Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 331-561 |
| Cow position: | chr14:4234111-4234334 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 374-667 |
| Cow position: | chr14:12246540-12246835 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 400-610 |
| Cow position: | chr14:11076210-11076003 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 405-580 |
| Cow position: | chr14:18439137-18439313 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 409-667 |
| Cow position: | chr14:2343545-2343802 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 166, 30 |
| Conread position: | 420-664 |
| Cow position: | chr14:20887645-20887394 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 423-667 |
| Cow position: | chr14:18579089-18579340 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 150, 30 |
| Conread position: | 426-667 |
| Cow position: | chr14:16517691-16517447 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 427-604 |
| Cow position: | chr14:33534555-33534380 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 148, 32 |
| Conread position: | 427-647 |
| Cow position: | chr14:7115746-7115967 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 427-653 |
| Cow position: | chr14:50468812-50468581 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 140, 17 |
| Conread position: | 427-667 |
| Cow position: | chr14:23148677-23148921 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 432-655 |
| Cow position: | chr14:17394596-17394830 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 432-667 |
| Cow position: | chr14:10082084-10081843 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 143, 134 |
| Conread position: | 432-668 |
| Cow position: | chr14:7149486-7149247 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 141, 68 |
| Conread position: | 432-668 |
| Cow position: | chr14:26257679-26257442 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 433-640 |
| Cow position: | chr14:45733778-45733986 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 433-657 |
| Cow position: | chr14:45594401-45594632 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 433-667 |
| Cow position: | chr14:15756925-15756685 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 433-667 |
| Cow position: | chr14:19838459-19838698 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 433-667 |
| Cow position: | chr14:47013814-47013574 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 433-668 |
| Cow position: | chr14:26260862-26260626 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 435-663 |
| Cow position: | chr14:26040508-26040740 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 26 |
| Conread position: | 435-736 |
| Cow position: | chr14:38359708-38359390 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 33 |
| Conread position: | 448-667 |
| Cow position: | chr14:5357103-5356877 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 451-646 |
| Cow position: | chr14:47152011-47151814 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 5 |
| Conread position: | 452-667 |
| Cow position: | chr14:1858276-1858053 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 467-661 |
| Cow position: | chr14:13153436-13153231 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 480-663 |
| Cow position: | chr14:5569881-5570070 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 182 |
| Conread position: | 492-668 |
| Cow position: | chr14:45779995-45780174 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 500-718 |
| Cow position: | chr14:11104361-11104596 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 66 |
Show alignments to all cow chromosomes.