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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-93B09.5
        

               
Conread position:
               
1-212
               

               
Cow position:
               
chr17:5228926-5229135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr17:8544093-8544471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr17:12929760-12929285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr17:35372033-35371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr17:29080350-29080764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
218, 8
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr17:40741431-40741899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
5-133
               

               
Cow position:
               
chr17:11912914-11912789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr17:3781830-3782157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr17:39735972-39736326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr17:13143904-13143550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr17:40421455-40421870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr17:39771182-39771628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr17:2730011-2729886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-142
               

               
Cow position:
               
chr17:23517380-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-156
               

               
Cow position:
               
chr17:40406091-40406244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-170
               

               
Cow position:
               
chr17:8644824-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-176
               

               
Cow position:
               
chr17:21039065-21039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr17:16117642-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr17:1359010-1358828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr17:25078206-25078027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr17:24876925-24877121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr17:27679457-27679258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr17:32554236-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr17:3498877-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr17:25168100-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr17:38116199-38116403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr17:31280-31490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr17:10220268-10220469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr17:29040679-29040472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr17:30999563-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr17:5041889-5041687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr17:17452815-17452610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr17:21031575-21031782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr17:27667407-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr17:27162439-27162654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr17:32651403-32651625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr17:42347434-42347221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr17:23880041-23879821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr17:27819089-27819309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr17:30204442-30204666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr17:40642303-40642077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr17:44924388-44924178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr17:2079548-2079770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr17:12216290-12216063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr17:8926433-8926207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr17:23337227-23337006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr17:21363195-21363419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr17:31232143-31231917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:10649636-10649857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:11056588-11056357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:16307167-16307393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:21425750-21425982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:25755571-25755808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr17:31263515-31263282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr17:4612290-4612062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr17:20361650-20361881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr17:3182797-3182568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr17:5896123-5895887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr17:21680555-21680787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr17:5745456-5745226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr17:5255589-5255321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr17:24761436-24761174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr17:39012505-39012781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
6-275
               

               
Cow position:
               
chr17:1295784-1295511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr17:9778038-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr17:3306655-3306931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr17:5733661-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr17:20839771-20839488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr17:2034332-2034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr17:14848736-14848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr17:20870306-20870002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr17:2584483-2584806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr17:5224190-5224506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr17:37579192-37578874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr17:39790480-39790804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr17:4225704-4225391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr17:20083725-20083412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr17:21620501-21620835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr17:34316921-34316604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr17:11172828-11172501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr17:3683870-3683554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr17:26084822-26085140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr17:7697843-7698173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr17:9565096-9565427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr17:11171583-11171918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr17:1568389-1568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr17:3503367-3503718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr17:2662196-2662565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr17:27142543-27142885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr17:30539462-30539119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr17:43141933-43141556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr17:24580512-24580138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr17:8079104-8079470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr17:41029739-41030095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr17:30718632-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr17:9746308-9746676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr17:1410454-1410070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr17:12220151-12219772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr17:27047950-27048320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr17:25796553-25796167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr17:923667-924043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr17:18592226-18592617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr17:23245999-23246372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr17:24553791-24554169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr17:9117430-9117817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr17:38832829-38833218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr17:8690653-8690277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr17:17405925-17406328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr17:18109299-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr17:25097250-25097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr17:30665061-30665474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr17:25189067-25189498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr17:17951030-17951444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr17:23063498-23063933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr17:18472966-18473379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-435
               

               
Cow position:
               
chr17:20033129-20032688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr17:14026128-14025683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr17:24587405-24587848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr17:12325959-12325543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr17:21959892-21959456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr17:27795435-27795882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr17:29292582-29292163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr17:36331179-36330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr17:20780299-20780753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr17:24004182-24004601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr17:32472004-32471560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:5280855-5280421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:6155828-6156262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:6423548-6423983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:7810952-7810518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:10528954-10528501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:11216096-11215664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 13
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:11381933-11381496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:11618367-11618816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:11664801-11664348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:12289628-12289181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:13244239-13243825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
272, 10
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:15103101-15102660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:16446642-16446197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:17222131-17222573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:17410085-17410529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:18201561-18201990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:18490320-18490762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:18720661-18720223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:20800603-20801043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:21004044-21003602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:26818665-26818243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:32027675-32027218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:32419331-32418888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:32989280-32989702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:33288867-33288429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:33933950-33933519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:34948427-34948866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:37163740-37163316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:38614743-38615192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:40331556-40332008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr17:40771617-40772059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr17:14050405-14049973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr17:23101424-23100989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr17:33792969-33793390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
6-449
               

               
Cow position:
               
chr17:30529749-30529313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr17:21115161-21114714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr17:26230727-26231212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr17:5000787-5000357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr17:5767701-5768139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr17:21973344-21972883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr17:24787234-24786782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr17:28285239-28284792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr17:1783819-1783383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr17:24883777-24883326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr17:20022730-20022269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr17:5423284-5422828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr17:11102007-11101567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr17:41290230-41289793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr17:6936877-6936421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr17:15684292-15684756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr17:30713140-30713597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr17:42419520-42419964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr17:14033860-14033389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr17:24973737-24974195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr17:25815395-25815848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-472
               

               
Cow position:
               
chr17:20157404-20157866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-473
               

               
Cow position:
               
chr17:17059227-17059673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 12
               

               
Conread position:
               
6-476
               

               
Cow position:
               
chr17:27274349-27274830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr17:32993826-32993366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-484
               

               
Cow position:
               
chr17:20234014-20234465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
7-192
               

               
Cow position:
               
chr17:21710293-21710478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr17:7559883-7559671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr17:21017582-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr17:1275307-1275632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr17:28539824-28540147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr17:7760675-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr17:11156705-11156334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-381
               

               
Cow position:
               
chr17:1061274-1060878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-436
               

               
Cow position:
               
chr17:11281319-11280868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr17:11832348-11831889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr17:21739096-21738636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr17:26514503-26514944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr17:36275145-36275565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 11
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr17:20090833-20090398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr17:7132667-7132180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr17:11296423-11296891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
7-471
               

               
Cow position:
               
chr17:15664457-15664932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr17:13922261-13922744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr17:7041156-7040952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr17:3843276-3843492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr17:20835382-20835655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
8-321
               

               
Cow position:
               
chr17:25542023-25541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr17:15300081-15299773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
244, 10
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr17:21755652-21755327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr17:31231325-31231014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr17:8279918-8279592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-374
               

               
Cow position:
               
chr17:26764803-26765183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr17:35126503-35126885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr17:29472264-29472686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
8-451
               

               
Cow position:
               
chr17:32138611-32138180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 11
               

               
Conread position:
               
8-467
               

               
Cow position:
               
chr17:9853775-9854232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr17:33291019-33290802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr17:966949-966694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr17:27765071-27765327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
214, 9
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr17:242425-242693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
9-443
               

               
Cow position:
               
chr17:11361973-11362404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
9-444
               

               
Cow position:
               
chr17:13940532-13940089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
9-458
               

               
Cow position:
               
chr17:34079308-34078863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr17:26183013-26183237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr17:38646859-38647170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr17:25032681-25032329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
10-444
               

               
Cow position:
               
chr17:10446707-10447142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
10-444
               

               
Cow position:
               
chr17:25128558-25128125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
10-458
               

               
Cow position:
               
chr17:20848322-20848768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
10-469
               

               
Cow position:
               
chr17:20993248-20992782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr17:20912690-20912896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr17:21243994-21243665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr17:29715394-29714971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
12-323
               

               
Cow position:
               
chr17:18860927-18860613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 6
               

               
Conread position:
               
12-443
               

               
Cow position:
               
chr17:1035811-1035366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
12-469
               

               
Cow position:
               
chr17:27429371-27429810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
13-225
               

               
Cow position:
               
chr17:15067829-15067622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 5
               

               
Conread position:
               
13-331
               

               
Cow position:
               
chr17:3152530-3152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
13-384
               

               
Cow position:
               
chr17:21335904-21335517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
13-468
               

               
Cow position:
               
chr17:5898730-5898272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
14-445
               

               
Cow position:
               
chr17:5514553-5514987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
16-198
               

               
Cow position:
               
chr17:21412451-21412267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
16-444
               

               
Cow position:
               
chr17:21434933-21434499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
17-444
               

               
Cow position:
               
chr17:1256707-1256269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr17:18824588-18824902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
19-444
               

               
Cow position:
               
chr17:11278234-11277798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
20-223
               

               
Cow position:
               
chr17:4606770-4606960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr17:19455503-19455303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr17:3471221-3471489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
115, 6
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr17:5006691-5006340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr17:18495711-18495324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
20-421
               

               
Cow position:
               
chr17:9697905-9697474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
20-439
               

               
Cow position:
               
chr17:2810421-2810857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
20-442
               

               
Cow position:
               
chr17:29356420-29356016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr17:11397466-11397896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
20-454
               

               
Cow position:
               
chr17:6566268-6566724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
20-477
               

               
Cow position:
               
chr17:31481246-31480770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr17:35990894-35991116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr17:24490323-24490657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
23-228
               

               
Cow position:
               
chr17:4436431-4436224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr17:35311224-35311432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr17:44232917-44232709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
24-426
               

               
Cow position:
               
chr17:24148981-24149398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
24-434
               

               
Cow position:
               
chr17:12108607-12109027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr17:33999240-33999040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr17:27305963-27306172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr17:41393909-41393698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr17:41400166-41399956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
25-293
               

               
Cow position:
               
chr17:6624062-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
25-301
               

               
Cow position:
               
chr17:15333907-15333624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
25-311
               

               
Cow position:
               
chr17:33271875-33271587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
25-338
               

               
Cow position:
               
chr17:21628286-21628600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr17:9911567-9911924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr17:21599878-21599451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr17:32279103-32278675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr17:33052667-33053083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr17:40312525-40312928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
25-448
               

               
Cow position:
               
chr17:24824056-24824484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 28
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr17:25141265-25141450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
26-225
               

               
Cow position:
               
chr17:26881532-26881328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr17:32950077-32950289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr17:21207330-21207080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
26-309
               

               
Cow position:
               
chr17:7648025-7648306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr17:37482274-37481952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-338
               

               
Cow position:
               
chr17:17060877-17060559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr17:41892263-41891899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr17:14249218-14248811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr17:11839503-11839952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr17:20072270-20071874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
346, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr17:22563988-22564407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr17:25999921-26000348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr17:33275941-33275530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
27-180
               

               
Cow position:
               
chr17:5695142-5694988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
27-184
               

               
Cow position:
               
chr17:43527783-43527942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
27-208
               

               
Cow position:
               
chr17:3518446-3518264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr17:4472998-4472812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr17:5246701-5246897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
27-235
               

               
Cow position:
               
chr17:26515930-26515720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
27-265
               

               
Cow position:
               
chr17:21312999-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr17:21697538-21697786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
27-301
               

               
Cow position:
               
chr17:12059285-12059007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr17:5688542-5688268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
27-320
               

               
Cow position:
               
chr17:34595745-34596045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
27-325
               

               
Cow position:
               
chr17:20889180-20889481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
27-396
               

               
Cow position:
               
chr17:40289198-40288819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
27-468
               

               
Cow position:
               
chr17:12447593-12447152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
28-322
               

               
Cow position:
               
chr17:37480186-37479895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
28-362
               

               
Cow position:
               
chr17:21495182-21495515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr17:24077209-24077598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
28-439
               

               
Cow position:
               
chr17:4601741-4601337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
28-456
               

               
Cow position:
               
chr17:25901004-25901451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr17:24549977-24550182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr17:553163-552824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr17:43717505-43717111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
30-443
               

               
Cow position:
               
chr17:24773492-24773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr17:22775192-22775598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
31-458
               

               
Cow position:
               
chr17:12536658-12536231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
33-230
               

               
Cow position:
               
chr17:22781499-22781703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
33-380
               

               
Cow position:
               
chr17:20126426-20126761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
33-431
               

               
Cow position:
               
chr17:3202589-3202195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
34-162
               

               
Cow position:
               
chr17:20269415-20269544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
36-388
               

               
Cow position:
               
chr17:15340923-15340580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
36-408
               

               
Cow position:
               
chr17:20932143-20932526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
39-208
               

               
Cow position:
               
chr17:36203672-36203501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
39-368
               

               
Cow position:
               
chr17:22806723-22806390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
39-443
               

               
Cow position:
               
chr17:1063007-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 14
               

               
Conread position:
               
39-444
               

               
Cow position:
               
chr17:36454946-36454549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
39-458
               

               
Cow position:
               
chr17:3577356-3577771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
40-226
               

               
Cow position:
               
chr17:33926306-33926120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
40-382
               

               
Cow position:
               
chr17:265475-265838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
41-276
               

               
Cow position:
               
chr17:34208000-34207754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
41-396
               

               
Cow position:
               
chr17:29157238-29157596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
41-466
               

               
Cow position:
               
chr17:908566-908988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
42-249
               

               
Cow position:
               
chr17:3442847-3442644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
46-448
               

               
Cow position:
               
chr17:12306572-12306167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
49-270
               

               
Cow position:
               
chr17:36268223-36268436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
49-368
               

               
Cow position:
               
chr17:12590990-12591327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
49-374
               

               
Cow position:
               
chr17:20990367-20990030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr17:32273857-32273515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
49-427
               

               
Cow position:
               
chr17:8837122-8836736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 250
               

               
Conread position:
               
49-444
               

               
Cow position:
               
chr17:10459109-10458705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
49-468
               

               
Cow position:
               
chr17:25611920-25612337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
50-458
               

               
Cow position:
               
chr17:1634654-1634249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
51-325
               

               
Cow position:
               
chr17:21918045-21917763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
53-381
               

               
Cow position:
               
chr17:24821697-24822028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr17:22032863-22032459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 184
               

               
Conread position:
               
54-463
               

               
Cow position:
               
chr17:30359310-30359706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
55-297
               

               
Cow position:
               
chr17:38363141-38362901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
56-286
               

               
Cow position:
               
chr17:10510828-10510586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
59-371
               

               
Cow position:
               
chr17:979316-979012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
59-442
               

               
Cow position:
               
chr17:44147139-44146746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 283
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr17:4106149-4105754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr17:4121885-4121489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
60-444
               

               
Cow position:
               
chr17:1562936-1562562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
60-444
               

               
Cow position:
               
chr17:7142702-7143086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 146
               

               
Conread position:
               
60-468
               

               
Cow position:
               
chr17:27058715-27058298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
172, 399
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr17:12278329-12278510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr17:12270076-12269804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
61-458
               

               
Cow position:
               
chr17:15188242-15187824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 339
               

               
Conread position:
               
62-444
               

               
Cow position:
               
chr17:26631976-26631578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 177
               

               
Conread position:
               
63-230
               

               
Cow position:
               
chr17:38613087-38613257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
63-480
               

               
Cow position:
               
chr17:28467977-28468389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr17:14762277-14762000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
64-443
               

               
Cow position:
               
chr17:31701278-31701663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 162
               

               
Conread position:
               
65-469
               

               
Cow position:
               
chr17:18146025-18146444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
68-341
               

               
Cow position:
               
chr17:4967956-4968238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
68-458
               

               
Cow position:
               
chr17:31037534-31037133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 372
               

               
Conread position:
               
70-444
               

               
Cow position:
               
chr17:24559147-24559522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
71-446
               

               
Cow position:
               
chr17:14003666-14004055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
72-262
               

               
Cow position:
               
chr17:5382136-5381947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
72-444
               

               
Cow position:
               
chr17:3467619-3467980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
77-236
               

               
Cow position:
               
chr17:40815884-40815729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
82-436
               

               
Cow position:
               
chr17:24928339-24928699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
84-444
               

               
Cow position:
               
chr17:30728384-30728736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
87-442
               

               
Cow position:
               
chr17:9966163-9965795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 265
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr17:25117758-25118116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr17:26233960-26233598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr17:32280535-32280897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 5
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr17:40673252-40673602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
88-444
               

               
Cow position:
               
chr17:9056830-9056470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
89-325
               

               
Cow position:
               
chr17:14060909-14060664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr17:39857261-39857506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
92-408
               

               
Cow position:
               
chr17:27833491-27833168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 247
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr17:1113755-1114124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr17:6328982-6329338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 278
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr17:6318987-6318639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr17:21414965-21414589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 326
               

               
Conread position:
               
92-452
               

               
Cow position:
               
chr17:21437448-21437071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 193
               

               
Conread position:
               
93-443
               

               
Cow position:
               
chr17:10432102-10431736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
93-446
               

               
Cow position:
               
chr17:29025939-29026306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 251
               

               
Conread position:
               
95-444
               

               
Cow position:
               
chr17:4300045-4299713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
97-388
               

               
Cow position:
               
chr17:20874266-20874569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
97-397
               

               
Cow position:
               
chr17:33411147-33410825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 268
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr17:7136858-7137095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
98-368
               

               
Cow position:
               
chr17:6848681-6848947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
101-446
               

               
Cow position:
               
chr17:20884402-20884756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
101-453
               

               
Cow position:
               
chr17:45296313-45296644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
102-381
               

               
Cow position:
               
chr17:33658190-33657908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
103-444
               

               
Cow position:
               
chr17:32348955-32349292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
104-460
               

               
Cow position:
               
chr17:31856545-31856919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 256
               

               
Conread position:
               
105-491
               

               
Cow position:
               
chr17:1040629-1041014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
106-443
               

               
Cow position:
               
chr17:37699472-37699113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
107-355
               

               
Cow position:
               
chr17:25501995-25502250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 188
               

               
Conread position:
               
107-454
               

               
Cow position:
               
chr17:23563904-23563571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
108-322
               

               
Cow position:
               
chr17:23798168-23798388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
108-389
               

               
Cow position:
               
chr17:35339029-35338744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
108-464
               

               
Cow position:
               
chr17:36179135-36178796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
109-372
               

               
Cow position:
               
chr17:10561517-10561786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 133
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr17:11215342-11215009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
111-438
               

               
Cow position:
               
chr17:40851872-40852191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
113-444
               

               
Cow position:
               
chr17:34860278-34860602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
174, 16
               

               
Conread position:
               
116-469
               

               
Cow position:
               
chr17:7692960-7693328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
119-293
               

               
Cow position:
               
chr17:32009540-32009362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
120-468
               

               
Cow position:
               
chr17:25616157-25616495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
122-444
               

               
Cow position:
               
chr17:35573663-35573976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
123-443
               

               
Cow position:
               
chr17:8598200-8597881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr17:23517035-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
94, 231
               

               
Conread position:
               
127-388
               

               
Cow position:
               
chr17:27203137-27202876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 233
               

               
Conread position:
               
128-427
               

               
Cow position:
               
chr17:2275382-2275678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
129-458
               

               
Cow position:
               
chr17:11912588-11912262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
130-415
               

               
Cow position:
               
chr17:14652870-14652576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr17:25514213-25513889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
130-484
               

               
Cow position:
               
chr17:21489714-21489350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr17:21325244-21325571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
131-458
               

               
Cow position:
               
chr17:36864542-36864868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 216
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr17:25342828-25342511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
134-368
               

               
Cow position:
               
chr17:21758224-21757988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
137-362
               

               
Cow position:
               
chr17:11368933-11368704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
138-378
               

               
Cow position:
               
chr17:23883338-23883105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
138-381
               

               
Cow position:
               
chr17:38263568-38263326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
141-444
               

               
Cow position:
               
chr17:9824590-9824896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 237
               

               
Conread position:
               
142-376
               

               
Cow position:
               
chr17:40406366-40406608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
146-458
               

               
Cow position:
               
chr17:12511049-12510740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chr17:21478995-21478806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
152-444
               

               
Cow position:
               
chr17:40638882-40639176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
153-444
               

               
Cow position:
               
chr17:3883814-3883513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
153-444
               

               
Cow position:
               
chr17:21806516-21806220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
154-443
               

               
Cow position:
               
chr17:1025886-1025606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr17:3153634-3153339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr17:34791129-34790836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 234
               

               
Conread position:
               
157-448
               

               
Cow position:
               
chr17:24750854-24751150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
158-448
               

               
Cow position:
               
chr17:39606367-39606655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
160-444
               

               
Cow position:
               
chr17:36814300-36814594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 179
               

               
Conread position:
               
161-491
               

               
Cow position:
               
chr17:5372588-5372260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
164-338
               

               
Cow position:
               
chr17:22245936-22246112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
164-435
               

               
Cow position:
               
chr17:16158435-16158703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
164-469
               

               
Cow position:
               
chr17:9770455-9770757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
168-444
               

               
Cow position:
               
chr17:22051644-22051362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 209
               

               
Conread position:
               
173-381
               

               
Cow position:
               
chr17:22017134-22016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr17:25126305-25126573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 173
               

               
Conread position:
               
173-448
               

               
Cow position:
               
chr17:18934210-18934489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
173-486
               

               
Cow position:
               
chr17:21039517-21039826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
174-458
               

               
Cow position:
               
chr17:37816236-37815946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 171
               

               
Conread position:
               
175-444
               

               
Cow position:
               
chr17:33155200-33154929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 200
               

               
Conread position:
               
176-442
               

               
Cow position:
               
chr17:5288124-5288391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
176-444
               

               
Cow position:
               
chr17:35051563-35051849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
177-444
               

               
Cow position:
               
chr17:25800925-25800655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
178-469
               

               
Cow position:
               
chr17:26448501-26448799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
182-468
               

               
Cow position:
               
chr17:17044371-17044080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 214
               

               
Conread position:
               
187-444
               

               
Cow position:
               
chr17:24120125-24119862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
187-444
               

               
Cow position:
               
chr17:32333125-32332863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 242
               

               
Conread position:
               
188-444
               

               
Cow position:
               
chr17:8948996-8948738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
188-458
               

               
Cow position:
               
chr17:40412554-40412822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
197-458
               

               
Cow position:
               
chr17:18767016-18766737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr17:25473298-25473052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr17:33164835-33164591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
202-446
               

               
Cow position:
               
chr17:24163019-24163265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
203-444
               

               
Cow position:
               
chr17:8815173-8815416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
203-444
               

               
Cow position:
               
chr17:9932319-9932082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
203-458
               

               
Cow position:
               
chr17:12959088-12959347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
204-444
               

               
Cow position:
               
chr17:3388808-3389063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr17:18848156-18847989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
218-444
               

               
Cow position:
               
chr17:26637858-26637627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
218-467
               

               
Cow position:
               
chr17:42150395-42150641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
228, 8
               

               
Conread position:
               
220-443
               

               
Cow position:
               
chr17:21466257-21466030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr17:26575223-26574989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
220-458
               

               
Cow position:
               
chr17:25511249-25511483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr17:21472174-21471943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
221-442
               

               
Cow position:
               
chr17:43315280-43315063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
221-444
               

               
Cow position:
               
chr17:37341031-37340802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
221-458
               

               
Cow position:
               
chr17:40276746-40276984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
227-443
               

               
Cow position:
               
chr17:17034961-17035174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
233-444
               

               
Cow position:
               
chr17:7959198-7959408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
235-388
               

               
Cow position:
               
chr17:13236320-13236170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
242-444
               

               
Cow position:
               
chr17:946384-946585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
254-469
               

               
Cow position:
               
chr17:21718958-21718741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr17:20836136-20836319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
258-444
               

               
Cow position:
               
chr17:10016322-10016506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
261-443
               

               
Cow position:
               
chr17:39963923-39964106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr17:15728519-15728697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
262-454
               

               
Cow position:
               
chr17:5027413-5027225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
262-468
               

               
Cow position:
               
chr17:24895120-24895332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 169
               

               
Conread position:
               
264-458
               

               
Cow position:
               
chr17:35043875-35043682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
265-444
               

               
Cow position:
               
chr17:21676940-21677120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
266-439
               

               
Cow position:
               
chr17:25348419-25348591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
268-458
               

               
Cow position:
               
chr17:7711490-7711681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
271-443
               

               
Cow position:
               
chr17:24767232-24767060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-448
               

               
Cow position:
               
chr17:20881751-20881582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
285-431
               

               
Cow position:
               
chr17:24757597-24757739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
285-445
               

               
Cow position:
               
chr17:7037554-7037390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
286-467
               

               
Cow position:
               
chr17:8663575-8663761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
287-444
               

               
Cow position:
               
chr17:13297452-13297614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
292-442
               

               
Cow position:
               
chr17:9260535-9260384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
298-443
               

               
Cow position:
               
chr17:27606600-27606741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
300-458
               

               
Cow position:
               
chr17:34806582-34806422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
304-458
               

               
Cow position:
               
chr17:17822179-17822329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
310-466
               

               
Cow position:
               
chr17:8809410-8809256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
136, 66
               
Show alignments to all cow chromosomes.