Cow genome map

Conread name: Ss1.1-Pig3-SRG8002D01.3

Conread position: 1-744
Cow position: chr23:12980967-12980222 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 743
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 0

Conread position: 387-653
Cow position: chr23:9637159-9637430 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 27

Conread position: 394-667
Cow position: chr23:26343474-26343204 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 27

Conread position: 405-667
Cow position: chr23:12972580-12972317 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 170, 31

Conread position: 405-735
Cow position: chr23:31086062-31086399 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 146, 30

Conread position: 409-667
Cow position: chr23:19788853-19788593 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 83

Conread position: 423-647
Cow position: chr23:33993755-33993527 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 212

Conread position: 423-653
Cow position: chr23:36437258-36437494 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 100

Conread position: 423-659
Cow position: chr23:22331506-22331262 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 157, 83

Conread position: 423-667
Cow position: chr23:18568579-18568329 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 152, 132

Conread position: 424-667
Cow position: chr23:1280400-1280649 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 11

Conread position: 426-664
Cow position: chr23:19840878-19841119 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 149, 33

Conread position: 432-610
Cow position: chr23:3536313-3536135 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 145, 135

Conread position: 432-657
Cow position: chr23:7527434-7527204 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 142, 120

Conread position: 432-667
Cow position: chr23:596556-596794 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 433-653
Cow position: chr23:6303604-6303825 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 18

Conread position: 433-665
Cow position: chr23:664798-665040 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 116

Conread position: 433-667
Cow position: chr23:3202065-3202305 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 29

Conread position: 433-667
Cow position: chr23:6048626-6048385 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 35

Conread position: 434-668
Cow position: chr23:35164804-35164564 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 141, 133

Conread position: 440-667
Cow position: chr23:28882264-28882492 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 163

Conread position: 452-667
Cow position: chr23:18243745-18243969 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 107

Conread position: 453-722
Cow position: chr23:1899741-1899459 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 6, 35

Conread position: 456-663
Cow position: chr23:4651904-4652115 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 24

Conread position: 487-663
Cow position: chr23:27928-27749 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 80

Conread position: 487-664
Cow position: chr23:23877563-23877379 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 111

Conread position: 500-667
Cow position: chr23:595370-595543 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.