Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 346-663 |
| Cow position: | chr24:235946-236267 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 374-639 |
| Cow position: | chr24:3836339-3836076 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 394-653 |
| Cow position: | chr24:3534123-3534377 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 422-647 |
| Cow position: | chr24:18401684-18401454 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 145 |
| Conread position: | 430-666 |
| Cow position: | chr24:31376822-31377059 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 431-647 |
| Cow position: | chr24:39467014-39467234 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 87 |
| Conread position: | 432-667 |
| Cow position: | chr24:263997-263753 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 432-667 |
| Cow position: | chr24:18621023-18620785 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 143, 135 |
| Conread position: | 432-668 |
| Cow position: | chr24:39464916-39465156 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 136 |
| Conread position: | 433-661 |
| Cow position: | chr24:26892259-26892024 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 444-653 |
| Cow position: | chr24:20927319-20927533 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 444-667 |
| Cow position: | chr24:155886-155652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 449-635 |
| Cow position: | chr24:27218379-27218570 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 451-667 |
| Cow position: | chr24:266210-265988 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 451-686 |
| Cow position: | chr24:30758584-30758824 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 156, 224 |
| Conread position: | 468-643 |
| Cow position: | chr24:13766839-13767018 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 482-667 |
| Cow position: | chr24:4800121-4800309 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 487-713 |
| Cow position: | chr24:39460148-39460387 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 490-661 |
| Cow position: | chr24:19734953-19735131 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.