Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002B16.3
        

               Conread position:
               515-662
               

               Cow position:
               chr25:1264761-1264911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               515-679
               

               Cow position:
               chr25:9101339-9101502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               517-657
               

               Cow position:
               chr25:16918119-16917971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               517-662
               

               Cow position:
               chr25:17886123-17885971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               517-665
               

               Cow position:
               chr25:14018308-14018465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               517-672
               

               Cow position:
               chr25:35053880-35053721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               517-675
               

               Cow position:
               chr25:24334867-24335033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               517-679
               

               Cow position:
               chr25:22244546-22244718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               517-717
               

               Cow position:
               chr25:7299029-7298822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               72, 145
               

               Conread position:
               518-662
               

               Cow position:
               chr25:2412197-2412047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               520-661
               

               Cow position:
               chr25:36766015-36766163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               520-679
               

               Cow position:
               chr25:6133731-6133565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 147
               
Show alignments to all cow chromosomes.