Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 374-655 |
| Cow position: | chr29:1900428-1900700 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 374-657 |
| Cow position: | chr29:34090335-34090049 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 374-667 |
| Cow position: | chr29:11360721-11361015 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 201, 12 |
| Conread position: | 374-667 |
| Cow position: | chr29:32204185-32203886 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 394-661 |
| Cow position: | chr29:40632623-40632888 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 27 |
| Conread position: | 394-667 |
| Cow position: | chr29:30355945-30355682 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 180, 27 |
| Conread position: | 398-663 |
| Cow position: | chr29:20049895-20049626 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 174, 20 |
| Conread position: | 399-662 |
| Cow position: | chr29:23134118-23133856 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 168, 24 |
| Conread position: | 421-657 |
| Cow position: | chr29:30575688-30575925 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 423-667 |
| Cow position: | chr29:39419701-39419452 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 152, 47 |
| Conread position: | 426-667 |
| Cow position: | chr29:1761983-1761736 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 426-667 |
| Cow position: | chr29:18444781-18445020 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 162, 38 |
| Conread position: | 426-743 |
| Cow position: | chr29:25388628-25388963 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 186, 44 |
| Conread position: | 427-667 |
| Cow position: | chr29:38263155-38262912 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 427-668 |
| Cow position: | chr29:10626091-10625844 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 432-715 |
| Cow position: | chr29:24801641-24801942 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 136 |
| Conread position: | 433-611 |
| Cow position: | chr29:11973286-11973107 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 433-632 |
| Cow position: | chr29:29637719-29637515 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 433-651 |
| Cow position: | chr29:29455684-29455907 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 443-667 |
| Cow position: | chr29:13500541-13500762 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 456-667 |
| Cow position: | chr29:1446996-1447209 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 458-653 |
| Cow position: | chr29:27058426-27058231 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 144, 93 |
| Conread position: | 487-667 |
| Cow position: | chr29:6743837-6744023 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.