Cow genome map

Conread name: Ss1.1-Pig2-93B09.5

Conread position: 1-214
Cow position: chrX:25411609-25411821 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 7

Conread position: 1-226
Cow position: chrX:25232359-25232583 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 132, 7

Conread position: 1-442
Cow position: chrX:9360652-9361099 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 295
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 7

Conread position: 2-241
Cow position: chrX:25452319-25452557 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 8

Conread position: 2-453
Cow position: chrX:44396784-44397239 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 17

Conread position: 4-219
Cow position: chrX:48684452-48684239 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 14

Conread position: 5-169
Cow position: chrX:48536893-48536727 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 12

Conread position: 5-198
Cow position: chrX:4123607-4123802 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 13

Conread position: 5-218
Cow position: chrX:7425236-7425453 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 34

Conread position: 5-322
Cow position: chrX:6655495-6655170 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 13

Conread position: 5-443
Cow position: chrX:30133552-30133108 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 294
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 61, 16

Conread position: 6-114
Cow position: chrX:33205219-33205114 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 6-146
Cow position: chrX:6607194-6607335 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 12

Conread position: 6-146
Cow position: chrX:7382096-7382235 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 12

Conread position: 6-146
Cow position: chrX:45787427-45787563 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 6-149
Cow position: chrX:26619590-26619446 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 10

Conread position: 6-150
Cow position: chrX:2523957-2523809 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 90, 12

Conread position: 6-150
Cow position: chrX:29049743-29049880 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 12

Conread position: 6-177
Cow position: chrX:18812031-18812196 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 15

Conread position: 6-184
Cow position: chrX:42855181-42855365 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 12

Conread position: 6-185
Cow position: chrX:23970162-23970335 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 13

Conread position: 6-186
Cow position: chrX:6639897-6640082 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 12

Conread position: 6-190
Cow position: chrX:36778179-36778368 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 12

Conread position: 6-192
Cow position: chrX:877250-877070 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 15

Conread position: 6-192
Cow position: chrX:9855073-9855263 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 12

Conread position: 6-192
Cow position: chrX:9953914-9954104 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 12

Conread position: 6-195
Cow position: chrX:2206771-2206589 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 138, 12

Conread position: 6-205
Cow position: chrX:31260857-31260656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 86, 12

Conread position: 6-207
Cow position: chrX:4482735-4482941 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 12

Conread position: 6-208
Cow position: chrX:9416920-9416719 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 12

Conread position: 6-214
Cow position: chrX:38967423-38967628 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 12

Conread position: 6-215
Cow position: chrX:33020259-33020465 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 123, 12

Conread position: 6-219
Cow position: chrX:41167191-41166979 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 12

Conread position: 6-225
Cow position: chrX:2383262-2383480 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 12

Conread position: 6-225
Cow position: chrX:12115811-12116037 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 12

Conread position: 6-225
Cow position: chrX:32743311-32743526 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 129, 12

Conread position: 6-226
Cow position: chrX:160260-160040 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 17

Conread position: 6-226
Cow position: chrX:678795-678580 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 17

Conread position: 6-226
Cow position: chrX:29032190-29032402 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 164, 12

Conread position: 6-226
Cow position: chrX:44053031-44053250 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 12

Conread position: 6-228
Cow position: chrX:19015215-19015427 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 86, 13

Conread position: 6-229
Cow position: chrX:25419388-25419162 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 12

Conread position: 6-230
Cow position: chrX:47757156-47756932 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 12

Conread position: 6-231
Cow position: chrX:12018048-12018289 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 13

Conread position: 6-234
Cow position: chrX:1728644-1728428 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 12

Conread position: 6-234
Cow position: chrX:1946948-1946711 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 12

Conread position: 6-234
Cow position: chrX:11806244-11806013 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 15

Conread position: 6-234
Cow position: chrX:14924773-14925001 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 132, 12

Conread position: 6-235
Cow position: chrX:10302109-10302338 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 47

Conread position: 6-235
Cow position: chrX:11561927-11562157 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 12

Conread position: 6-235
Cow position: chrX:23572027-23571795 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 12

Conread position: 6-235
Cow position: chrX:35409441-35409658 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 12

Conread position: 6-235
Cow position: chrX:35681118-35681342 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 12

Conread position: 6-236
Cow position: chrX:2029163-2029395 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 12

Conread position: 6-237
Cow position: chrX:16289789-16289554 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 12

Conread position: 6-242
Cow position: chrX:42339163-42338936 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 221, 12

Conread position: 6-245
Cow position: chrX:35609759-35609998 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 19

Conread position: 6-248
Cow position: chrX:16790064-16789836 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 12

Conread position: 6-248
Cow position: chrX:45412882-45412642 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 119, 12

Conread position: 6-262
Cow position: chrX:10306443-10306708 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 91, 12

Conread position: 6-262
Cow position: chrX:43983944-43984210 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 6-264
Cow position: chrX:37048808-37048546 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 106, 12

Conread position: 6-269
Cow position: chrX:14900948-14900690 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 12

Conread position: 6-269
Cow position: chrX:42994387-42994653 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 94, 12

Conread position: 6-276
Cow position: chrX:28845619-28845880 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 148, 12

Conread position: 6-281
Cow position: chrX:40788977-40789264 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 12

Conread position: 6-282
Cow position: chrX:40647751-40648039 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 107, 12

Conread position: 6-282
Cow position: chrX:41198877-41199159 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 12

Conread position: 6-285
Cow position: chrX:42874751-42875039 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 12

Conread position: 6-287
Cow position: chrX:2104178-2104463 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 12

Conread position: 6-288
Cow position: chrX:7718626-7718908 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 10

Conread position: 6-293
Cow position: chrX:19188709-19188995 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 88, 15

Conread position: 6-293
Cow position: chrX:34192450-34192734 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 12

Conread position: 6-297
Cow position: chrX:34990814-34991103 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 125, 12

Conread position: 6-299
Cow position: chrX:26876108-26875811 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-314
Cow position: chrX:35288433-35288738 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 191, 12

Conread position: 6-316
Cow position: chrX:17541737-17542047 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 15

Conread position: 6-320
Cow position: chrX:26441007-26440694 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 6-322
Cow position: chrX:4905216-4904894 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 12

Conread position: 6-322
Cow position: chrX:11856202-11856523 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-322
Cow position: chrX:21785540-21785867 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 15

Conread position: 6-322
Cow position: chrX:27106031-27106352 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 12

Conread position: 6-322
Cow position: chrX:29066214-29066531 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 12

Conread position: 6-322
Cow position: chrX:35240637-35240958 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 12

Conread position: 6-322
Cow position: chrX:41103561-41103887 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 12

Conread position: 6-323
Cow position: chrX:19689991-19690309 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 91, 12

Conread position: 6-324
Cow position: chrX:43527276-43527603 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 125, 15

Conread position: 6-324
Cow position: chrX:45113401-45113714 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 12

Conread position: 6-325
Cow position: chrX:2467652-2467980 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 12

Conread position: 6-325
Cow position: chrX:37843493-37843813 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 15

Conread position: 6-329
Cow position: chrX:27176547-27176213 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 218
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 128, 12

Conread position: 6-331
Cow position: chrX:1514631-1514317 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 22

Conread position: 6-331
Cow position: chrX:15329426-15329744 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 12

Conread position: 6-331
Cow position: chrX:27680176-27680500 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 12

Conread position: 6-331
Cow position: chrX:28134119-28134440 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 12

Conread position: 6-331
Cow position: chrX:38227317-38227007 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 125, 12

Conread position: 6-335
Cow position: chrX:10428312-10428651 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 12

Conread position: 6-336
Cow position: chrX:7646031-7646358 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 6-338
Cow position: chrX:17631029-17630692 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 125, 13

Conread position: 6-338
Cow position: chrX:18695148-18694822 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 12

Conread position: 6-338
Cow position: chrX:26625904-26625562 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 12

Conread position: 6-341
Cow position: chrX:3130354-3130684 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 17

Conread position: 6-341
Cow position: chrX:7508912-7509251 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 12

Conread position: 6-341
Cow position: chrX:10412213-10411874 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 87, 12

Conread position: 6-341
Cow position: chrX:17964749-17964410 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 12

Conread position: 6-341
Cow position: chrX:21004457-21004796 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 91, 19

Conread position: 6-341
Cow position: chrX:23514245-23513905 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 6-341
Cow position: chrX:25337952-25338299 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 12

Conread position: 6-341
Cow position: chrX:32431400-32431736 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 15

Conread position: 6-341
Cow position: chrX:45404061-45403713 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 12

Conread position: 6-341
Cow position: chrX:46722968-46722622 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 91, 12

Conread position: 6-341
Cow position: chrX:47967372-47967719 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 12

Conread position: 6-342
Cow position: chrX:16783267-16783604 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 12

Conread position: 6-343
Cow position: chrX:20697835-20697495 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 85, 12

Conread position: 6-355
Cow position: chrX:37232182-37232533 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 13

Conread position: 6-355
Cow position: chrX:39558575-39558223 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 12

Conread position: 6-356
Cow position: chrX:42171526-42171169 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 6-365
Cow position: chrX:917596-917232 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 91, 12

Conread position: 6-368
Cow position: chrX:17662824-17662459 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 6-372
Cow position: chrX:43567712-43568062 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 221, 12

Conread position: 6-378
Cow position: chrX:42470164-42469792 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 12

Conread position: 6-379
Cow position: chrX:15814870-15815236 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 12

Conread position: 6-380
Cow position: chrX:7513289-7513636 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-380
Cow position: chrX:17888633-17888273 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 128, 13

Conread position: 6-380
Cow position: chrX:35388134-35387774 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-380
Cow position: chrX:45414527-45414155 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-381
Cow position: chrX:11073418-11073038 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 6-381
Cow position: chrX:40557903-40557525 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 12

Conread position: 6-385
Cow position: chrX:29289349-29289732 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 12

Conread position: 6-388
Cow position: chrX:619235-618850 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 12

Conread position: 6-388
Cow position: chrX:5017635-5017263 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 12

Conread position: 6-388
Cow position: chrX:17725751-17726136 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-388
Cow position: chrX:27394241-27393866 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 12

Conread position: 6-388
Cow position: chrX:38006995-38006610 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 6-388
Cow position: chrX:40269249-40269650 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 12

Conread position: 6-389
Cow position: chrX:8797021-8797410 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-389
Cow position: chrX:33493548-33493936 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 6-389
Cow position: chrX:33639744-33640136 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 12

Conread position: 6-396
Cow position: chrX:878598-878214 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 12

Conread position: 6-396
Cow position: chrX:5872086-5872483 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 86, 12

Conread position: 6-396
Cow position: chrX:41884645-41884246 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 6-410
Cow position: chrX:16416281-16416686 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 12

Conread position: 6-417
Cow position: chrX:28866219-28865814 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 205, 12

Conread position: 6-431
Cow position: chrX:8899797-8900223 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 12

Conread position: 6-431
Cow position: chrX:11844468-11844036 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 17

Conread position: 6-436
Cow position: chrX:31294769-31294360 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-436
Cow position: chrX:31949158-31948725 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 12

Conread position: 6-436
Cow position: chrX:35542664-35543093 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-436
Cow position: chrX:36975722-36976161 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 12

Conread position: 6-436
Cow position: chrX:47873568-47873127 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 279
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 12

Conread position: 6-437
Cow position: chrX:21672324-21672772 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-439
Cow position: chrX:12309616-12309173 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 6-439
Cow position: chrX:32309879-32310323 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 291
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 12

Conread position: 6-440
Cow position: chrX:21593056-21593504 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 312
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 12

Conread position: 6-441
Cow position: chrX:17231507-17231951 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 139, 12

Conread position: 6-441
Cow position: chrX:47344067-47344513 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 12

Conread position: 6-442
Cow position: chrX:27705366-27705802 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 301
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 125, 12

Conread position: 6-442
Cow position: chrX:42381327-42380897 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 12

Conread position: 6-442
Cow position: chrX:47249015-47248582 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 10

Conread position: 6-443
Cow position: chrX:4633078-4632638 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 12

Conread position: 6-443
Cow position: chrX:8730852-8731310 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 12

Conread position: 6-443
Cow position: chrX:9201320-9201759 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 12

Conread position: 6-443
Cow position: chrX:10866094-10865654 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 84, 12

Conread position: 6-443
Cow position: chrX:15596811-15597244 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 294
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 12

Conread position: 6-443
Cow position: chrX:23564024-23563574 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 6-443
Cow position: chrX:27514641-27515075 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 294
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 89, 12

Conread position: 6-443
Cow position: chrX:31436253-31436685 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 6-443
Cow position: chrX:34441677-34441237 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-443
Cow position: chrX:38549221-38549662 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 17

Conread position: 6-444
Cow position: chrX:151674-152122 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 112, 12

Conread position: 6-444
Cow position: chrX:4269295-4268853 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 300
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 12

Conread position: 6-444
Cow position: chrX:5638396-5637962 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 12

Conread position: 6-444
Cow position: chrX:8925476-8925897 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 12

Conread position: 6-444
Cow position: chrX:9252405-9251946 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 6-444
Cow position: chrX:11939151-11938736 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 12

Conread position: 6-444
Cow position: chrX:12249578-12250032 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 307
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:15485855-15485416 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 291
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 123, 12

Conread position: 6-444
Cow position: chrX:23497890-23497480 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 6-444
Cow position: chrX:25035614-25035164 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-444
Cow position: chrX:26492775-26493224 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 298
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 94, 15

Conread position: 6-444
Cow position: chrX:27509247-27508807 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 12

Conread position: 6-444
Cow position: chrX:28632707-28632265 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 286
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 121, 10

Conread position: 6-444
Cow position: chrX:30963099-30962658 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:31250165-31250607 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 12

Conread position: 6-444
Cow position: chrX:32020349-32019916 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:33855460-33855009 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 12

Conread position: 6-444
Cow position: chrX:34543560-34544003 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:34565070-34565502 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:38094752-38094309 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 6-444
Cow position: chrX:38935054-38935496 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 302
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 17

Conread position: 6-444
Cow position: chrX:38963882-38964314 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 6-444
Cow position: chrX:40826974-40826533 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-444
Cow position: chrX:41238590-41238145 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 125, 15

Conread position: 6-444
Cow position: chrX:42086635-42087043 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 11

Conread position: 6-444
Cow position: chrX:46032945-46032511 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 291
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 12

Conread position: 6-444
Cow position: chrX:46532736-46532273 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 315
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 89, 12

Conread position: 6-444
Cow position: chrX:48010367-48010822 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 292
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 105, 12

Conread position: 6-447
Cow position: chrX:15545670-15546101 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 308
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 12

Conread position: 6-454
Cow position: chrX:4768523-4768956 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 214, 12

Conread position: 6-454
Cow position: chrX:17794758-17795208 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 12

Conread position: 6-456
Cow position: chrX:45967935-45968377 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 227, 12

Conread position: 6-458
Cow position: chrX:9651273-9650796 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 12

Conread position: 6-458
Cow position: chrX:15147413-15146968 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-458
Cow position: chrX:30921958-30922403 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 89, 12

Conread position: 6-458
Cow position: chrX:34238494-34238955 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 310
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 12

Conread position: 6-458
Cow position: chrX:35268663-35269089 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 337, 12

Conread position: 6-458
Cow position: chrX:35413405-35413825 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 303
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 185, 12

Conread position: 6-458
Cow position: chrX:38642033-38642475 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 6-458
Cow position: chrX:45430244-45429799 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 15

Conread position: 6-462
Cow position: chrX:45501921-45502378 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 6-464
Cow position: chrX:20340118-20339659 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 6-464
Cow position: chrX:41879158-41878701 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 6-466
Cow position: chrX:22482916-22482450 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 6-468
Cow position: chrX:6544029-6544485 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 15

Conread position: 6-468
Cow position: chrX:7351072-7351544 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 324
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 91, 12

Conread position: 6-468
Cow position: chrX:27446461-27446927 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 12

Conread position: 6-469
Cow position: chrX:3654377-3654845 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 310
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 88, 12

Conread position: 6-469
Cow position: chrX:25816123-25815653 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 6-490
Cow position: chrX:27432146-27431659 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 7-214
Cow position: chrX:19930430-19930631 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 11

Conread position: 7-226
Cow position: chrX:17497870-17498075 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 7-226
Cow position: chrX:28097899-28098104 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 7-226
Cow position: chrX:30162771-30162989 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 11

Conread position: 7-235
Cow position: chrX:20582804-20583021 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 109, 11

Conread position: 7-235
Cow position: chrX:41743687-41743915 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 11

Conread position: 7-239
Cow position: chrX:25237951-25238177 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 124, 11

Conread position: 7-259
Cow position: chrX:40116199-40116447 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 11

Conread position: 7-341
Cow position: chrX:7571680-7572017 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 11

Conread position: 7-341
Cow position: chrX:28111280-28111621 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 11

Conread position: 7-341
Cow position: chrX:48195267-48194923 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 12

Conread position: 7-368
Cow position: chrX:5900231-5900601 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 90, 11

Conread position: 7-381
Cow position: chrX:6690474-6690109 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 11

Conread position: 7-381
Cow position: chrX:11082839-11082475 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 11

Conread position: 7-388
Cow position: chrX:13382098-13382481 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 89, 16

Conread position: 7-388
Cow position: chrX:28878388-28878013 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 11

Conread position: 7-388
Cow position: chrX:34401771-34402164 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 7-443
Cow position: chrX:16762545-16762984 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 124, 11

Conread position: 7-444
Cow position: chrX:7721758-7722191 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 7-444
Cow position: chrX:11655860-11656295 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 7-444
Cow position: chrX:12290509-12290935 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 213, 11

Conread position: 7-444
Cow position: chrX:12437465-12437066 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 216, 11

Conread position: 7-444
Cow position: chrX:22812836-22813282 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 7-444
Cow position: chrX:27442781-27442321 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 93, 14

Conread position: 7-444
Cow position: chrX:37072180-37072603 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 7-444
Cow position: chrX:40183576-40183137 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 11

Conread position: 7-451
Cow position: chrX:15007377-15006933 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 7-458
Cow position: chrX:22074574-22075026 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 11

Conread position: 8-136
Cow position: chrX:33538723-33538847 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 8-181
Cow position: chrX:42499254-42499077 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 10

Conread position: 8-207
Cow position: chrX:44731369-44731571 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 10

Conread position: 8-208
Cow position: chrX:9997558-9997361 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 10

Conread position: 8-214
Cow position: chrX:29509669-29509461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 8

Conread position: 8-226
Cow position: chrX:4750523-4750312 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 10

Conread position: 8-228
Cow position: chrX:38840663-38840883 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 10

Conread position: 8-229
Cow position: chrX:25571221-25571001 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 10

Conread position: 8-230
Cow position: chrX:7362078-7361865 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 11

Conread position: 8-230
Cow position: chrX:38439248-38439474 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 11

Conread position: 8-255
Cow position: chrX:24105401-24105643 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 10

Conread position: 8-276
Cow position: chrX:15139770-15139500 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 123, 10

Conread position: 8-276
Cow position: chrX:40452438-40452171 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 10

Conread position: 8-316
Cow position: chrX:20709846-20710161 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 76, 10

Conread position: 8-322
Cow position: chrX:37836361-37836671 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 10

Conread position: 8-331
Cow position: chrX:45089218-45089548 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 90, 13

Conread position: 8-341
Cow position: chrX:38936476-38936812 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 123, 15

Conread position: 8-341
Cow position: chrX:43049117-43049443 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 13

Conread position: 8-388
Cow position: chrX:34502695-34503078 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 8-423
Cow position: chrX:13648009-13647588 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 13

Conread position: 8-431
Cow position: chrX:46771197-46770758 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 99, 11

Conread position: 8-436
Cow position: chrX:22821822-22822264 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 89, 15

Conread position: 8-441
Cow position: chrX:37119374-37119789 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 292
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 10

Conread position: 8-442
Cow position: chrX:754733-755158 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 290
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 10

Conread position: 8-442
Cow position: chrX:14884187-14883742 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 10

Conread position: 8-442
Cow position: chrX:47211075-47210621 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 289
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 10

Conread position: 8-444
Cow position: chrX:4996386-4996806 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 123, 10

Conread position: 8-444
Cow position: chrX:20151625-20152065 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 306
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 121, 10

Conread position: 8-444
Cow position: chrX:21642703-21642264 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 294
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 97, 10

Conread position: 8-444
Cow position: chrX:21663084-21663512 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 296
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 85, 10

Conread position: 8-444
Cow position: chrX:34376732-34377156 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 10

Conread position: 8-444
Cow position: chrX:44054576-44055020 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 8-444
Cow position: chrX:44961522-44961972 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 291
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 10

Conread position: 8-468
Cow position: chrX:1465962-1466403 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 10

Conread position: 8-468
Cow position: chrX:42247409-42246939 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 11

Conread position: 9-192
Cow position: chrX:7806153-7806338 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 9

Conread position: 9-308
Cow position: chrX:11589816-11589509 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 9

Conread position: 9-331
Cow position: chrX:630532-630208 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 9

Conread position: 9-444
Cow position: chrX:9635405-9634975 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 9-444
Cow position: chrX:13912855-13913292 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 9-444
Cow position: chrX:31443045-31442622 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 10-331
Cow position: chrX:6278729-6278396 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 8

Conread position: 10-393
Cow position: chrX:6265809-6265438 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 223, 8

Conread position: 10-431
Cow position: chrX:21064063-21064486 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 121, 8

Conread position: 10-443
Cow position: chrX:1616271-1615842 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 8

Conread position: 10-444
Cow position: chrX:41673880-41674314 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 60, 8

Conread position: 10-448
Cow position: chrX:40035673-40035216 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 10-457
Cow position: chrX:6488363-6488792 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 8

Conread position: 10-469
Cow position: chrX:13177688-13177245 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 8

Conread position: 11-389
Cow position: chrX:32623360-32623731 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 86, 7

Conread position: 12-360
Cow position: chrX:37574635-37574971 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 6

Conread position: 13-207
Cow position: chrX:46430081-46429887 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 41

Conread position: 13-214
Cow position: chrX:19019332-19019126 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 80, 5

Conread position: 13-276
Cow position: chrX:42461966-42461697 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 5

Conread position: 13-378
Cow position: chrX:1503119-1503476 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 118, 5

Conread position: 13-380
Cow position: chrX:23091661-23092021 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 118, 5

Conread position: 13-443
Cow position: chrX:46073042-46072614 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 74, 5

Conread position: 13-444
Cow position: chrX:36283125-36283557 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 5

Conread position: 16-444
Cow position: chrX:46587597-46588037 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 38

Conread position: 17-215
Cow position: chrX:44063935-44063739 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 32

Conread position: 19-444
Cow position: chrX:12980046-12979618 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 20-225
Cow position: chrX:35284408-35284611 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 33

Conread position: 20-234
Cow position: chrX:11674850-11675064 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 6

Conread position: 20-235
Cow position: chrX:20792032-20791816 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 6

Conread position: 20-237
Cow position: chrX:28836118-28835903 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 21

Conread position: 20-245
Cow position: chrX:45015371-45015592 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 33

Conread position: 20-246
Cow position: chrX:8070914-8070682 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 6

Conread position: 20-329
Cow position: chrX:39126124-39126426 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 111, 6

Conread position: 20-338
Cow position: chrX:20801565-20801878 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 6

Conread position: 20-341
Cow position: chrX:41733402-41733087 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 155, 6

Conread position: 20-341
Cow position: chrX:44737206-44736888 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 12

Conread position: 20-381
Cow position: chrX:4044064-4043720 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 16

Conread position: 20-388
Cow position: chrX:14599315-14599690 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 85, 6

Conread position: 20-418
Cow position: chrX:34532313-34532709 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 32

Conread position: 20-444
Cow position: chrX:16541890-16541439 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 298
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 16

Conread position: 20-444
Cow position: chrX:34554512-34554941 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 6

Conread position: 20-444
Cow position: chrX:37489516-37489946 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 111, 6

Conread position: 20-448
Cow position: chrX:20677150-20677590 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 6

Conread position: 20-459
Cow position: chrX:11633464-11633914 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 20-459
Cow position: chrX:29602047-29601597 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 21-341
Cow position: chrX:10959616-10959283 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 33

Conread position: 22-417
Cow position: chrX:47046733-47046323 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 270
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 31

Conread position: 22-442
Cow position: chrX:45110442-45110866 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 31

Conread position: 22-444
Cow position: chrX:33466401-33466839 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 10

Conread position: 22-458
Cow position: chrX:14973948-14973524 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 31

Conread position: 22-469
Cow position: chrX:27174782-27175241 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 30

Conread position: 24-444
Cow position: chrX:7695548-7695980 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 28

Conread position: 25-195
Cow position: chrX:16324174-16324003 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 28

Conread position: 25-230
Cow position: chrX:13265830-13265629 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 25-232
Cow position: chrX:41403762-41403976 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 29

Conread position: 25-232
Cow position: chrX:41410310-41410524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 29

Conread position: 25-246
Cow position: chrX:39704490-39704709 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 120, 29

Conread position: 25-272
Cow position: chrX:26940702-26940461 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 28

Conread position: 25-322
Cow position: chrX:35258942-35258638 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 36

Conread position: 25-323
Cow position: chrX:47144877-47145179 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 28

Conread position: 25-341
Cow position: chrX:37910242-37910557 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 202, 28

Conread position: 25-341
Cow position: chrX:48652937-48652609 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 28

Conread position: 25-394
Cow position: chrX:24424598-24424237 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 25-444
Cow position: chrX:3579736-3580162 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 11

Conread position: 25-444
Cow position: chrX:13191754-13191349 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 110, 28

Conread position: 25-444
Cow position: chrX:28013650-28013223 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 28

Conread position: 25-444
Cow position: chrX:29542429-29542011 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 26-237
Cow position: chrX:47453917-47454133 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 27

Conread position: 26-302
Cow position: chrX:6234658-6234376 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 105, 27

Conread position: 26-314
Cow position: chrX:42507856-42507563 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 85, 27

Conread position: 26-322
Cow position: chrX:40481081-40480779 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 17

Conread position: 26-382
Cow position: chrX:45845886-45846255 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 27

Conread position: 26-420
Cow position: chrX:6413837-6414231 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 26-436
Cow position: chrX:30338133-30337745 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 349, 26

Conread position: 26-442
Cow position: chrX:9425951-9425547 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 27

Conread position: 26-444
Cow position: chrX:38852988-38853428 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 27-235
Cow position: chrX:20752051-20752256 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 26

Conread position: 27-236
Cow position: chrX:18195733-18195934 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 27

Conread position: 27-260
Cow position: chrX:21665802-21665568 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 26

Conread position: 27-331
Cow position: chrX:7497035-7497344 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 26

Conread position: 27-379
Cow position: chrX:30543495-30543134 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 20

Conread position: 27-389
Cow position: chrX:31373365-31373695 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 218, 26

Conread position: 27-420
Cow position: chrX:34663052-34662653 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 26

Conread position: 27-444
Cow position: chrX:24366040-24365605 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 296
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 82, 16

Conread position: 27-444
Cow position: chrX:42492723-42492304 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 27-447
Cow position: chrX:13868485-13868924 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 293
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 104, 26

Conread position: 27-458
Cow position: chrX:45598812-45598377 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 276
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 70, 33

Conread position: 27-468
Cow position: chrX:34411631-34412090 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 28-225
Cow position: chrX:26285772-26285970 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 28

Conread position: 28-227
Cow position: chrX:43408790-43408999 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 24

Conread position: 28-379
Cow position: chrX:4826035-4825686 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 25

Conread position: 28-441
Cow position: chrX:35273144-35273586 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 151

Conread position: 28-443
Cow position: chrX:10831704-10831265 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 28-449
Cow position: chrX:32420011-32420434 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 25

Conread position: 28-471
Cow position: chrX:35224093-35224522 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 8

Conread position: 29-276
Cow position: chrX:36961428-36961688 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 25

Conread position: 29-331
Cow position: chrX:45993006-45993332 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 112

Conread position: 29-423
Cow position: chrX:16996300-16996689 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 102, 25

Conread position: 29-443
Cow position: chrX:841952-842371 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 24

Conread position: 29-444
Cow position: chrX:41526730-41526317 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 29-468
Cow position: chrX:31729249-31729678 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 62

Conread position: 30-192
Cow position: chrX:29770384-29770215 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 23

Conread position: 30-367
Cow position: chrX:29120851-29121185 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 196, 24

Conread position: 30-396
Cow position: chrX:27772165-27771802 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 22

Conread position: 30-468
Cow position: chrX:39938728-39938297 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 290
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 23

Conread position: 32-234
Cow position: chrX:17908487-17908288 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 70, 21

Conread position: 32-331
Cow position: chrX:31340501-31340812 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 13

Conread position: 32-444
Cow position: chrX:10252385-10251985 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 23

Conread position: 32-459
Cow position: chrX:29545083-29544654 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 21

Conread position: 33-262
Cow position: chrX:30833047-30832819 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 7

Conread position: 33-310
Cow position: chrX:37540921-37541198 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 21

Conread position: 34-341
Cow position: chrX:47301105-47300791 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 19

Conread position: 34-341
Cow position: chrX:47303081-47302765 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 26

Conread position: 36-459
Cow position: chrX:38218507-38218945 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 118

Conread position: 36-461
Cow position: chrX:161221-161641 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 108, 56

Conread position: 39-270
Cow position: chrX:4091451-4091681 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 14

Conread position: 39-341
Cow position: chrX:45148978-45149280 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 17

Conread position: 39-442
Cow position: chrX:37781314-37780897 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 39-456
Cow position: chrX:1176179-1175760 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 14

Conread position: 39-458
Cow position: chrX:1499473-1499885 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 39-458
Cow position: chrX:7277723-7278139 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 14

Conread position: 39-465
Cow position: chrX:33000707-33001135 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 40-431
Cow position: chrX:47484467-47484058 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 13

Conread position: 43-212
Cow position: chrX:45874806-45874977 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 10

Conread position: 43-237
Cow position: chrX:8991695-8991888 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 11

Conread position: 44-388
Cow position: chrX:43730406-43730064 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 182, 9

Conread position: 45-355
Cow position: chrX:7161880-7162182 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 15

Conread position: 46-394
Cow position: chrX:10394286-10393946 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 223
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 38

Conread position: 47-448
Cow position: chrX:32820840-32821261 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 18

Conread position: 48-454
Cow position: chrX:35383208-35382813 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 136

Conread position: 49-208
Cow position: chrX:24149452-24149615 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 49-253
Cow position: chrX:18999701-18999905 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 186

Conread position: 49-322
Cow position: chrX:3489072-3488798 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 177, 64

Conread position: 49-341
Cow position: chrX:23785466-23785758 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 171

Conread position: 49-349
Cow position: chrX:47362799-47362503 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 121

Conread position: 49-381
Cow position: chrX:31311838-31312182 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 49-388
Cow position: chrX:42235721-42235365 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 219

Conread position: 49-469
Cow position: chrX:44657152-44656714 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 274
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 349

Conread position: 50-228
Cow position: chrX:31256681-31256860 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 84, 68

Conread position: 53-225
Cow position: chrX:1505529-1505700 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 78, 17

Conread position: 53-322
Cow position: chrX:40809503-40809786 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 53-389
Cow position: chrX:36067836-36068178 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 44

Conread position: 53-444
Cow position: chrX:8869592-8869187 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 54-246
Cow position: chrX:45759215-45759404 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 55

Conread position: 55-446
Cow position: chrX:7336645-7337066 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 255
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 342

Conread position: 58-442
Cow position: chrX:47186499-47186111 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 70, 134

Conread position: 59-226
Cow position: chrX:16514442-16514272 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 121

Conread position: 59-302
Cow position: chrX:13785535-13785287 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 72, 33

Conread position: 59-417
Cow position: chrX:31252240-31252598 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 185

Conread position: 59-431
Cow position: chrX:36060974-36061363 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 290

Conread position: 60-339
Cow position: chrX:47166061-47165776 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 24

Conread position: 61-233
Cow position: chrX:30005093-30005265 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 61-322
Cow position: chrX:23341143-23340877 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 132

Conread position: 61-423
Cow position: chrX:169701-169345 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 52

Conread position: 61-442
Cow position: chrX:4279290-4278904 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 111

Conread position: 61-444
Cow position: chrX:18485619-18486020 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 114

Conread position: 61-444
Cow position: chrX:27145447-27145816 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 148

Conread position: 63-385
Cow position: chrX:22387421-22387094 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 230

Conread position: 63-442
Cow position: chrX:35885903-35885517 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 149

Conread position: 64-447
Cow position: chrX:6407376-6407764 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 67

Conread position: 65-444
Cow position: chrX:4398954-4399335 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 114

Conread position: 65-444
Cow position: chrX:34792482-34792106 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 66-444
Cow position: chrX:22921143-22921538 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 19

Conread position: 68-265
Cow position: chrX:14003814-14003610 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 170

Conread position: 72-329
Cow position: chrX:30263088-30263358 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 72-426
Cow position: chrX:14275900-14275549 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 25, 17

Conread position: 73-444
Cow position: chrX:27206636-27207011 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 35

Conread position: 80-443
Cow position: chrX:27227967-27228345 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 82-444
Cow position: chrX:36355961-36356321 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 101

Conread position: 86-444
Cow position: chrX:42855309-42855680 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 142, 42

Conread position: 87-319
Cow position: chrX:12405535-12405291 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 5

Conread position: 87-388
Cow position: chrX:29680409-29680102 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 279

Conread position: 87-444
Cow position: chrX:15231802-15231442 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 5

Conread position: 87-444
Cow position: chrX:21986441-21986084 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 87-444
Cow position: chrX:25207991-25207644 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 5

Conread position: 87-468
Cow position: chrX:20584174-20584550 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 88-368
Cow position: chrX:9365822-9365537 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 25

Conread position: 91-444
Cow position: chrX:29723596-29723968 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 204

Conread position: 92-226
Cow position: chrX:10366370-10366234 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 92-316
Cow position: chrX:48385504-48385276 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 182

Conread position: 92-323
Cow position: chrX:42873249-42873476 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 5

Conread position: 92-372
Cow position: chrX:38066594-38066311 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 104

Conread position: 92-388
Cow position: chrX:11085201-11084905 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 119

Conread position: 92-395
Cow position: chrX:46433342-46433655 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 253

Conread position: 92-441
Cow position: chrX:34313889-34314235 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 41

Conread position: 92-442
Cow position: chrX:5118646-5118283 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 113

Conread position: 92-444
Cow position: chrX:8917252-8917612 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 45, 281

Conread position: 92-444
Cow position: chrX:35822198-35822548 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 99

Conread position: 92-448
Cow position: chrX:47280076-47279715 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 189

Conread position: 92-459
Cow position: chrX:14955909-14955536 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 122

Conread position: 92-482
Cow position: chrX:5919352-5919752 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 93-408
Cow position: chrX:11614556-11614866 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 202

Conread position: 95-341
Cow position: chrX:21566261-21566519 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 96-324
Cow position: chrX:27685107-27685344 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 97-388
Cow position: chrX:616401-616100 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 97-423
Cow position: chrX:18204602-18204267 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 123

Conread position: 99-444
Cow position: chrX:41027020-41027377 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 51

Conread position: 101-381
Cow position: chrX:7710678-7710381 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 101-387
Cow position: chrX:37986098-37986380 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 73

Conread position: 101-441
Cow position: chrX:41870938-41871271 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 71

Conread position: 102-444
Cow position: chrX:34315396-34315744 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 26

Conread position: 104-458
Cow position: chrX:40685463-40685098 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 105-440
Cow position: chrX:45976789-45977137 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 328

Conread position: 105-448
Cow position: chrX:34505178-34504832 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 77

Conread position: 106-444
Cow position: chrX:43115021-43115366 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 106-444
Cow position: chrX:45875261-45875607 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 255

Conread position: 107-380
Cow position: chrX:38728608-38728886 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 152

Conread position: 110-310
Cow position: chrX:19003174-19003374 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 177

Conread position: 113-431
Cow position: chrX:27946182-27945849 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 277

Conread position: 113-444
Cow position: chrX:18111267-18111596 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 37

Conread position: 114-444
Cow position: chrX:40320283-40320624 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 88

Conread position: 116-458
Cow position: chrX:26881688-26881331 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 310

Conread position: 118-418
Cow position: chrX:4515571-4515879 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 98, 12

Conread position: 120-448
Cow position: chrX:46291023-46291362 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 91

Conread position: 120-468
Cow position: chrX:24331662-24332016 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 99

Conread position: 122-458
Cow position: chrX:42927933-42927599 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 113

Conread position: 124-444
Cow position: chrX:17949602-17949275 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 16, 122

Conread position: 128-362
Cow position: chrX:11851774-11851546 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 165, 5

Conread position: 130-444
Cow position: chrX:4403210-4403535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 58

Conread position: 130-469
Cow position: chrX:33539061-33539391 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 206

Conread position: 131-396
Cow position: chrX:29194131-29194398 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 52

Conread position: 132-478
Cow position: chrX:29229908-29230261 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 86

Conread position: 133-444
Cow position: chrX:21327802-21328131 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 154

Conread position: 135-444
Cow position: chrX:10516157-10516471 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 38

Conread position: 136-448
Cow position: chrX:34837152-34836851 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 137-444
Cow position: chrX:20168461-20168772 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 218

Conread position: 138-430
Cow position: chrX:40283029-40283326 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 138

Conread position: 138-444
Cow position: chrX:12095870-12095554 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 202

Conread position: 139-444
Cow position: chrX:38560462-38560767 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 75

Conread position: 140-458
Cow position: chrX:47345240-47345561 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 86

Conread position: 142-459
Cow position: chrX:33654933-33654612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 79

Conread position: 143-423
Cow position: chrX:918818-918530 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 118

Conread position: 143-444
Cow position: chrX:29050156-29050459 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 154

Conread position: 143-459
Cow position: chrX:4296910-4296593 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 89, 74

Conread position: 148-442
Cow position: chrX:40680525-40680830 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 148-444
Cow position: chrX:6559531-6559239 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 86, 195

Conread position: 152-382
Cow position: chrX:5135607-5135366 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 216

Conread position: 152-443
Cow position: chrX:41192626-41192905 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 42

Conread position: 153-389
Cow position: chrX:4746322-4746089 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 104

Conread position: 154-444
Cow position: chrX:22115397-22115097 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 102

Conread position: 157-386
Cow position: chrX:23562558-23562788 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 43

Conread position: 157-408
Cow position: chrX:16575046-16575294 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 195, 59

Conread position: 157-444
Cow position: chrX:27261111-27261407 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 22

Conread position: 157-454
Cow position: chrX:39220003-39220317 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 32

Conread position: 157-464
Cow position: chrX:4153112-4152805 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 222

Conread position: 160-356
Cow position: chrX:18273132-18272930 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 138

Conread position: 166-336
Cow position: chrX:41111653-41111823 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 137

Conread position: 166-444
Cow position: chrX:7648469-7648195 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 171, 54

Conread position: 169-368
Cow position: chrX:46429885-46429680 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 11, 6

Conread position: 173-443
Cow position: chrX:20957187-20957455 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 57

Conread position: 173-444
Cow position: chrX:4109129-4109402 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 210, 81

Conread position: 174-448
Cow position: chrX:27511367-27511642 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 175

Conread position: 177-469
Cow position: chrX:19469563-19469274 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 185

Conread position: 178-389
Cow position: chrX:32978133-32977927 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 108

Conread position: 179-444
Cow position: chrX:5134420-5134691 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 80

Conread position: 180-487
Cow position: chrX:35985764-35986088 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 52, 108

Conread position: 181-355
Cow position: chrX:25328659-25328490 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 185-469
Cow position: chrX:22393035-22392748 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 204

Conread position: 189-444
Cow position: chrX:27306407-27306656 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 188

Conread position: 190-444
Cow position: chrX:6599828-6599557 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 190-468
Cow position: chrX:2523722-2523462 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 149

Conread position: 191-444
Cow position: chrX:11326143-11325891 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 150

Conread position: 194-444
Cow position: chrX:47061354-47061603 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 170

Conread position: 197-440
Cow position: chrX:19394515-19394768 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 202-389
Cow position: chrX:40532076-40531882 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 202-468
Cow position: chrX:17956663-17956932 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 72

Conread position: 203-444
Cow position: chrX:4289408-4289651 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 196

Conread position: 205-449
Cow position: chrX:32208840-32208605 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 208-442
Cow position: chrX:28940219-28940459 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 217-444
Cow position: chrX:16984629-16984852 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 218-444
Cow position: chrX:3806674-3806895 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 219-444
Cow position: chrX:38587853-38587628 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 208

Conread position: 219-468
Cow position: chrX:42893915-42894165 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 13

Conread position: 221-444
Cow position: chrX:12972673-12972895 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 147

Conread position: 221-444
Cow position: chrX:16836294-16836077 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 224-444
Cow position: chrX:2935952-2936170 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 141, 0

Conread position: 224-476
Cow position: chrX:23335977-23335726 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 145, 56

Conread position: 225-458
Cow position: chrX:27075055-27074818 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 154, 0

Conread position: 226-444
Cow position: chrX:39290356-39290572 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 157, 117

Conread position: 227-444
Cow position: chrX:42479831-42480044 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 195, 146

Conread position: 231-443
Cow position: chrX:17524382-17524167 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 52

Conread position: 232-377
Cow position: chrX:29501878-29501737 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 232-458
Cow position: chrX:24633687-24633928 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 233-446
Cow position: chrX:27668954-27668743 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 0

Conread position: 233-448
Cow position: chrX:32943072-32942854 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 133, 124

Conread position: 234-444
Cow position: chrX:42450009-42449796 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 99

Conread position: 234-458
Cow position: chrX:1122538-1122315 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 132, 49

Conread position: 239-458
Cow position: chrX:38301819-38302045 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 240-446
Cow position: chrX:29467767-29467563 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 125, 0

Conread position: 241-444
Cow position: chrX:32910116-32910314 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 144, 83

Conread position: 244-436
Cow position: chrX:46068744-46068554 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 245-449
Cow position: chrX:31479987-31480188 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 107, 60

Conread position: 254-444
Cow position: chrX:32866900-32867087 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 130

Conread position: 261-424
Cow position: chrX:29688143-29687978 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 82

Conread position: 261-444
Cow position: chrX:23359079-23358900 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 261-444
Cow position: chrX:41858849-41858667 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 104, 8

Conread position: 261-458
Cow position: chrX:8326936-8327137 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 261-459
Cow position: chrX:20583698-20583900 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 104

Conread position: 261-470
Cow position: chrX:5026288-5026498 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 109

Conread position: 262-444
Cow position: chrX:41453335-41453516 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 134

Conread position: 264-443
Cow position: chrX:34991399-34991577 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 266-444
Cow position: chrX:6480559-6480378 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 271-444
Cow position: chrX:23471824-23471651 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 281-458
Cow position: chrX:42875264-42875442 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 167, 89

Conread position: 283-468
Cow position: chrX:11529396-11529577 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 88

Conread position: 285-444
Cow position: chrX:31983529-31983361 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 286-469
Cow position: chrX:17525810-17525638 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 288-444
Cow position: chrX:29682052-29681901 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 288-458
Cow position: chrX:4750273-4750105 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 160, 53

Conread position: 292-444
Cow position: chrX:40556396-40556246 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 101

Conread position: 292-444
Cow position: chrX:41215385-41215540 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 292-456
Cow position: chrX:6640490-6640654 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 51

Conread position: 292-460
Cow position: chrX:42760315-42760488 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 41

Conread position: 292-473
Cow position: chrX:39642559-39642382 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 37

Conread position: 295-444
Cow position: chrX:14135744-14135892 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 299-477
Cow position: chrX:4486954-4486775 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 170

Conread position: 302-444
Cow position: chrX:31279851-31279710 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.