Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 374-666 |
| Cow position: | chr15:11677068-11676772 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 374-666 |
| Cow position: | chr15:26304773-26304488 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 374-667 |
| Cow position: | chr15:22336730-22337044 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 393-610 |
| Cow position: | chr15:34436580-34436356 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 394-667 |
| Cow position: | chr15:16444466-16444740 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 419-667 |
| Cow position: | chr15:28977460-28977212 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 421-667 |
| Cow position: | chr15:9369783-9370031 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 426-668 |
| Cow position: | chr15:42382099-42381838 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 426-722 |
| Cow position: | chr15:30945487-30945179 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 428-641 |
| Cow position: | chr15:30559691-30559909 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 430-647 |
| Cow position: | chr15:6654045-6653826 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 145, 137 |
| Conread position: | 433-667 |
| Cow position: | chr15:44902375-44902611 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 142, 134 |
| Conread position: | 439-667 |
| Cow position: | chr15:26133556-26133790 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 137, 43 |
| Conread position: | 440-667 |
| Cow position: | chr15:11730401-11730176 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 38 |
| Conread position: | 442-665 |
| Cow position: | chr15:5001002-5000789 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 442-665 |
| Cow position: | chr15:39568727-39568962 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 126 |
| Conread position: | 444-666 |
| Cow position: | chr15:433056-433283 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 9, 155 |
| Conread position: | 456-653 |
| Cow position: | chr15:22092997-22093192 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 458-663 |
| Cow position: | chr15:14219257-14219045 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 467-653 |
| Cow position: | chr15:8284640-8284825 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 100 |
| Conread position: | 468-657 |
| Cow position: | chr15:4332522-4332714 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 503-714 |
| Cow position: | chr15:23281493-23281269 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 64 |
Show alignments to all cow chromosomes.