Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002B16.3 |
| Conread position: | 515-672 |
| Cow position: | chr9:60664817-60664980 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 517-619 |
| Cow position: | chr9:45277982-45278087 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 517-653 |
| Cow position: | chr9:34085266-34085405 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 517-660 |
| Cow position: | chr9:47729208-47729358 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 517-662 |
| Cow position: | chr9:47982758-47982909 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 517-672 |
| Cow position: | chr9:35268181-35268343 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-675 |
| Cow position: | chr9:59719297-59719460 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-676 |
| Cow position: | chr9:3779528-3779368 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 517-676 |
| Cow position: | chr9:4028844-4028678 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 517-676 |
| Cow position: | chr9:52512595-52512430 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 517-678 |
| Cow position: | chr9:40442210-40442375 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-678 |
| Cow position: | chr9:58583359-58583529 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 517-678 |
| Cow position: | chr9:61398163-61398326 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 517-679 |
| Cow position: | chr9:18643740-18643573 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 6 |
| Conread position: | 517-679 |
| Cow position: | chr9:49401959-49401789 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 517-679 |
| Cow position: | chr9:53277893-53278073 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 517-680 |
| Cow position: | chr9:22456976-22456812 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 517-680 |
| Cow position: | chr9:57152655-57152826 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 517-687 |
| Cow position: | chr9:10575806-10575974 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 519-657 |
| Cow position: | chr9:28624902-28624758 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 519-677 |
| Cow position: | chr9:31023280-31023441 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 519-687 |
| Cow position: | chr9:17591678-17591853 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 519-687 |
| Cow position: | chr9:54689624-54689798 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 520-666 |
| Cow position: | chr9:60781391-60781545 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.