Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002B16.3 |
| Conread position: | 512-671 |
| Cow position: | chr3:40195474-40195309 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 512-707 |
| Cow position: | chr3:34492458-34492265 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 515-669 |
| Cow position: | chr3:26321473-26321634 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 517-624 |
| Cow position: | chr3:34393802-34393693 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 517-653 |
| Cow position: | chr3:67686401-67686541 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-654 |
| Cow position: | chr3:19077123-19076980 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-655 |
| Cow position: | chr3:2588245-2588099 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 517-657 |
| Cow position: | chr3:2448986-2449132 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 517-657 |
| Cow position: | chr3:45866828-45866684 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 517-662 |
| Cow position: | chr3:20363684-20363532 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 517-662 |
| Cow position: | chr3:50583611-50583758 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 517-662 |
| Cow position: | chr3:61987831-61987685 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 517-664 |
| Cow position: | chr3:19079436-19079589 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 517-670 |
| Cow position: | chr3:32105575-32105418 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-672 |
| Cow position: | chr3:17724721-17724880 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 517-672 |
| Cow position: | chr3:53068783-53068939 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 517-675 |
| Cow position: | chr3:55227746-55227583 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 517-677 |
| Cow position: | chr3:29999278-29999441 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 517-679 |
| Cow position: | chr3:58852364-58852543 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 517-684 |
| Cow position: | chr3:57147499-57147672 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 517-687 |
| Cow position: | chr3:54478349-54478174 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 517-689 |
| Cow position: | chr3:34393644-34393461 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 517-715 |
| Cow position: | chr3:60089833-60090038 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 519-732 |
| Cow position: | chr3:34208963-34208751 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 520-657 |
| Cow position: | chr3:35998830-35998975 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 522-676 |
| Cow position: | chr3:15927949-15927787 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 531-662 |
| Cow position: | chr3:83965300-83965162 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 42 |
Show alignments to all cow chromosomes.