-27828424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 24
               

               
Conread position:
               
29-388
               

               
Cow position:
               
chr10:2849097-2849458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr10:22341308-22341738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr10:50183304-50182890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr10:56732789-56733192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr10:60960683-60961110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
29-467
               

               
Cow position:
               
chr10:64041826-64042271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
29-468
               

               
Cow position:
               
chr10:36489762-36490204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
29-469
               

               
Cow position:
               
chr10:2462735-2462290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
30-352
               

               
Cow position:
               
chr10:10043350-10043035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
30-368
               

               
Cow position:
               
chr10:37668416-37668068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
30-444
               

               
Cow position:
               
chr10:10048426-10048841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
30-444
               

               
Cow position:
               
chr10:22390333-22390760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
31-387
               

               
Cow position:
               
chr10:29251907-29252272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
33-417
               

               
Cow position:
               
chr10:42636971-42637372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
33-458
               

               
Cow position:
               
chr10:54948384-54947966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
36-193
               

               
Cow position:
               
chr10:9586768-9586609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
36-323
               

               
Cow position:
               
chr10:10963736-10964031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 168
               

               
Conread position:
               
36-448
               

               
Cow position:
               
chr10:47773484-47773893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
39-388
               

               
Cow position:
               
chr10:22396008-22396362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
39-469
               

               
Cow position:
               
chr10:35868248-35867827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
40-316
               

               
Cow position:
               
chr10:32030070-32029796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 13
               

               
Conread position:
               
40-388
               

               
Cow position:
               
chr10:31779514-31779163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
41-225
               

               
Cow position:
               
chr10:37709282-37709095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
41-262
               

               
Cow position:
               
chr10:6986204-6986430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr10:29589085-29588750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
42-355
               

               
Cow position:
               
chr10:22321275-22321598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr10:24755668-24755474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
43-270
               

               
Cow position:
               
chr10:48388510-48388280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
44-464
               

               
Cow position:
               
chr10:62219580-62220023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 307
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chr10:25882186-25882402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr10:18229960-18229718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
49-367
               

               
Cow position:
               
chr10:60722382-60722074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
49-368
               

               
Cow position:
               
chr10:29279204-29279534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr10:2853884-2853521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
49-444
               

               
Cow position:
               
chr10:25149665-25150050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
49-478
               

               
Cow position:
               
chr10:3275768-3276168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
399, 55
               

               
Conread position:
               
50-469
               

               
Cow position:
               
chr10:16414823-16414388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr10:45379242-45378837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 291
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr10:50559161-50558766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 212
               

               
Conread position:
               
53-458
               

               
Cow position:
               
chr10:28152617-28152215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
53-464
               

               
Cow position:
               
chr10:28840719-28841137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
53-469
               

               
Cow position:
               
chr10:37415551-37415971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 324
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr10:38512941-38513115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
54-388
               

               
Cow position:
               
chr10:24375313-24375653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr10:51862300-51861985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
55-444
               

               
Cow position:
               
chr10:6435827-6436221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
81, 319
               

               
Conread position:
               
56-341
               

               
Cow position:
               
chr10:47412339-47412045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 246
               

               
Conread position:
               
59-218
               

               
Cow position:
               
chr10:2708150-2708312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
59-237
               

               
Cow position:
               
chr10:18154060-18153873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
59-317
               

               
Cow position:
               
chr10:48683485-48683224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
59-411
               

               
Cow position:
               
chr10:37913413-37913049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
59-443
               

               
Cow position:
               
chr10:43531027-43531430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
60-220
               

               
Cow position:
               
chr10:15874666-15874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
60-423
               

               
Cow position:
               
chr10:6665773-6665423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
61-193
               

               
Cow position:
               
chr10:30106328-30106198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr10:62956087-62956354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 220
               

               
Conread position:
               
61-322
               

               
Cow position:
               
chr10:47797916-47798185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
61-331
               

               
Cow position:
               
chr10:24744322-24744597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
61-331
               

               
Cow position:
               
chr10:46493229-46492943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
61-448
               

               
Cow position:
               
chr10:57142437-57142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
61-469
               

               
Cow position:
               
chr10:65550641-65551068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 277
               

               
Conread position:
               
62-320
               

               
Cow position:
               
chr10:13163672-13163408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr10:33733093-33732797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 251
               

               
Conread position:
               
63-438
               

               
Cow position:
               
chr10:66194528-66194144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr10:7816885-7817278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
65-230
               

               
Cow position:
               
chr10:32174506-32174679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
65-355
               

               
Cow position:
               
chr10:3362397-3362702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
65-444
               

               
Cow position:
               
chr10:1996887-1996510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 178
               

               
Conread position:
               
68-381
               

               
Cow position:
               
chr10:33067788-33067476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
71-331
               

               
Cow position:
               
chr10:59164312-59164051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 212
               

               
Conread position:
               
71-441
               

               
Cow position:
               
chr10:45871297-45871679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 168
               

               
Conread position:
               
72-444
               

               
Cow position:
               
chr10:44730696-44730310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
74-331
               

               
Cow position:
               
chr10:41254775-41254522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
74-444
               

               
Cow position:
               
chr10:17022770-17022405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
77-324
               

               
Cow position:
               
chr10:39304062-39303802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
77-330
               

               
Cow position:
               
chr10:24780979-24781239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
77-341
               

               
Cow position:
               
chr10:50135012-50134742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
80-331
               

               
Cow position:
               
chr10:37644868-37645111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
82-467
               

               
Cow position:
               
chr10:19191580-19191940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
86-459
               

               
Cow position:
               
chr10:12486066-12486423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
87-320
               

               
Cow position:
               
chr10:11623726-11623956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
87-387
               

               
Cow position:
               
chr10:35779100-35778796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
87-431
               

               
Cow position:
               
chr10:11576573-11576923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr10:40737804-40738153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr10:8411801-8412148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr10:35653464-35653832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
87-448
               

               
Cow position:
               
chr10:10120000-10120360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
87-464
               

               
Cow position:
               
chr10:66199900-66199521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
90-457
               

               
Cow position:
               
chr10:68926961-68927322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
92-322
               

               
Cow position:
               
chr10:45678822-45679060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
92-331
               

               
Cow position:
               
chr10:22434114-22433858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr10:51942596-51942877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
92-379
               

               
Cow position:
               
chr10:47651108-47651398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
94-341
               

               
Cow position:
               
chr10:42893157-42892909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
94-444
               

               
Cow position:
               
chr10:66003683-66004041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
95-462
               

               
Cow position:
               
chr10:48513275-48512897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 259
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr10:747276-747610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
100-381
               

               
Cow position:
               
chr10:67288114-67288391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
100-444
               

               
Cow position:
               
chr10:11463853-11463496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
100-458
               

               
Cow position:
               
chr10:63883766-63884122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
101-458
               

               
Cow position:
               
chr10:52695914-52695545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 187
               

               
Conread position:
               
101-467
               

               
Cow position:
               
chr10:4184006-4184390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr10:55849172-55849421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr10:24756232-24756572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
103-444
               

               
Cow position:
               
chr10:4109409-4109742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
103-444
               

               
Cow position:
               
chr10:47690210-47690561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
108-444
               

               
Cow position:
               
chr10:28178987-28178652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
109-341
               

               
Cow position:
               
chr10:5264643-5264872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
110-421
               

               
Cow position:
               
chr10:37295839-37295530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 121
               

               
Conread position:
               
112-444
               

               
Cow position:
               
chr10:60237268-60236936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr10:35856523-35856338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr10:55622019-55621762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
113-380
               

               
Cow position:
               
chr10:4164094-4164369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr10:38240920-38241242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr10:44764673-44764327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr10:51804200-51803883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
120-458
               

               
Cow position:
               
chr10:38376818-38376496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr10:30613673-30613915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
121-444
               

               
Cow position:
               
chr10:10219480-10219811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr10:25260097-25260290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
126-337
               

               
Cow position:
               
chr10:31116527-31116733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
128-427
               

               
Cow position:
               
chr10:42123751-42123442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 212
               

               
Conread position:
               
130-266
               

               
Cow position:
               
chr10:56392430-56392292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 116
               

               
Conread position:
               
130-381
               

               
Cow position:
               
chr10:6543568-6543827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 162
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr10:11255921-11256231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 228
               

               
Conread position:
               
130-469
               

               
Cow position:
               
chr10:16986175-16986524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
131-444
               

               
Cow position:
               
chr10:6384382-6384689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr10:2202277-2202054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
133-443
               

               
Cow position:
               
chr10:30369962-30369664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
103, 40
               

               
Conread position:
               
133-447
               

               
Cow position:
               
chr10:21923672-21923350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
134-440
               

               
Cow position:
               
chr10:61922289-61921983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
135-443
               

               
Cow position:
               
chr10:38430714-38430404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr10:69997950-69997739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
138-444
               

               
Cow position:
               
chr10:15249191-15248875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr10:22633769-22633537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
142-383
               

               
Cow position:
               
chr10:33117093-33116847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
143-381
               

               
Cow position:
               
chr10:53075980-53076214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr10:47724810-47725059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr10:27119108-27118799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr10:58451513-58451217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
143-469
               

               
Cow position:
               
chr10:48679405-48679077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
144-458
               

               
Cow position:
               
chr10:6663886-6664209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 238
               

               
Conread position:
               
146-441
               

               
Cow position:
               
chr10:15309535-15309248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
148-444
               

               
Cow position:
               
chr10:36531868-36531561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
149-444
               

               
Cow position:
               
chr10:37068548-37068257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
150-468
               

               
Cow position:
               
chr10:25913929-25913589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
152-444
               

               
Cow position:
               
chr10:45624282-45624012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
152-444
               

               
Cow position:
               
chr10:46327556-46327854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
77, 220
               

               
Conread position:
               
152-458
               

               
Cow position:
               
chr10:48407003-48407318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
152-464
               

               
Cow position:
               
chr10:39123997-39124321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
153-443
               

               
Cow position:
               
chr10:38356236-38355939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
154-443
               

               
Cow position:
               
chr10:36400174-36399885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
155-444
               

               
Cow position:
               
chr10:46849739-46850031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
155-444
               

               
Cow position:
               
chr10:52881749-52881453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 194
               

               
Conread position:
               
155-468
               

               
Cow position:
               
chr10:10750382-10750058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
73, 275
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr10:4151419-4151718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr10:7383738-7383453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr10:31005146-31004851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
157-458
               

               
Cow position:
               
chr10:8449371-8449695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
158-468
               

               
Cow position:
               
chr10:60446606-60446920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 221
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr10:33881906-33881596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
163-458
               

               
Cow position:
               
chr10:29328508-29328223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
164-454
               

               
Cow position:
               
chr10:29380082-29379797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
169-444
               

               
Cow position:
               
chr10:61510056-61509783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 197
               

               
Conread position:
               
173-355
               

               
Cow position:
               
chr10:6198907-6199094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr10:49947989-49947771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
174-444
               

               
Cow position:
               
chr10:22888926-22888654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 149
               

               
Conread position:
               
177-442
               

               
Cow position:
               
chr10:63484534-63484799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr10:30216815-30216537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
178-424
               

               
Cow position:
               
chr10:33084543-33084291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
178-444
               

               
Cow position:
               
chr10:3364289-3364021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
178-467
               

               
Cow position:
               
chr10:55396084-55395792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
180-458
               

               
Cow position:
               
chr10:33573345-33573068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
181-396
               

               
Cow position:
               
chr10:41760426-41760204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
185-469
               

               
Cow position:
               
chr10:23311114-23310839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
190-458
               

               
Cow position:
               
chr10:10137773-10138039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr10:34646541-34646308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
192-444
               

               
Cow position:
               
chr10:23346396-23346143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
192-444
               

               
Cow position:
               
chr10:60491351-60491099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
193-368
               

               
Cow position:
               
chr10:53405384-53405561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
197-379
               

               
Cow position:
               
chr10:52827677-52827499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
197-458
               

               
Cow position:
               
chr10:46886081-46886322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
197-467
               

               
Cow position:
               
chr10:58044218-58043943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 256
               

               
Conread position:
               
197-470
               

               
Cow position:
               
chr10:23390404-23390130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr10:41676495-41676251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
202-448
               

               
Cow position:
               
chr10:30746599-30746849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
203-470
               

               
Cow position:
               
chr10:31803564-31803286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
205-442
               

               
Cow position:
               
chr10:51727497-51727264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
214-444
               

               
Cow position:
               
chr10:60697688-60697465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
217-444
               

               
Cow position:
               
chr10:11047268-11047041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
218-444
               

               
Cow position:
               
chr10:10027515-10027738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
218-444
               

               
Cow position:
               
chr10:43586346-43586120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
219, 139
               

               
Conread position:
               
218-468
               

               
Cow position:
               
chr10:25822304-25822069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr10:37426194-37425953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
202, 147
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr10:39622414-39622188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr10:32080216-32080446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
220-444
               

               
Cow position:
               
chr10:17149820-17150036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr10:6242569-6242350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
221-436
               

               
Cow position:
               
chr10:47182625-47182410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
221-444
               

               
Cow position:
               
chr10:55600215-55599990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 122
               

               
Conread position:
               
222-412
               

               
Cow position:
               
chr10:40744059-40744240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
222-443
               

               
Cow position:
               
chr10:30929947-30929722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 175
               

               
Conread position:
               
223-468
               

               
Cow position:
               
chr10:20485619-20485370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
224-368
               

               
Cow position:
               
chr10:37768249-37768391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
227-389
               

               
Cow position:
               
chr10:2694912-2695069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
227-484
               

               
Cow position:
               
chr10:38995176-38995441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
232-468
               

               
Cow position:
               
chr10:10152962-10153191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 101
               

               
Conread position:
               
233-459
               

               
Cow position:
               
chr10:49634020-49634246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
215, 137
               

               
Conread position:
               
240-444
               

               
Cow position:
               
chr10:443543-443736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
243-444
               

               
Cow position:
               
chr10:16830423-16830220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
244-476
               

               
Cow position:
               
chr10:38205746-38205520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
204, 113
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr10:11112589-11112784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
254-478
               

               
Cow position:
               
chr10:27178470-27178683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 41
               

               
Conread position:
               
258-443
               

               
Cow position:
               
chr10:10829021-10829204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
258-444
               

               
Cow position:
               
chr10:55043664-55043476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
259-442
               

               
Cow position:
               
chr10:34903458-34903635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
261-442
               

               
Cow position:
               
chr10:49862451-49862625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr10:14541852-14542036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 96
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr10:46799123-46799301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr10:59417254-59417074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
261-448
               

               
Cow position:
               
chr10:17077756-17077573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
261-458
               

               
Cow position:
               
chr10:53564139-53563940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
261-458
               

               
Cow position:
               
chr10:58149188-58148992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
261-469
               

               
Cow position:
               
chr10:24971345-24971141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
185, 119
               

               
Conread position:
               
261-480
               

               
Cow position:
               
chr10:65904227-65904443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
262-459
               

               
Cow position:
               
chr10:37508165-37507971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
263-443
               

               
Cow position:
               
chr10:19679081-19679268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
263-444
               

               
Cow position:
               
chr10:5784271-5784088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
263-444
               

               
Cow position:
               
chr10:43460069-43459890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr10:40998839-40999066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
264-468
               

               
Cow position:
               
chr10:2985088-2984881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
266-448
               

               
Cow position:
               
chr10:14188624-14188443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
172, 67
               

               
Conread position:
               
278-444
               

               
Cow position:
               
chr10:4329999-4329829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
280-444
               

               
Cow position:
               
chr10:57095200-57095041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
283-459
               

               
Cow position:
               
chr10:58651187-58651012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
284-443
               

               
Cow position:
               
chr10:18751471-18751313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
284-444
               

               
Cow position:
               
chr10:16641927-16641766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
284-464
               

               
Cow position:
               
chr10:7089351-7089527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
285-442
               

               
Cow position:
               
chr10:27136683-27136523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
285-464
               

               
Cow position:
               
chr10:3985895-3986074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
288-444
               

               
Cow position:
               
chr10:61039127-61039283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
292-444
               

               
Cow position:
               
chr10:47429838-47429987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
292-468
               

               
Cow position:
               
chr10:14668410-14668586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-467
               

               
Cow position:
               
chr10:32829243-32829418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
301-444
               

               
Cow position:
               
chr10:25475554-25475696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
304-426
               

               
Cow position:
               
chr10:31202400-31202521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
304-444
               

               
Cow position:
               
chr10:10104805-10104943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               
Show alignments to all cow chromosomes.