Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 1-744 |
| Cow position: | chr23:12980967-12980222 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 743 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 0 |
| Conread position: | 387-653 |
| Cow position: | chr23:9637159-9637430 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 394-667 |
| Cow position: | chr23:26343474-26343204 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 405-667 |
| Cow position: | chr23:12972580-12972317 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 170, 31 |
| Conread position: | 405-735 |
| Cow position: | chr23:31086062-31086399 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 409-667 |
| Cow position: | chr23:19788853-19788593 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 83 |
| Conread position: | 423-647 |
| Cow position: | chr23:33993755-33993527 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 212 |
| Conread position: | 423-653 |
| Cow position: | chr23:36437258-36437494 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 100 |
| Conread position: | 423-659 |
| Cow position: | chr23:22331506-22331262 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 157, 83 |
| Conread position: | 423-667 |
| Cow position: | chr23:18568579-18568329 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 152, 132 |
| Conread position: | 424-667 |
| Cow position: | chr23:1280400-1280649 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 151, 11 |
| Conread position: | 426-664 |
| Cow position: | chr23:19840878-19841119 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 149, 33 |
| Conread position: | 432-610 |
| Cow position: | chr23:3536313-3536135 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 145, 135 |
| Conread position: | 432-657 |
| Cow position: | chr23:7527434-7527204 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 142, 120 |
| Conread position: | 432-667 |
| Cow position: | chr23:596556-596794 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 433-653 |
| Cow position: | chr23:6303604-6303825 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 433-665 |
| Cow position: | chr23:664798-665040 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 116 |
| Conread position: | 433-667 |
| Cow position: | chr23:3202065-3202305 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 433-667 |
| Cow position: | chr23:6048626-6048385 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 434-668 |
| Cow position: | chr23:35164804-35164564 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 141, 133 |
| Conread position: | 440-667 |
| Cow position: | chr23:28882264-28882492 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 163 |
| Conread position: | 452-667 |
| Cow position: | chr23:18243745-18243969 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 107 |
| Conread position: | 453-722 |
| Cow position: | chr23:1899741-1899459 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 456-663 |
| Cow position: | chr23:4651904-4652115 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 487-663 |
| Cow position: | chr23:27928-27749 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 487-664 |
| Cow position: | chr23:23877563-23877379 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 111 |
| Conread position: | 500-667 |
| Cow position: | chr23:595370-595543 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.