Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002B16.3
        

               Conread position:
               517-637
               

               Cow position:
               chr24:16201278-16201406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               517-658
               

               Cow position:
               chr24:45200943-45201087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               517-662
               

               Cow position:
               chr24:40111628-40111782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               517-680
               

               Cow position:
               chr24:42616384-42616554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               517-689
               

               Cow position:
               chr24:17759371-17759544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               520-689
               

               Cow position:
               chr24:19480926-19480753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               537-673
               

               Cow position:
               chr24:26939706-26939563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 36
               
Show alignments to all cow chromosomes.