Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 374-653 |
| Cow position: | chr17:3829689-3829974 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 374-667 |
| Cow position: | chr17:6202734-6203027 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 392-668 |
| Cow position: | chr17:27865227-27865508 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 392-734 |
| Cow position: | chr17:22808815-22808461 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 403-647 |
| Cow position: | chr17:25503892-25504138 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 425-646 |
| Cow position: | chr17:21840074-21840296 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 150, 141 |
| Conread position: | 426-644 |
| Cow position: | chr17:21851328-21851107 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 141 |
| Conread position: | 426-663 |
| Cow position: | chr17:21898334-21898581 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 427-647 |
| Cow position: | chr17:35251604-35251380 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 215 |
| Conread position: | 427-667 |
| Cow position: | chr17:22470332-22470086 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 431-664 |
| Cow position: | chr17:9086292-9086530 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 144, 115 |
| Conread position: | 432-667 |
| Cow position: | chr17:3836461-3836709 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 432-667 |
| Cow position: | chr17:33985458-33985218 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 135 |
| Conread position: | 433-667 |
| Cow position: | chr17:36038730-36038971 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 440-662 |
| Cow position: | chr17:8303581-8303801 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 452-608 |
| Cow position: | chr17:24995444-24995286 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 116 |
| Conread position: | 453-667 |
| Cow position: | chr17:22463910-22463695 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 141 |
| Conread position: | 453-667 |
| Cow position: | chr17:23783871-23783653 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 456-666 |
| Cow position: | chr17:27593196-27593413 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 461-743 |
| Cow position: | chr17:45883584-45883890 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 468-667 |
| Cow position: | chr17:26654546-26654748 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 485-667 |
| Cow position: | chr17:21905357-21905171 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 16 |
Show alignments to all cow chromosomes.