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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-93B09.5
        

               
Conread position:
               
1-444
               

               
Cow position:
               
chr3:53592983-53592522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr3:29891698-29891226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr3:5899547-5899764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr3:7331398-7330952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr3:8901143-8901300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr3:77276682-77276496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr3:62826901-62826527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
6-134
               

               
Cow position:
               
chr3:76614365-76614485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-142
               

               
Cow position:
               
chr3:18887302-18887443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr3:48900779-48900617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr3:22908111-22907940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr3:18607091-18607279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr3:8557058-8556875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr3:65020057-65020247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr3:15079345-15079156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr3:34392373-34392183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr3:53903909-53904102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr3:16004263-16004066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr3:42483623-42483826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr3:69961988-69961789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr3:42359037-42359243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr3:17284559-17284775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr3:22170912-22171117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr3:27285948-27286162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr3:58286175-58285969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr3:58383691-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr3:42588072-42588295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr3:66978566-66978774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr3:83934237-83934448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr3:23277822-23277605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr3:48370854-48371075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr3:77224843-77225056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr3:12255203-12255419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr3:66116389-66116169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr3:34316241-34316015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr3:4223038-4223257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr3:15081016-15080802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr3:42423608-42423388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr3:22872329-22872101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr3:30701045-30701252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr3:42594933-42594707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr3:11640157-11640383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr3:48629863-48629643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr3:54959914-54960138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr3:5495774-5495540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr3:48269586-48269814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr3:62292393-62292170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr3:30417852-30418080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr3:77227041-77227274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr3:41367260-41367033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr3:58951344-58951568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr3:63945252-63945025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr3:64716745-64716977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr3:20155553-20155784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr3:75727866-75727620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr3:8159678-8159918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr3:25691472-25691718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr3:11019841-11020093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr3:23477958-23478214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr3:77496540-77496816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr3:78894591-78894337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr3:19789396-19789125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr3:57554124-57553859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr3:70333750-70333492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr3:78782697-78782947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr3:3164773-3164505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr3:82657362-82657097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr3:78200990-78201259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr3:81939974-81940249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr3:32597205-32596941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr3:74409218-74409478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr3:59514834-59515100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
213, 13
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr3:45312777-45313049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr3:49731914-49731634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr3:49218584-49218302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr3:5416508-5416204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr3:21341240-21340939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr3:60892356-60892653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr3:75057391-75057104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr3:54808882-54809199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr3:36100551-36100878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr3:53588667-53588343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:40827577-40827901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:59366270-59366595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:79902226-79902538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:80202330-80202647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr3:19708376-19708065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr3:46350379-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr3:26920620-26920952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr3:83920921-83921228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr3:14263115-14263438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr3:53112891-53113220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr3:79592166-79591846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr3:33698444-33698779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr3:44535879-44535547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr3:79148553-79148235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:23111781-23111462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:31206595-31206927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:51012810-51012502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:51604884-51604564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:52863460-52863133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:66610115-66609793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:68583279-68582948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr3:81277981-81277641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr3:27546110-27545762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:56646-56316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:5096926-5097268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:37186559-37186887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:59630777-59630452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:75711042-75711367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr3:69750978-69750641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-353
               

               
Cow position:
               
chr3:59798977-59799321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr3:5374058-5374403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr3:61840012-61840350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr3:72675810-72676167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr3:38346924-38347276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr3:26219338-26218965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr3:55085461-55085082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr3:59588242-59588598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr3:80581394-80581743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr3:5101037-5100683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr3:36672282-36671902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr3:37599693-37599336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr3:83816070-83815695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr3:59208537-59208889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr3:34270654-34271009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr3:79292557-79292926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr3:49650103-49650487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr3:50762848-50763220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr3:45534576-45534195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr3:12712200-12711806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr3:56059530-56059918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr3:59691627-59691997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
229, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr3:80071840-80072238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr3:49382675-49383056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr3:61278629-61279020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr3:73443364-73442981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr3:17895577-17895962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:70566015-70565599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr3:2630521-2630903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr3:53573027-53572609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr3:18497748-18498161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr3:31056279-31055867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr3:44101704-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr3:65413552-65413128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-428
               

               
Cow position:
               
chr3:46161122-46160711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr3:20129664-20130093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr3:55117249-55116821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr3:61857219-61857665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr3:68627952-68627528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr3:11987053-11987488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
6-441
               

               
Cow position:
               
chr3:210045-210483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
6-441
               

               
Cow position:
               
chr3:20663815-20663381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:7566696-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:9663464-9663007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:17456546-17456105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:72473630-72474084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:79884763-79884318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr3:80973076-80973513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:18854816-18855241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:50768402-50768842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:53046934-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:53270549-53270996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:66901019-66900564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr3:82056394-82055965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:2518814-2518377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:4461766-4461326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:7763386-7763822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:8393069-8393503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:9641287-9641719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:13330049-13329629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:14552601-14553036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:15954354-15953918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:16547399-16547834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:17937116-17936683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:17957190-17957625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:18066857-18067294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:18459797-18459373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:20802906-20802476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:23408619-23408200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:30179805-30180247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:48252620-48253043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:48362806-48363233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:49119309-49118866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:49678845-49679298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:53429168-53428754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:53739468-53739018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:53790821-53790378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:54050296-54049865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:54782289-54781829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:55733666-55734122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:56582566-56583012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:59001022-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:59392384-59391961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:59604594-59605006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:65058425-65058863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:65968878-65969338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:66885315-66884866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:67929543-67929095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:68303051-68303482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr3:75479735-75480162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 13
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr3:15158764-15159202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr3:74233923-74234354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr3:74600840-74601280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-452
               

               
Cow position:
               
chr3:20675156-20674702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-452
               

               
Cow position:
               
chr3:80564686-80565134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr3:17222421-17221958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr3:30463443-30463000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:7678396-7678844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:10958505-10958061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:23169347-23168890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:23876721-23877182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:26903838-26904277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:53150050-53150512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:54434697-54435147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr3:70895769-70896218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:72138-72602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:2397060-2396614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:37041152-37041602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:57763946-57764392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:74533071-74533513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr3:76138212-76138638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr3:73467342-73467810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr3:78076912-78077375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr3:55124555-55124093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr3:21302708-21302252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr3:29887701-29887255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr3:61539519-61539992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr3:68708278-68707837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr3:15057875-15057455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 15
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr3:26682070-26681627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr3:71246760-71247208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr3:71497423-71496940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr3:75158088-75158549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-470
               

               
Cow position:
               
chr3:26065724-26066179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-471
               

               
Cow position:
               
chr3:53909837-53910303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
6-473
               

               
Cow position:
               
chr3:13899730-13899262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-480
               

               
Cow position:
               
chr3:2674752-2675229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
6-485
               

               
Cow position:
               
chr3:55190027-55189547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
6-489
               

               
Cow position:
               
chr3:49461214-49460718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr3:61262527-61262703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-193
               

               
Cow position:
               
chr3:19198405-19198584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr3:8457381-8457584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr3:31501077-31501289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr3:43528513-43528302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr3:23944821-23945040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr3:32399531-32399313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr3:81473728-81473961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr3:80082093-80081871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
214, 11
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr3:15661977-15661725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr3:28675713-28675978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr3:30358910-30358641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr3:51255508-51255781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr3:48530361-48530646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr3:9843308-9843603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr3:5851203-5850896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr3:79220573-79220903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr3:27289661-27289991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr3:27532938-27532604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr3:5365410-5365738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
220, 11
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr3:50069503-50069839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
223, 11
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr3:19006391-19006737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr3:28908471-28908115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
7-371
               

               
Cow position:
               
chr3:38691681-38691315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
7-380
               

               
Cow position:
               
chr3:48296435-48296799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
7-381
               

               
Cow position:
               
chr3:67704264-67704648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr3:47284562-47284936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr3:28898498-28898091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr3:17695282-17694838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr3:31419425-31419859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr3:68647884-68648341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr3:71231130-71231562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
7-456
               

               
Cow position:
               
chr3:17710061-17710515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr3:2036022-2036482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr3:38863837-38864295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr3:6873521-6873090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr3:71161518-71161967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
7-465
               

               
Cow position:
               
chr3:48852242-48851783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
7-467
               

               
Cow position:
               
chr3:73764469-73764028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr3:59648984-59649462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr3:51609541-51609745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
8-210
               

               
Cow position:
               
chr3:55815069-55815264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
8-210
               

               
Cow position:
               
chr3:68342529-68342327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr3:56704812-56704616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-224
               

               
Cow position:
               
chr3:38497677-38497883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
8-225
               

               
Cow position:
               
chr3:2483178-2483387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr3:61678416-61678639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr3:61191192-61190978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr3:59205966-59206195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr3:56637391-56637654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr3:27544604-27544343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr3:54862699-54862417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
8-311
               

               
Cow position:
               
chr3:69849777-69849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr3:42177885-42178200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr3:4031693-4032019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr3:14626425-14626089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr3:12675314-12674981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
8-368
               

               
Cow position:
               
chr3:15229094-15228735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
8-369
               

               
Cow position:
               
chr3:66292453-66292087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
8-378
               

               
Cow position:
               
chr3:64172170-64172538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr3:70401628-70401996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr3:81371381-81371749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-393
               

               
Cow position:
               
chr3:67744903-67744514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
8-423
               

               
Cow position:
               
chr3:32584883-32585288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:2024909-2025367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:2393241-2392805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:14725022-14725480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:22676357-22675943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
273, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:29812969-29813390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:31298435-31297993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:53384558-53384116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:64281211-64280774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
8-457
               

               
Cow position:
               
chr3:68586763-68587196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
218, 10
               

               
Conread position:
               
8-458
               

               
Cow position:
               
chr3:23471743-23471284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-458
               

               
Cow position:
               
chr3:65236750-65237205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr3:76188419-76188635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
162, 9
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr3:6853774-6853544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr3:45523990-45524289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
9-427
               

               
Cow position:
               
chr3:54945851-54946271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr3:79208276-79208063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr3:29807189-29807494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr3:73759792-73759473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
10-332
               

               
Cow position:
               
chr3:4457349-4457019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr3:10347081-10347430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr3:525081-525434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 8
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr3:78946112-78945751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
10-444
               

               
Cow position:
               
chr3:45881636-45882063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
10-444
               

               
Cow position:
               
chr3:72776967-72777397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr3:11254422-11253979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
215, 5
               

               
Conread position:
               
11-443
               

               
Cow position:
               
chr3:51578593-51578161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
11-459
               

               
Cow position:
               
chr3:77271540-77271103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
13-238
               

               
Cow position:
               
chr3:59701742-59701965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
13-279
               

               
Cow position:
               
chr3:84000342-84000612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
13-431
               

               
Cow position:
               
chr3:45279187-45279620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
13-441
               

               
Cow position:
               
chr3:45647405-45647827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr3:13302126-13301685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr3:25690515-25690964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
15-342
               

               
Cow position:
               
chr3:72131567-72131236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
17-444
               

               
Cow position:
               
chr3:61225002-61224585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
18-142
               

               
Cow position:
               
chr3:9638859-9638736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr3:20092769-20092528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
19-378
               

               
Cow position:
               
chr3:50614374-50614739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
19-468
               

               
Cow position:
               
chr3:6689726-6690194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr3:72018855-72019028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 6
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr3:55970961-55971154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr3:59603703-59603896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
20-234
               

               
Cow position:
               
chr3:2903554-2903348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
20-277
               

               
Cow position:
               
chr3:17451198-17450942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr3:35702622-35702924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr3:52017492-52017813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
20-323
               

               
Cow position:
               
chr3:71430476-71430161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
20-378
               

               
Cow position:
               
chr3:22716545-22716199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
20-388
               

               
Cow position:
               
chr3:70899636-70899999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 6
               

               
Conread position:
               
20-393
               

               
Cow position:
               
chr3:8393671-8394054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
20-398
               

               
Cow position:
               
chr3:73460715-73461083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
20-443
               

               
Cow position:
               
chr3:60933151-60933581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr3:29596129-29596559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr3:33253146-33252728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr3:57754748-57754311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
20-454
               

               
Cow position:
               
chr3:60597284-60597713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 6
               

               
Conread position:
               
22-225
               

               
Cow position:
               
chr3:73590261-73590058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr3:53509949-53509743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr3:65800329-65800639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
22-443
               

               
Cow position:
               
chr3:34096216-34095809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
22-443
               

               
Cow position:
               
chr3:54903307-54903730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
22-444
               

               
Cow position:
               
chr3:55970241-55970679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
22-465
               

               
Cow position:
               
chr3:30009173-30008722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
24-198
               

               
Cow position:
               
chr3:61467344-61467521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
25-191
               

               
Cow position:
               
chr3:2008009-2008170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
25-206
               

               
Cow position:
               
chr3:52147940-52147748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr3:33633147-33632948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr3:4332103-4332354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
25-329
               

               
Cow position:
               
chr3:39171744-39171437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
25-331
               

               
Cow position:
               
chr3:66708332-66708016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
25-331
               

               
Cow position:
               
chr3:80818469-80818768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
25-355
               

               
Cow position:
               
chr3:58969156-58968828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr3:59101575-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr3:39066073-39066470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
25-442
               

               
Cow position:
               
chr3:174669-175105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-443
               

               
Cow position:
               
chr3:69417048-69416615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr3:2506741-2506312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr3:51234356-51233940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr3:73394856-73395279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr3:75080506-75080916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
25-458
               

               
Cow position:
               
chr3:18393644-18393225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-458
               

               
Cow position:
               
chr3:58540793-58540338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
25-468
               

               
Cow position:
               
chr3:77188182-77188630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
25-472
               

               
Cow position:
               
chr3:83474488-83474948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
26-235
               

               
Cow position:
               
chr3:77467675-77467887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
26-260
               

               
Cow position:
               
chr3:45307675-45307916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
26-322
               

               
Cow position:
               
chr3:38350454-38350156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr3:57624208-57624566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
26-423
               

               
Cow position:
               
chr3:83455411-83455010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
26-437
               

               
Cow position:
               
chr3:52607924-52608337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
26-442
               

               
Cow position:
               
chr3:82020103-82019680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:7338033-7337623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:16333547-16333968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
26-464
               

               
Cow position:
               
chr3:59473853-59474304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
27-178
               

               
Cow position:
               
chr3:30384554-30384401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr3:364477-364265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr3:4087424-4087213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr3:28692688-28692483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr3:54881498-54881711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr3:8604272-8604039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr3:35283356-35283110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
27-320
               

               
Cow position:
               
chr3:23476740-23477029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr3:56523685-56523402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
27-325
               

               
Cow position:
               
chr3:2216101-2216413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
27-340
               

               
Cow position:
               
chr3:23448389-23448077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
27-341
               

               
Cow position:
               
chr3:20437904-20437595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
27-368
               

               
Cow position:
               
chr3:45647881-45648218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
27-377
               

               
Cow position:
               
chr3:55272301-55271947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
27-381
               

               
Cow position:
               
chr3:61143835-61144196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr3:17935181-17934830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr3:81471359-81470987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr3:48241363-48241753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr3:72390822-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr3:39970130-39969701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr3:3985072-3985480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 28
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr3:57577436-57577860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr3:71237899-71238314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr3:83442138-83441729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
27-458
               

               
Cow position:
               
chr3:54740130-54739722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
27-471
               

               
Cow position:
               
chr3:39661706-39661264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr3:8716989-8717197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr3:44535022-44534765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
28-320
               

               
Cow position:
               
chr3:61171767-61171467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-323
               

               
Cow position:
               
chr3:22820312-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-329
               

               
Cow position:
               
chr3:14633244-14632934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr3:81401563-81401258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
28-341
               

               
Cow position:
               
chr3:26553968-26553654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
28-371
               

               
Cow position:
               
chr3:13577443-13577111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr3:55836086-55835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr3:3556287-3556712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr3:56476425-56476838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr3:74088431-74088013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chr3:23269846-23270012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr3:33327448-33327655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
29-396
               

               
Cow position:
               
chr3:2680255-2680630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
29-408
               

               
Cow position:
               
chr3:73708793-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr3:13353101-13353528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr3:20997235-20996838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
282, 10
               

               
Conread position:
               
30-230
               

               
Cow position:
               
chr3:52650788-52650585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
30-320
               

               
Cow position:
               
chr3:23092238-23091935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
30-428
               

               
Cow position:
               
chr3:26970570-26970961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
30-444
               

               
Cow position:
               
chr3:80740315-80740717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
30-475
               

               
Cow position:
               
chr3:16752508-16752057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
30-478
               

               
Cow position:
               
chr3:49482963-49482517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr3:41328201-41328469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
31-322
               

               
Cow position:
               
chr3:43571487-43571790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr3:18725888-18725546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
32-444
               

               
Cow position:
               
chr3:5045063-5044646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
33-440
               

               
Cow position:
               
chr3:53221762-53222172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
35-444
               

               
Cow position:
               
chr3:55947325-55947763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr3:26894412-26894604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
36-311
               

               
Cow position:
               
chr3:19404074-19404335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
36-351
               

               
Cow position:
               
chr3:11711704-11712036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
36-399
               

               
Cow position:
               
chr3:49327687-49328062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 334
               

               
Conread position:
               
36-442
               

               
Cow position:
               
chr3:59610973-59610557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
36-444
               

               
Cow position:
               
chr3:44932259-44932676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr3:31047197-31046903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
39-186
               

               
Cow position:
               
chr3:23417114-23416967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
39-317
               

               
Cow position:
               
chr3:63332564-63332855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
39-351
               

               
Cow position:
               
chr3:23445136-23444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
39-355
               

               
Cow position:
               
chr3:25754790-25755095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 14
               

               
Conread position:
               
39-368
               

               
Cow position:
               
chr3:15752874-15752548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr3:3738238-3738578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr3:115961-116290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
39-444
               

               
Cow position:
               
chr3:43233257-43233667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
39-459
               

               
Cow position:
               
chr3:52652320-52651902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
40-322
               

               
Cow position:
               
chr3:30055691-30055415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr3:35074437-35074597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
41-225
               

               
Cow position:
               
chr3:82359801-82359983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
41-293
               

               
Cow position:
               
chr3:49793165-49793409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
42-311
               

               
Cow position:
               
chr3:83201772-83201493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
43-446
               

               
Cow position:
               
chr3:18686674-18687067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
46-389
               

               
Cow position:
               
chr3:13507223-13507576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
46-444
               

               
Cow position:
               
chr3:63315891-63316291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
46-448
               

               
Cow position:
               
chr3:81087848-81087468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
49-215
               

               
Cow position:
               
chr3:29334751-29334580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
49-225
               

               
Cow position:
               
chr3:4861452-4861624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
49-338
               

               
Cow position:
               
chr3:34937603-34937902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
51, 235
               

               
Conread position:
               
49-441
               

               
Cow position:
               
chr3:70334938-70334531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
49-443
               

               
Cow position:
               
chr3:17134102-17134494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
50-468
               

               
Cow position:
               
chr3:15052181-15051763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 42
               

               
Conread position:
               
53-388
               

               
Cow position:
               
chr3:17447841-17447506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr3:67930411-67930006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
53-464
               

               
Cow position:
               
chr3:8060899-8061302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
53-468
               

               
Cow position:
               
chr3:22232876-22232475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
54-322
               

               
Cow position:
               
chr3:21547334-21547058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
54-368
               

               
Cow position:
               
chr3:27940360-27940055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 120
               

               
Conread position:
               
54-444
               

               
Cow position:
               
chr3:22888148-22887762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
54-468
               

               
Cow position:
               
chr3:27274301-27274717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
55-444
               

               
Cow position:
               
chr3:68881346-68880967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr3:23215811-23215644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
59-223
               

               
Cow position:
               
chr3:61361181-61361344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
59-355
               

               
Cow position:
               
chr3:76015072-76015367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr3:15506220-15506536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
59-423
               

               
Cow position:
               
chr3:74119673-74119285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 237
               

               
Conread position:
               
59-444
               

               
Cow position:
               
chr3:53836912-53836546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
59-458
               

               
Cow position:
               
chr3:68146063-68145677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr3:59621862-59621539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
61-270
               

               
Cow position:
               
chr3:21051063-21050847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
61-322
               

               
Cow position:
               
chr3:56301573-56301316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
61-428
               

               
Cow position:
               
chr3:74134480-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
62-441
               

               
Cow position:
               
chr3:56612132-56612523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 292
               

               
Conread position:
               
62-444
               

               
Cow position:
               
chr3:74754105-74754479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
63-381
               

               
Cow position:
               
chr3:60265459-60265152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
63-442
               

               
Cow position:
               
chr3:78092733-78092349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
64-331
               

               
Cow position:
               
chr3:49140259-49139998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
64-375
               

               
Cow position:
               
chr3:2198660-2198977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 269
               

               
Conread position:
               
64-458
               

               
Cow position:
               
chr3:83215031-83215447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
65-417
               

               
Cow position:
               
chr3:11063157-11063504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
65-449
               

               
Cow position:
               
chr3:16656702-16656316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
67-444
               

               
Cow position:
               
chr3:76268201-76267810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
69-444
               

               
Cow position:
               
chr3:23105583-23105201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 306
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr3:74878806-74878538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
71-306
               

               
Cow position:
               
chr3:39328185-39328426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
71-444
               

               
Cow position:
               
chr3:36375763-36375374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
72-341
               

               
Cow position:
               
chr3:78896434-78896708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
72-428
               

               
Cow position:
               
chr3:25944863-25945243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 295
               

               
Conread position:
               
72-444
               

               
Cow position:
               
chr3:70609408-70609789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
72-458
               

               
Cow position:
               
chr3:25477598-25477971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
72-468
               

               
Cow position:
               
chr3:76713536-76713125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
73-441
               

               
Cow position:
               
chr3:45211082-45211465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 282
               

               
Conread position:
               
73-444
               

               
Cow position:
               
chr3:4319497-4319883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
75-444
               

               
Cow position:
               
chr3:67698068-67698443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
82-341
               

               
Cow position:
               
chr3:57760294-57760559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
51, 257
               

               
Conread position:
               
82-444
               

               
Cow position:
               
chr3:12705750-12705383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 270
               

               
Conread position:
               
83-444
               

               
Cow position:
               
chr3:38035795-38035424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 273
               

               
Conread position:
               
84-341
               

               
Cow position:
               
chr3:74502527-74502264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr3:7940757-7940485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr3:6772792-6772550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr3:79950427-79950183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr3:3637988-3638239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr3:74239845-74239587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr3:27697177-27696866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
87-428
               

               
Cow position:
               
chr3:8591556-8591220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr3:38828568-38828915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
87-464
               

               
Cow position:
               
chr3:55712231-55712614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
88-380
               

               
Cow position:
               
chr3:49791011-49790715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
88-448
               

               
Cow position:
               
chr3:6182398-6182064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
90-454
               

               
Cow position:
               
chr3:59034841-59035219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
91-316
               

               
Cow position:
               
chr3:36446912-36446682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
92-310
               

               
Cow position:
               
chr3:70631824-70632051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
92-319
               

               
Cow position:
               
chr3:53095130-53094892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
92-322
               

               
Cow position:
               
chr3:46479348-46479111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
92-341
               

               
Cow position:
               
chr3:10896638-10896883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
92-389
               

               
Cow position:
               
chr3:66884135-66883833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
92-443
               

               
Cow position:
               
chr3:74079833-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 221
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr3:53875953-53875598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr3:57273872-57274222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
92-468
               

               
Cow position:
               
chr3:30940626-30940998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
92-471
               

               
Cow position:
               
chr3:55319097-55318708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
93-431
               

               
Cow position:
               
chr3:13890274-13890631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 256
               

               
Conread position:
               
95-381
               

               
Cow position:
               
chr3:63269034-63269323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
95-435
               

               
Cow position:
               
chr3:54374052-54373702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 255
               

               
Conread position:
               
95-444
               

               
Cow position:
               
chr3:83798030-83797659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
96-444
               

               
Cow position:
               
chr3:55434141-55434495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
96-444
               

               
Cow position:
               
chr3:68156551-68156891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
96-445
               

               
Cow position:
               
chr3:59596995-59597338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 155
               

               
Conread position:
               
97-262
               

               
Cow position:
               
chr3:27212173-27212346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
97-335
               

               
Cow position:
               
chr3:79271146-79270902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
97-446
               

               
Cow position:
               
chr3:4050006-4050347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr3:30221998-30222292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
98-444
               

               
Cow position:
               
chr3:7661666-7662021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
112, 193
               

               
Conread position:
               
100-444
               

               
Cow position:
               
chr3:53318217-53318574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 237
               

               
Conread position:
               
101-249
               

               
Cow position:
               
chr3:22924593-22924441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
101-371
               

               
Cow position:
               
chr3:24352680-24352951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
101-388
               

               
Cow position:
               
chr3:20678020-20677733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
101-424
               

               
Cow position:
               
chr3:75687624-75687291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 257
               

               
Conread position:
               
101-443
               

               
Cow position:
               
chr3:19793775-19793427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
101-465
               

               
Cow position:
               
chr3:19198802-19199171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
102-322
               

               
Cow position:
               
chr3:79092579-79092350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 174
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr3:34294469-34294217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr3:54100902-54100549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr3:54506525-54506870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
105-331
               

               
Cow position:
               
chr3:34669909-34669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
105-466
               

               
Cow position:
               
chr3:79094222-79093873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
105-468
               

               
Cow position:
               
chr3:26981883-26982242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
107-444
               

               
Cow position:
               
chr3:70762302-70761959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 197
               

               
Conread position:
               
107-444
               

               
Cow position:
               
chr3:76922842-76922509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 227
               

               
Conread position:
               
108-444
               

               
Cow position:
               
chr3:36418644-36418323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
109-444
               

               
Cow position:
               
chr3:62046485-62046835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
113-435
               

               
Cow position:
               
chr3:55819574-55819904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 232
               

               
Conread position:
               
113-444
               

               
Cow position:
               
chr3:75107621-75107936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
114-444
               

               
Cow position:
               
chr3:23920602-23920262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 179
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr3:26874420-26874698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 171
               

               
Conread position:
               
117-444
               

               
Cow position:
               
chr3:32787291-32787626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr3:48810805-48810474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr3:71478425-71478756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr3:55109782-55109538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
119-444
               

               
Cow position:
               
chr3:2648678-2648344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
120-458
               

               
Cow position:
               
chr3:68616491-68616152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
122-329
               

               
Cow position:
               
chr3:59884237-59884019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
123-388
               

               
Cow position:
               
chr3:53508458-53508720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
123-467
               

               
Cow position:
               
chr3:19900506-19900844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
126-364
               

               
Cow position:
               
chr3:46541987-46541745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
127-268
               

               
Cow position:
               
chr3:18056286-18056427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 118
               

               
Conread position:
               
129-458
               

               
Cow position:
               
chr3:29946239-29946569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
130-367
               

               
Cow position:
               
chr3:32184175-32183934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 192
               

               
Conread position:
               
130-381
               

               
Cow position:
               
chr3:24935216-24935466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
239, 100
               

               
Conread position:
               
130-438
               

               
Cow position:
               
chr3:60264869-60264563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr3:24468533-24468222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr3:81039900-81039582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 269
               

               
Conread position:
               
130-472
               

               
Cow position:
               
chr3:73915958-73915632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
132-396
               

               
Cow position:
               
chr3:74242843-74243109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
132-441
               

               
Cow position:
               
chr3:15153540-15153849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr3:48073026-48072722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr3:55177905-55177587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 245
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr3:70334117-70333805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 225
               

               
Conread position:
               
132-446
               

               
Cow position:
               
chr3:77581956-77582272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 151
               

               
Conread position:
               
133-376
               

               
Cow position:
               
chr3:62789331-62789078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
134-459
               

               
Cow position:
               
chr3:19585711-19586041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
135-444
               

               
Cow position:
               
chr3:22221170-22221490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
135-445
               

               
Cow position:
               
chr3:79196610-79196928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
137-441
               

               
Cow position:
               
chr3:6299320-6299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
137-444
               

               
Cow position:
               
chr3:74584071-74584354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
137-458
               

               
Cow position:
               
chr3:10372133-10372439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
138-442
               

               
Cow position:
               
chr3:3883965-3883658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 206
               

               
Conread position:
               
138-445
               

               
Cow position:
               
chr3:34871422-34871733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
141-388
               

               
Cow position:
               
chr3:1785385-1785139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
143-368
               

               
Cow position:
               
chr3:73237053-73237284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
143-423
               

               
Cow position:
               
chr3:73820511-73820219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
143-442
               

               
Cow position:
               
chr3:76155846-76156148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr3:47417707-47417407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr3:59040426-59040734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 196
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr3:71238332-71238640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
143-458
               

               
Cow position:
               
chr3:3889708-3889397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
143-463
               

               
Cow position:
               
chr3:1517655-1517331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
143-464
               

               
Cow position:
               
chr3:17331585-17331901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
143-467
               

               
Cow position:
               
chr3:48900479-48900143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
143-469
               

               
Cow position:
               
chr3:21015101-21014764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
144-444
               

               
Cow position:
               
chr3:18426840-18426536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
144-459
               

               
Cow position:
               
chr3:78093524-78093208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
145-444
               

               
Cow position:
               
chr3:17235348-17235040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr3:63177339-63177582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
149-470
               

               
Cow position:
               
chr3:72342109-72342436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
154-444
               

               
Cow position:
               
chr3:35056109-35055812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 188
               

               
Conread position:
               
155-446
               

               
Cow position:
               
chr3:15443859-15443560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
157-388
               

               
Cow position:
               
chr3:84175953-84175715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
157-487
               

               
Cow position:
               
chr3:17058668-17058340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr3:18059575-18059866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
158-444
               

               
Cow position:
               
chr3:58134814-58134520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 193
               

               
Conread position:
               
160-469
               

               
Cow position:
               
chr3:51402784-51403088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr3:10103924-10104147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr3:73298963-73299243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
164-444
               

               
Cow position:
               
chr3:26992446-26992737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
164-473
               

               
Cow position:
               
chr3:45700686-45700998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 176
               

               
Conread position:
               
165-444
               

               
Cow position:
               
chr3:15951031-15950753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
168-468
               

               
Cow position:
               
chr3:58318070-58317754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
168-469
               

               
Cow position:
               
chr3:58527281-58527564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
169-443
               

               
Cow position:
               
chr3:3656400-3656678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
171-444
               

               
Cow position:
               
chr3:73837830-73837554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
173-341
               

               
Cow position:
               
chr3:12670725-12670554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr3:22668303-22668576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 172
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr3:28496717-28496921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr3:10677743-10677552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
176-444
               

               
Cow position:
               
chr3:57704214-57704496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 147
               

               
Conread position:
               
176-444
               

               
Cow position:
               
chr3:65019974-65019689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
177-457
               

               
Cow position:
               
chr3:9116920-9117212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chr3:1036918-1037205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
178-444
               

               
Cow position:
               
chr3:31361312-31361587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
179-443
               

               
Cow position:
               
chr3:3316918-3316645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
179-458
               

               
Cow position:
               
chr3:8349660-8349391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
179-468
               

               
Cow position:
               
chr3:22165523-22165221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
180-492
               

               
Cow position:
               
chr3:44625268-44624971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
181-446
               

               
Cow position:
               
chr3:75238354-75238626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
182-444
               

               
Cow position:
               
chr3:44961092-44960854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
182-451
               

               
Cow position:
               
chr3:19626612-19626337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
187-442
               

               
Cow position:
               
chr3:47753126-47753399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
187-444
               

               
Cow position:
               
chr3:75608399-75608652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
188-366
               

               
Cow position:
               
chr3:3471941-3472129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
190-468
               

               
Cow position:
               
chr3:49363020-49363301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
255, 19
               

               
Conread position:
               
195-468
               

               
Cow position:
               
chr3:59299486-59299762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
197-444
               

               
Cow position:
               
chr3:71474496-71474243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 169
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr3:10668962-10668715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
202-446
               

               
Cow position:
               
chr3:64196741-64196991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
203-449
               

               
Cow position:
               
chr3:4480858-4481112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
204-473
               

               
Cow position:
               
chr3:76269816-76270083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
218-443
               

               
Cow position:
               
chr3:31350166-31349945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
218-444
               

               
Cow position:
               
chr3:33002324-33002549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chr3:14546941-14547177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
228, 12
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr3:59933309-59933559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
220-416
               

               
Cow position:
               
chr3:32409152-32409356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
220-444
               

               
Cow position:
               
chr3:19682635-19682870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
220-458
               

               
Cow position:
               
chr3:68004763-68004529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
220-468
               

               
Cow position:
               
chr3:69785685-69785434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
221-448
               

               
Cow position:
               
chr3:49344634-49344865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
223-441
               

               
Cow position:
               
chr3:18607613-18607824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
226-444
               

               
Cow position:
               
chr3:5040361-5040139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
226-444
               

               
Cow position:
               
chr3:9120791-9121006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 64
               

               
Conread position:
               
226-446
               

               
Cow position:
               
chr3:3946984-3947202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
227-381
               

               
Cow position:
               
chr3:64648439-64648594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
229-441
               

               
Cow position:
               
chr3:53084039-53083822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
232-442
               

               
Cow position:
               
chr3:23132217-23132006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
233-386
               

               
Cow position:
               
chr3:38100094-38100248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
233-423
               

               
Cow position:
               
chr3:5305751-5305951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
233-443
               

               
Cow position:
               
chr3:26603602-26603383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
235-431
               

               
Cow position:
               
chr3:82123593-82123402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
240-419
               

               
Cow position:
               
chr3:73421532-73421353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
247-444
               

               
Cow position:
               
chr3:15160488-15160681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
248-444
               

               
Cow position:
               
chr3:67407397-67407203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr3:75966809-75966618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
254-419
               

               
Cow position:
               
chr3:28870781-28870946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 84
               

               
Conread position:
               
254-444
               

               
Cow position:
               
chr3:20021243-20021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
254-468
               

               
Cow position:
               
chr3:22924401-22924189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
192, 104
               

               
Conread position:
               
261-426
               

               
Cow position:
               
chr3:19788849-19788685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr3:31115289-31115114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
263-465
               

               
Cow position:
               
chr3:25289827-25290027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
271-442
               

               
Cow position:
               
chr3:41510567-41510740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
271-444
               

               
Cow position:
               
chr3:22868729-22868552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
271-462
               

               
Cow position:
               
chr3:52845547-52845736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
280-451
               

               
Cow position:
               
chr3:17531738-17531565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
281-442
               

               
Cow position:
               
chr3:19611351-19611191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr3:26977537-26977701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr3:43896057-43895899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
283-471
               

               
Cow position:
               
chr3:56943923-56943737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
284-444
               

               
Cow position:
               
chr3:74050698-74050542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
286-444
               

               
Cow position:
               
chr3:8523147-8522990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
286-464
               

               
Cow position:
               
chr3:44782345-44782520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
287-444
               

               
Cow position:
               
chr3:26393293-26393135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
289-443
               

               
Cow position:
               
chr3:10115307-10115458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
290-444
               

               
Cow position:
               
chr3:77098813-77098660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
290-468
               

               
Cow position:
               
chr3:77653937-77654110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 80
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr3:3262822-3262632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
295-444
               

               
Cow position:
               
chr3:2636964-2637109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               
Show alignments to all cow chromosomes.