Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 322-598 |
| Cow position: | chr22:3467035-3467321 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 205 |
| Conread position: | 369-667 |
| Cow position: | chr22:894428-894132 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 374-668 |
| Cow position: | chr22:6439060-6438766 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 193, 13 |
| Conread position: | 388-667 |
| Cow position: | chr22:2112118-2112401 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 408-667 |
| Cow position: | chr22:14447599-14447338 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 159, 11 |
| Conread position: | 421-652 |
| Cow position: | chr22:23071368-23071127 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 10, 149 |
| Conread position: | 423-657 |
| Cow position: | chr22:2013433-2013671 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 423-667 |
| Cow position: | chr22:7211244-7211003 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 423-667 |
| Cow position: | chr22:20078143-20077890 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 425-667 |
| Cow position: | chr22:39648315-39648559 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 426-667 |
| Cow position: | chr22:13513427-13513182 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 148, 52 |
| Conread position: | 426-667 |
| Cow position: | chr22:25588262-25588019 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 139, 163 |
| Conread position: | 427-604 |
| Cow position: | chr22:41957864-41957687 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 432-592 |
| Cow position: | chr22:21169860-21169699 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 432-641 |
| Cow position: | chr22:23086269-23086479 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 141, 157 |
| Conread position: | 432-667 |
| Cow position: | chr22:6930617-6930376 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 439-625 |
| Cow position: | chr22:15682351-15682545 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 130 |
| Conread position: | 440-667 |
| Cow position: | chr22:21165015-21164781 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 135, 127 |
| Conread position: | 456-667 |
| Cow position: | chr22:12861329-12861120 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 29 |
| Conread position: | 456-667 |
| Cow position: | chr22:15672272-15672489 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 458-687 |
| Cow position: | chr22:32126720-32126485 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 487-667 |
| Cow position: | chr22:35460185-35460003 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 487-667 |
| Cow position: | chr22:35892947-35892761 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 508-667 |
| Cow position: | chr22:23072514-23072355 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 133, 80 |
Show alignments to all cow chromosomes.