• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig2-93B09.5
        

               
Conread position:
               
1-389
               

               
Cow position:
               
chr5:5111309-5110911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr5:36868512-36868951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
4-444
               

               
Cow position:
               
chr5:25495568-25495136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr5:21828634-21829104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr5:16938237-16937822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr5:53835486-53835934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr5:15363661-15364085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr5:62107724-62107269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr5:44054267-44053827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr5:74858344-74858812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr5:23140802-23140353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr5:60015693-60015822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr5:63967874-63967736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr5:32087949-32087767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr5:39419011-39418840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr5:64844345-64844167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr5:24642950-24642770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr5:66297010-66297194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr5:694359-694540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr5:63840374-63840187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr5:46323040-46322851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr5:68715605-68715788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr5:63917638-63917450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr5:41523021-41522835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr5:46104164-46103977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr5:54530754-54530948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr5:72045869-72045678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr5:48178904-48178705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr5:47559764-47559559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr5:61656378-61656582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr5:63236086-63235875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr5:33467269-33467064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr5:9859946-9859728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr5:44583346-44583141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr5:38683128-38683347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr5:16184861-16185077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr5:34115434-34115640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr5:40357098-40356875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr5:56433573-56433794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr5:6986930-6987154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr5:37714133-37713906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr5:60519938-60520155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr5:9430687-9430470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr5:26099598-26099385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr5:34288698-34288478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr5:55942626-55942403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr5:14420573-14420344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr5:29680850-29681080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr5:34922063-34921839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:20974672-20974446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:27403472-27403238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:42747930-42748158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:59443479-59443252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:72150022-72150249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr5:10789906-10789674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr5:59298187-59297956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr5:5035739-5035510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr5:61030457-61030217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr5:58005016-58005264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr5:73252868-73253112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr5:40595230-40594985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr5:41531317-41531050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr5:43474619-43474877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr5:7763845-7764107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr5:19470411-19470156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr5:62826981-62826717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr5:48972363-48972625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr5:12709658-12709927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr5:72310486-72310741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
219, 12
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr5:54064551-54064817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr5:34915914-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr5:27015463-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr5:70050524-70050788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr5:6086790-6086512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr5:3627396-3627096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr5:50729267-50729551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr5:20554977-20554678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr5:54713966-54713656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr5:58229475-58229772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr5:13691804-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr5:27154794-27155095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr5:28926413-28926100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr5:34638657-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr5:47313245-47313556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-315
               

               
Cow position:
               
chr5:45170134-45170444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr5:59438939-59439263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:9090251-9089931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:14141459-14141783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:14746718-14747037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:24348883-24349199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:34528333-34528639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:39094325-39094642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:43990165-43990489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:48519404-48519730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr5:65933156-65932851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr5:73079984-73080299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
204, 12
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr5:33661626-33661941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr5:31469811-31469492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr5:32697041-32696722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr5:34463813-34463477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr5:61839960-61840289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr5:65601232-65601558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr5:46122577-46122248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr5:51999991-52000325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-338
               

               
Cow position:
               
chr5:43738176-43737855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr5:75437125-75436777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr5:26046106-26046433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr5:61488339-61488001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr5:20407891-20407559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr5:58793843-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr5:65588484-65588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr5:15598462-15598113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr5:19813440-19813095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr5:27172189-27171868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
258, 12
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr5:63992392-63992047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr5:28927821-28927462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr5:6683576-6683230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr5:20783400-20783759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr5:27419949-27419584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr5:28946287-28945912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr5:34442020-34441632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr5:49685509-49685127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr5:21040202-21039832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr5:57626581-57626938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr5:25231242-25230865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr5:36854984-36855358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr5:43929962-43929584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-382
               

               
Cow position:
               
chr5:67243696-67244069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr5:37814395-37814780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:4166442-4166801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:26990165-26990547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:44752538-44752150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:46510096-46509707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:50821560-50821946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr5:67212150-67212519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
217, 12
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr5:34300697-34301074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr5:4032217-4031821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr5:50533612-50533221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr5:63987675-63987282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr5:42845828-42845405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr5:43457744-43457344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr5:18702441-18702024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-428
               

               
Cow position:
               
chr5:21524936-21525360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-428
               

               
Cow position:
               
chr5:47704363-47703926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
6-428
               

               
Cow position:
               
chr5:54350589-54350172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr5:4507189-4506761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-434
               

               
Cow position:
               
chr5:50483090-50482653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:28330560-28330134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:38853131-38853558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:39936875-39937324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:41303319-41302869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:56523946-56524369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:61576311-61576754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:61600184-61600614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr5:62870263-62869856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
6-441
               

               
Cow position:
               
chr5:34049881-34050320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr5:30253517-30253953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr5:33414633-33414195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr5:55967111-55966660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr5:72903452-72903027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:59156-58716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:52905719-52905283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:57327560-57328011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:58519627-58519202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:64321520-64321975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr5:68718655-68719081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
225, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:3281603-3282052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:3491973-3492400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:9894355-9893910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:11229902-11229456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:11668406-11667969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:14314294-14314731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:14904295-14903851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:17087258-17086802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:18573942-18574397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:19278920-19278488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:20127826-20128269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:22737877-22738312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:24996452-24996006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:25035455-25035039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:26133302-26132880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:27179426-27179880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:28324117-28324575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:30302670-30303096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:30844884-30845321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:32975779-32975343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:34506154-34505709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:35145124-35145550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:35763062-35763459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:37064865-37065314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:38832889-38833329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:40109273-40109699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:40889512-40889080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:42063975-42064422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:47317196-47316760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:56070625-56071073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:61725742-61726172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:64524108-64523649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:67932689-67932251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr5:74643889-74643469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 15
               

               
Conread position:
               
6-453
               

               
Cow position:
               
chr5:37646780-37646310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr5:17063322-17062854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr5:28302968-28302521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr5:45226052-45225597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr5:66257414-66257862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr5:3771618-3772073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr5:21617227-21617684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr5:64139335-64139789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr5:65776614-65776145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr5:30487020-30487458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr5:57074563-57074097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr5:62172190-62172630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr5:44796946-44796500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr5:60210367-60209911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr5:32339203-32338720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr5:53055781-53055324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr5:26377895-26377442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr5:44994265-44993799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chr5:57935342-57934883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr5:35208033-35208502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
6-471
               

               
Cow position:
               
chr5:43858656-43858176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
6-472
               

               
Cow position:
               
chr5:47601589-47602051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
6-472
               

               
Cow position:
               
chr5:58144834-58144361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr5:41164860-41165332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
6-482
               

               
Cow position:
               
chr5:52165410-52164920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr5:48238318-48238178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr5:14630135-14629965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr5:47888942-47888749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr5:56135196-56134984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr5:23856389-23856176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr5:32963856-32963641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr5:54405122-54404901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr5:21944154-21944395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr5:30816488-30816718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr5:51490981-51490724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr5:64823540-64823244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr5:31145005-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr5:56820487-56820179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
7-320
               

               
Cow position:
               
chr5:42665714-42665405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr5:34183990-34184324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr5:31480926-31481260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr5:15426301-15426663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr5:31640200-31640550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-380
               

               
Cow position:
               
chr5:8821239-8820864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr5:74015713-74016096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr5:16206370-16205997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr5:7193205-7193599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chr5:35684707-35685132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
7-431
               

               
Cow position:
               
chr5:48828920-48829357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
7-436
               

               
Cow position:
               
chr5:1105098-1104670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
7-442
               

               
Cow position:
               
chr5:12352009-12351599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
7-442
               

               
Cow position:
               
chr5:17999723-17999283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
7-443
               

               
Cow position:
               
chr5:45845922-45845476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:29903749-29903328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:39447759-39447310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr5:16894003-16893561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
7-455
               

               
Cow position:
               
chr5:37645846-37646302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
7-468
               

               
Cow position:
               
chr5:72895465-72895925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr5:12672253-12672057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr5:63388568-63388767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr5:26561926-26562155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr5:51357730-51357501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr5:4797537-4797275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr5:58855878-58856213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
8-368
               

               
Cow position:
               
chr5:6045060-6045434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr5:59326054-59325702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr5:54311107-54311488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr5:27103014-27102633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
215, 10
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr5:26094395-26093981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
8-431
               

               
Cow position:
               
chr5:45705821-45706238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
8-441
               

               
Cow position:
               
chr5:26097071-26097502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr5:22243011-22242559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr5:32153542-32153096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr5:43923375-43922956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr5:72035311-72034884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
8-447
               

               
Cow position:
               
chr5:55068490-55068923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
8-468
               

               
Cow position:
               
chr5:29827827-29828289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
8-478
               

               
Cow position:
               
chr5:35826364-35826845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr5:35209697-35209386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr5:52645303-52644968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
9-365
               

               
Cow position:
               
chr5:27306093-27306439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
9-444
               

               
Cow position:
               
chr5:64176346-64175915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
9-469
               

               
Cow position:
               
chr5:5257522-5257049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
10-352
               

               
Cow position:
               
chr5:42744573-42744902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
11-468
               

               
Cow position:
               
chr5:26467394-26467866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr5:48757723-48757939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr5:40152254-40152702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
105, 5
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr5:55145581-55145326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr5:63185471-63185264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
19-324
               

               
Cow position:
               
chr5:33537674-33537962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr5:8024408-8023989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
20-188
               

               
Cow position:
               
chr5:66281008-66280838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr5:62027161-62026954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr5:73222476-73222691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
20-269
               

               
Cow position:
               
chr5:54111703-54111954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
20-273
               

               
Cow position:
               
chr5:27615299-27615561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr5:49362206-49361946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 6
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr5:60126158-60126419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
205, 6
               

               
Conread position:
               
20-327
               

               
Cow position:
               
chr5:741164-740843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
20-329
               

               
Cow position:
               
chr5:63964388-63964066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr5:4617158-4617472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 6
               

               
Conread position:
               
20-341
               

               
Cow position:
               
chr5:27411605-27411290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
20-365
               

               
Cow position:
               
chr5:60715570-60715233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
20-436
               

               
Cow position:
               
chr5:64137036-64137465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr5:2309780-2309343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr5:5201700-5202118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr5:32394384-32394817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
20-458
               

               
Cow position:
               
chr5:65941469-65941020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
20-468
               

               
Cow position:
               
chr5:12323016-12322575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 6
               

               
Conread position:
               
21-276
               

               
Cow position:
               
chr5:7140319-7140060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr5:57271478-57271275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
23-236
               

               
Cow position:
               
chr5:71578961-71579176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
23-444
               

               
Cow position:
               
chr5:3242686-3242280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr5:47547929-47547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
24-325
               

               
Cow position:
               
chr5:29212736-29213033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
24-423
               

               
Cow position:
               
chr5:11427453-11427039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
24-464
               

               
Cow position:
               
chr5:6572539-6572964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
25-190
               

               
Cow position:
               
chr5:31434054-31434220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr5:28229946-28230122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
25-219
               

               
Cow position:
               
chr5:5848398-5848205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-225
               

               
Cow position:
               
chr5:18090516-18090714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr5:72344353-72344138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
25-287
               

               
Cow position:
               
chr5:35235920-35235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-352
               

               
Cow position:
               
chr5:45803849-45804181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
25-368
               

               
Cow position:
               
chr5:41546105-41545755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr5:58320673-58320323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
25-436
               

               
Cow position:
               
chr5:65752645-65753067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr5:16025672-16025268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr5:30276480-30276902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr5:44848228-44847812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
25-444
               

               
Cow position:
               
chr5:48867961-48867532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
25-468
               

               
Cow position:
               
chr5:35969331-35969777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
25-478
               

               
Cow position:
               
chr5:33080999-33080562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
26-204
               

               
Cow position:
               
chr5:69099319-69099501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr5:37366687-37366872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
26-225
               

               
Cow position:
               
chr5:6130142-6130343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr5:43395348-43395109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
26-322
               

               
Cow position:
               
chr5:40039981-40039674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr5:62142460-62142787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr5:57736904-57737241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
26-418
               

               
Cow position:
               
chr5:71494606-71495011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr5:26262884-26262470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
26-452
               

               
Cow position:
               
chr5:15722264-15721867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
26-467
               

               
Cow position:
               
chr5:18898773-18899191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
26-469
               

               
Cow position:
               
chr5:59873616-59873168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
27-198
               

               
Cow position:
               
chr5:12563216-12563043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr5:6575797-6575601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr5:45036812-45037011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr5:37425533-37425733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
27-235
               

               
Cow position:
               
chr5:55821158-55821375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
27-293
               

               
Cow position:
               
chr5:40388075-40387810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr5:16508886-16509200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
27-331
               

               
Cow position:
               
chr5:50637620-50637922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
27-368
               

               
Cow position:
               
chr5:43992116-43992462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
27-377
               

               
Cow position:
               
chr5:72564552-72564910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
27-389
               

               
Cow position:
               
chr5:4710352-4709992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr5:28224245-28224655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr5:56028740-56028332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr5:68604649-68605078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
27-458
               

               
Cow position:
               
chr5:55176677-55177109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
27-458
               

               
Cow position:
               
chr5:56467491-56467904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
27-458
               

               
Cow position:
               
chr5:66366321-66366736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
27-468
               

               
Cow position:
               
chr5:59082402-59081954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr5:50975677-50975878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr5:32956300-32956112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-324
               

               
Cow position:
               
chr5:17027886-17028189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr5:458273-458641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr5:4280255-4280659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr5:69337620-69338029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
28-465
               

               
Cow position:
               
chr5:20779590-20779160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr5:49558960-49559167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr5:32378662-32378909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
220, 25
               

               
Conread position:
               
29-381
               

               
Cow position:
               
chr5:37377668-37378004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
278, 24
               

               
Conread position:
               
29-381
               

               
Cow position:
               
chr5:39258330-39258656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr5:44049495-44049915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr5:51053855-51053433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
30-225
               

               
Cow position:
               
chr5:72845979-72845789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
30-360
               

               
Cow position:
               
chr5:64758972-64758637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
31-270
               

               
Cow position:
               
chr5:8994771-8994525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
32-180
               

               
Cow position:
               
chr5:24837150-24837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr5:35449049-35449312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr5:50943359-50942932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
33-401
               

               
Cow position:
               
chr5:57591486-57591857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:39242390-39242208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
36-297
               

               
Cow position:
               
chr5:2500389-2500112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
39-276
               

               
Cow position:
               
chr5:24485623-24485388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
39-322
               

               
Cow position:
               
chr5:26370501-26370775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
39-362
               

               
Cow position:
               
chr5:56518407-56518093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
39-368
               

               
Cow position:
               
chr5:69731320-69731638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
159, 13
               

               
Conread position:
               
39-444
               

               
Cow position:
               
chr5:45409128-45409540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
40-442
               

               
Cow position:
               
chr5:50599861-50600259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
41-383
               

               
Cow position:
               
chr5:57575570-57575927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
41-443
               

               
Cow position:
               
chr5:34561813-34562223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
41-444
               

               
Cow position:
               
chr5:63647670-63647262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
42-229
               

               
Cow position:
               
chr5:1678204-1678392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
42-330
               

               
Cow position:
               
chr5:8163018-8162717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
42-388
               

               
Cow position:
               
chr5:23169013-23168669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
43-341
               

               
Cow position:
               
chr5:22643411-22643121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
44-194
               

               
Cow position:
               
chr5:50870349-50870505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
44-445
               

               
Cow position:
               
chr5:74003820-74003436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr5:66403955-66404211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr5:50215747-50215414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
49-423
               

               
Cow position:
               
chr5:69461146-69461529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
49-431
               

               
Cow position:
               
chr5:52040508-52040119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr5:74610880-74610493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
49-443
               

               
Cow position:
               
chr5:48010035-48009667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
49-444
               

               
Cow position:
               
chr5:4322222-4322628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
49-444
               

               
Cow position:
               
chr5:7044899-7044491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 338
               

               
Conread position:
               
49-464
               

               
Cow position:
               
chr5:4220792-4221211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 197
               

               
Conread position:
               
51-458
               

               
Cow position:
               
chr5:65136097-65136487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr5:6670383-6670121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr5:6286612-6286257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
52-444
               

               
Cow position:
               
chr5:46512952-46512553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 267
               

               
Conread position:
               
53-194
               

               
Cow position:
               
chr5:75828920-75828777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
53-225
               

               
Cow position:
               
chr5:17644840-17644665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
53-388
               

               
Cow position:
               
chr5:61810608-61810930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
53-442
               

               
Cow position:
               
chr5:52667845-52668252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
54-368
               

               
Cow position:
               
chr5:37808848-37808525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 59
               

               
Conread position:
               
54-443
               

               
Cow position:
               
chr5:5855696-5856074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 43
               

               
Conread position:
               
55-204
               

               
Cow position:
               
chr5:57576031-57576185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
55-385
               

               
Cow position:
               
chr5:47323268-47323617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 231
               

               
Conread position:
               
55-418
               

               
Cow position:
               
chr5:17768326-17767963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chr5:71722879-71723176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
56-448
               

               
Cow position:
               
chr5:34977021-34976620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr5:42705083-42705301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
5, 133
               

               
Conread position:
               
59-393
               

               
Cow position:
               
chr5:51151541-51151191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
59-449
               

               
Cow position:
               
chr5:41713131-41713509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
59-478
               

               
Cow position:
               
chr5:44028480-44028058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
60-324
               

               
Cow position:
               
chr5:7552596-7552322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 205
               

               
Conread position:
               
61-318
               

               
Cow position:
               
chr5:2262550-2262287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 192
               

               
Conread position:
               
61-331
               

               
Cow position:
               
chr5:51935006-51935290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 263
               

               
Conread position:
               
61-341
               

               
Cow position:
               
chr5:55928766-55929055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
62-234
               

               
Cow position:
               
chr5:6219929-6220103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
62-237
               

               
Cow position:
               
chr5:43816786-43816608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr5:69520715-69520985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
62-341
               

               
Cow position:
               
chr5:62638730-62639015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 180
               

               
Conread position:
               
62-423
               

               
Cow position:
               
chr5:45472090-45472473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
62-444
               

               
Cow position:
               
chr5:19778759-19778351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 205
               

               
Conread position:
               
62-444
               

               
Cow position:
               
chr5:59631306-59631702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
63-204
               

               
Cow position:
               
chr5:45026092-45025949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
63-237
               

               
Cow position:
               
chr5:29980160-29979985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
63-444
               

               
Cow position:
               
chr5:17371876-17371480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
64-381
               

               
Cow position:
               
chr5:45574452-45574772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
64-430
               

               
Cow position:
               
chr5:1987443-1987819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
64-444
               

               
Cow position:
               
chr5:3549951-3549590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
207, 49
               

               
Conread position:
               
64-465
               

               
Cow position:
               
chr5:19335967-19335541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 345
               

               
Conread position:
               
65-298
               

               
Cow position:
               
chr5:21964119-21964357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
65-350
               

               
Cow position:
               
chr5:59115208-59115500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 231
               

               
Conread position:
               
67-272
               

               
Cow position:
               
chr5:40169357-40169146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
67-322
               

               
Cow position:
               
chr5:279319-279059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
67-444
               

               
Cow position:
               
chr5:30178681-30178287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
67-468
               

               
Cow position:
               
chr5:56014564-56014958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
68-444
               

               
Cow position:
               
chr5:30092800-30092413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 289
               

               
Conread position:
               
68-447
               

               
Cow position:
               
chr5:74580623-74581004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
72-368
               

               
Cow position:
               
chr5:56317129-56317427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
72-436
               

               
Cow position:
               
chr5:64697615-64697995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
72-444
               

               
Cow position:
               
chr5:41010162-41009795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
72-446
               

               
Cow position:
               
chr5:30629323-30628936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
72-458
               

               
Cow position:
               
chr5:65967897-65967503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
73-389
               

               
Cow position:
               
chr5:14629980-14629647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 315
               

               
Conread position:
               
74-388
               

               
Cow position:
               
chr5:54060110-54060435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
74-458
               

               
Cow position:
               
chr5:16214524-16214912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
75-448
               

               
Cow position:
               
chr5:57768135-57767764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
77-444
               

               
Cow position:
               
chr5:66581803-66582185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 170
               

               
Conread position:
               
79-486
               

               
Cow position:
               
chr5:55232951-55232570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
269, 96
               

               
Conread position:
               
80-444
               

               
Cow position:
               
chr5:54048506-54048135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
84-444
               

               
Cow position:
               
chr5:56877335-56877685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
85-384
               

               
Cow position:
               
chr5:46426003-46425701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
85-443
               

               
Cow position:
               
chr5:45397426-45397779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
85-444
               

               
Cow position:
               
chr5:35247263-35246892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr5:55186069-55185889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
87-331
               

               
Cow position:
               
chr5:61809834-61809585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 5
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr5:30950065-30949756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr5:3582422-3582770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr5:7057550-7057182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr5:35459445-35459081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr5:39333688-39333314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
87-457
               

               
Cow position:
               
chr5:12673610-12673252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
87-459
               

               
Cow position:
               
chr5:55955760-55956140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
88-393
               

               
Cow position:
               
chr5:19523742-19524066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
88-444
               

               
Cow position:
               
chr5:12761265-12760905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
92-330
               

               
Cow position:
               
chr5:63865650-63865896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
92-331
               

               
Cow position:
               
chr5:65883921-65883671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
92-371
               

               
Cow position:
               
chr5:20422324-20422052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
92-375
               

               
Cow position:
               
chr5:39874980-39875269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
92-422
               

               
Cow position:
               
chr5:61830010-61829677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr5:66972282-66972645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 329
               

               
Conread position:
               
92-445
               

               
Cow position:
               
chr5:70952021-70951677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 201
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr5:42050406-42050781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
93-444
               

               
Cow position:
               
chr5:47696583-47696245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
94-467
               

               
Cow position:
               
chr5:42670998-42670635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
96-431
               

               
Cow position:
               
chr5:64027149-64026813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
97-320
               

               
Cow position:
               
chr5:67540343-67540111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
97-409
               

               
Cow position:
               
chr5:7755702-7755383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
97-448
               

               
Cow position:
               
chr5:57101916-57101573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr5:23529412-23529135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
99-443
               

               
Cow position:
               
chr5:72951701-72952038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 236
               

               
Conread position:
               
100-444
               

               
Cow position:
               
chr5:73168135-73167799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
101-233
               

               
Cow position:
               
chr5:19294622-19294491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
101-275
               

               
Cow position:
               
chr5:7921536-7921359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
102-269
               

               
Cow position:
               
chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
102-389
               

               
Cow position:
               
chr5:64592227-64591935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 94
               

               
Conread position:
               
103-442
               

               
Cow position:
               
chr5:18288995-18289331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
103-442
               

               
Cow position:
               
chr5:44447002-44446662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 277
               

               
Conread position:
               
103-468
               

               
Cow position:
               
chr5:991332-991713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
104-444
               

               
Cow position:
               
chr5:22666960-22667285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
105-381
               

               
Cow position:
               
chr5:45273633-45273352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 235
               

               
Conread position:
               
105-389
               

               
Cow position:
               
chr5:54768042-54767751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
106-325
               

               
Cow position:
               
chr5:33552539-33552328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
106-381
               

               
Cow position:
               
chr5:63427137-63426853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 235
               

               
Conread position:
               
106-444
               

               
Cow position:
               
chr5:33560865-33560523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr5:44726456-44726178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
108-444
               

               
Cow position:
               
chr5:41227113-41226789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
109-380
               

               
Cow position:
               
chr5:58490589-58490884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
109-381
               

               
Cow position:
               
chr5:60599308-60599053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
109-444
               

               
Cow position:
               
chr5:49474670-49474339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr5:60747403-60747186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 180
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr5:57419912-57419586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr5:31475562-31475897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 249
               

               
Conread position:
               
116-467
               

               
Cow position:
               
chr5:12557410-12557048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
118-381
               

               
Cow position:
               
chr5:49440991-49440724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
123-448
               

               
Cow position:
               
chr5:60016053-60016383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 180
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr5:37893222-37893426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
125-383
               

               
Cow position:
               
chr5:41293970-41294235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
126-443
               

               
Cow position:
               
chr5:53946786-53947113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 225
               

               
Conread position:
               
127-381
               

               
Cow position:
               
chr5:54375615-54375352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 167
               

               
Conread position:
               
129-380
               

               
Cow position:
               
chr5:62378685-62378929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
149, 108
               

               
Conread position:
               
130-324
               

               
Cow position:
               
chr5:56635795-56635989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
130-331
               

               
Cow position:
               
chr5:35125949-35126156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
130-380
               

               
Cow position:
               
chr5:7697900-7698151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
196, 192
               

               
Conread position:
               
130-384
               

               
Cow position:
               
chr5:13717676-13717422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
130-413
               

               
Cow position:
               
chr5:60183696-60183984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
95, 249
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr5:12434430-12434750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr5:14921035-14920711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr5:17555132-17554820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
130-465
               

               
Cow position:
               
chr5:43371303-43370958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr5:58446700-58446956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr5:12901812-12902134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr5:36039107-36038790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr5:73418382-73418129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
233, 22
               

               
Conread position:
               
135-444
               

               
Cow position:
               
chr5:50575685-50575984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 197
               

               
Conread position:
               
137-442
               

               
Cow position:
               
chr5:33833947-33834253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
137-444
               

               
Cow position:
               
chr5:57527015-57526712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
231, 11
               

               
Conread position:
               
138-388
               

               
Cow position:
               
chr5:55019196-55019450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
138-440
               

               
Cow position:
               
chr5:56548481-56548777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
138-444
               

               
Cow position:
               
chr5:30232802-30233125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 209
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr5:1087288-1087043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr5:35976429-35976709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr5:17602281-17602015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
152-444
               

               
Cow position:
               
chr5:43402817-43403124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
155-443
               

               
Cow position:
               
chr5:66551979-66551678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
157-368
               

               
Cow position:
               
chr5:69636157-69636362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
157-444
               

               
Cow position:
               
chr5:19752227-19752516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
157-468
               

               
Cow position:
               
chr5:61914492-61914808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
159-416
               

               
Cow position:
               
chr5:30805092-30805345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
163-444
               

               
Cow position:
               
chr5:6439105-6438810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
164-443
               

               
Cow position:
               
chr5:63234897-63234609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
168-444
               

               
Cow position:
               
chr5:30247590-30247310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
168-444
               

               
Cow position:
               
chr5:64555462-64555746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 183
               

               
Conread position:
               
172-364
               

               
Cow position:
               
chr5:26150484-26150290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr5:59627036-59626757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
174-388
               

               
Cow position:
               
chr5:45420195-45419982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 186
               

               
Conread position:
               
175-454
               

               
Cow position:
               
chr5:60523676-60523954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
177-467
               

               
Cow position:
               
chr5:61455787-61456080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
179-388
               

               
Cow position:
               
chr5:56339074-56338862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
181-458
               

               
Cow position:
               
chr5:28814991-28814717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
184, 54
               

               
Conread position:
               
188-442
               

               
Cow position:
               
chr5:70678687-70678432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
189-444
               

               
Cow position:
               
chr5:63192788-63192539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
191-441
               

               
Cow position:
               
chr5:72006537-72006285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 200
               

               
Conread position:
               
197-396
               

               
Cow position:
               
chr5:35982779-35982571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 182
               

               
Conread position:
               
197-443
               

               
Cow position:
               
chr5:31052347-31052602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 220
               

               
Conread position:
               
197-444
               

               
Cow position:
               
chr5:20288302-20288043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
199-444
               

               
Cow position:
               
chr5:26549178-26548928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
199-459
               

               
Cow position:
               
chr5:51065495-51065745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
202-397
               

               
Cow position:
               
chr5:24069365-24069551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
202-439
               

               
Cow position:
               
chr5:73253382-73253615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
202-442
               

               
Cow position:
               
chr5:66466285-66466526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
216-444
               

               
Cow position:
               
chr5:57062544-57062313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
218-485
               

               
Cow position:
               
chr5:45187128-45186861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
219-444
               

               
Cow position:
               
chr5:17104842-17105060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr5:34915064-34914827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr5:39035771-39036011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
220-390
               

               
Cow position:
               
chr5:9234000-9233831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
220-442
               

               
Cow position:
               
chr5:46541065-46540847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
220-444
               

               
Cow position:
               
chr5:69099710-69099934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr5:66530910-66531099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
221-427
               

               
Cow position:
               
chr5:57686747-57686543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr5:49501832-49501604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
221-483
               

               
Cow position:
               
chr5:4267662-4267915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
225, 8
               

               
Conread position:
               
222-458
               

               
Cow position:
               
chr5:69383247-69383480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
223-444
               

               
Cow position:
               
chr5:48867471-48867255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
223-444
               

               
Cow position:
               
chr5:49342056-49341820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
224-442
               

               
Cow position:
               
chr5:50824586-50824796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
226-444
               

               
Cow position:
               
chr5:52852966-52853182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
226-491
               

               
Cow position:
               
chr5:60515031-60514767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
227-444
               

               
Cow position:
               
chr5:33273693-33273912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
229-423
               

               
Cow position:
               
chr5:38168893-38169087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 146
               

               
Conread position:
               
241-423
               

               
Cow position:
               
chr5:51247120-51246938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
242-444
               

               
Cow position:
               
chr5:2240977-2240774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
243-440
               

               
Cow position:
               
chr5:60948146-60948343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
243-442
               

               
Cow position:
               
chr5:51298699-51298502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
243-448
               

               
Cow position:
               
chr5:55942366-55942158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
243-454
               

               
Cow position:
               
chr5:46704286-46704078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr5:26147606-26147837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
246-442
               

               
Cow position:
               
chr5:26167437-26167633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-444
               

               
Cow position:
               
chr5:57497410-57497211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
253-458
               

               
Cow position:
               
chr5:74039980-74039777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr5:35190134-35190319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
254-444
               

               
Cow position:
               
chr5:37842255-37842064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
254-457
               

               
Cow position:
               
chr5:44722488-44722283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
261-426
               

               
Cow position:
               
chr5:6086312-6086144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
261-442
               

               
Cow position:
               
chr5:54312632-54312814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr5:15991608-15991430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr5:34288219-34288039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
261-448
               

               
Cow position:
               
chr5:16668728-16668912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
265-444
               

               
Cow position:
               
chr5:3817652-3817472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
266-444
               

               
Cow position:
               
chr5:1694052-1693877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
268-442
               

               
Cow position:
               
chr5:35394395-35394226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
272-444
               

               
Cow position:
               
chr5:6876926-6876750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr5:29599493-29599337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr5:34918399-34918558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr5:37253482-37253638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr5:60207761-60207920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
283-461
               

               
Cow position:
               
chr5:52192376-52192198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
160, 83
               

               
Conread position:
               
283-470
               

               
Cow position:
               
chr5:49207274-49207088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
286-465
               

               
Cow position:
               
chr5:34787630-34787810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
160, 88
               

               
Conread position:
               
286-467
               

               
Cow position:
               
chr5:21721414-21721231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
288-470
               

               
Cow position:
               
chr5:66287003-66287184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
290-458
               

               
Cow position:
               
chr5:9559481-9559642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
292-459
               

               
Cow position:
               
chr5:4981512-4981675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
295-469
               

               
Cow position:
               
chr5:6245598-6245425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
300-444
               

               
Cow position:
               
chr5:47960191-47960049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
304-467
               

               
Cow position:
               
chr5:19626652-19626820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 70
               

               
Conread position:
               
316-444
               

               
Cow position:
               
chr5:74049910-74050039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.