Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 374-663 |
| Cow position: | chr2:81130211-81129920 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 392-744 |
| Cow position: | chr2:70177697-70178062 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 178 |
| Conread position: | 394-667 |
| Cow position: | chr2:46490459-46490181 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 398-668 |
| Cow position: | chr2:856818-856548 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 402-666 |
| Cow position: | chr2:71461607-71461873 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 403-573 |
| Cow position: | chr2:23648391-23648223 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 419-665 |
| Cow position: | chr2:55407401-55407162 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 221, 59 |
| Conread position: | 423-640 |
| Cow position: | chr2:74308273-74308064 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 423-667 |
| Cow position: | chr2:73751106-73750855 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 426-653 |
| Cow position: | chr2:74694879-74694645 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 426-665 |
| Cow position: | chr2:21755399-21755164 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 427-629 |
| Cow position: | chr2:12855000-12854795 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 427-662 |
| Cow position: | chr2:19063441-19063678 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 427-666 |
| Cow position: | chr2:46258231-46258481 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 428-644 |
| Cow position: | chr2:74811103-74811325 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 428-667 |
| Cow position: | chr2:19150119-19150361 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 432-667 |
| Cow position: | chr2:15339687-15339449 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 143, 121 |
| Conread position: | 432-667 |
| Cow position: | chr2:29450727-29450484 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 432-667 |
| Cow position: | chr2:42190740-42190979 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 432-668 |
| Cow position: | chr2:69640812-69641044 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 167 |
| Conread position: | 433-663 |
| Cow position: | chr2:49862286-49862051 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 433-663 |
| Cow position: | chr2:74482370-74482134 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 433-667 |
| Cow position: | chr2:13332372-13332132 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 440-664 |
| Cow position: | chr2:69924086-69924315 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 195 |
| Conread position: | 443-667 |
| Cow position: | chr2:59163683-59163912 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 105 |
| Conread position: | 444-667 |
| Cow position: | chr2:45113863-45113636 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 446-667 |
| Cow position: | chr2:70279376-70279149 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 120, 185 |
| Conread position: | 451-643 |
| Cow position: | chr2:33512254-33512449 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 124, 115 |
| Conread position: | 455-668 |
| Cow position: | chr2:33219078-33219296 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 457-668 |
| Cow position: | chr2:5327942-5327726 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 461-653 |
| Cow position: | chr2:18088994-18088796 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 482-667 |
| Cow position: | chr2:65334680-65334487 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 487-667 |
| Cow position: | chr2:45690332-45690149 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 88, 79 |
Show alignments to all cow chromosomes.