Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002B16.3 |
| Conread position: | 512-658 |
| Cow position: | chr11:44623516-44623667 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 512-672 |
| Cow position: | chr11:81452219-81452050 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 515-651 |
| Cow position: | chr11:16316566-16316707 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 515-677 |
| Cow position: | chr11:5567559-5567393 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 515-688 |
| Cow position: | chr11:69123353-69123179 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 517-624 |
| Cow position: | chr11:35585662-35585765 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 517-662 |
| Cow position: | chr11:62996709-62996861 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 517-672 |
| Cow position: | chr11:7596476-7596319 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 517-672 |
| Cow position: | chr11:53614877-53615031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 517-672 |
| Cow position: | chr11:62199693-62199852 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 517-675 |
| Cow position: | chr11:31862744-31862905 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-676 |
| Cow position: | chr11:7266991-7266828 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 517-677 |
| Cow position: | chr11:61203950-61204112 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 517-679 |
| Cow position: | chr11:2482100-2481931 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 517-679 |
| Cow position: | chr11:2882773-2882607 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 517-679 |
| Cow position: | chr11:78862795-78862630 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 517-688 |
| Cow position: | chr11:35806338-35806160 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 517-689 |
| Cow position: | chr11:41737880-41737704 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 517-689 |
| Cow position: | chr11:70633796-70633965 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 517-702 |
| Cow position: | chr11:6361041-6361230 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 517-714 |
| Cow position: | chr11:14063917-14064114 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 521-678 |
| Cow position: | chr11:48068979-48068812 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 45 |
| Conread position: | 523-657 |
| Cow position: | chr11:71810308-71810449 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 527-676 |
| Cow position: | chr11:63439810-63439966 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 531-676 |
| Cow position: | chr11:52118254-52118101 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 554-676 |
| Cow position: | chr11:32268445-32268573 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 19 |
Show alignments to all cow chromosomes.