Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 366-668 |
| Cow position: | chr3:23178804-23178498 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 374-662 |
| Cow position: | chr3:8146667-8146964 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 374-667 |
| Cow position: | chr3:72885066-72884767 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 374-667 |
| Cow position: | chr3:79142203-79141904 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 383-667 |
| Cow position: | chr3:79067465-79067177 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 384-642 |
| Cow position: | chr3:52608562-52608825 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 389-665 |
| Cow position: | chr3:32578658-32578937 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 392-609 |
| Cow position: | chr3:28595463-28595677 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 409-667 |
| Cow position: | chr3:25695748-25695485 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 157 |
| Conread position: | 423-642 |
| Cow position: | chr3:69279744-69279971 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 426-667 |
| Cow position: | chr3:16574776-16574527 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 427-662 |
| Cow position: | chr3:11951988-11952229 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 432-657 |
| Cow position: | chr3:14184230-14184460 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 432-663 |
| Cow position: | chr3:45937167-45936934 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 157 |
| Conread position: | 433-626 |
| Cow position: | chr3:6769748-6769944 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 434-668 |
| Cow position: | chr3:14038696-14038933 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 434-669 |
| Cow position: | chr3:60788208-60787973 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 444-664 |
| Cow position: | chr3:44090471-44090695 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 167, 114 |
| Conread position: | 445-667 |
| Cow position: | chr3:81222477-81222251 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 121, 180 |
| Conread position: | 448-667 |
| Cow position: | chr3:63998362-63998137 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 128, 67 |
| Conread position: | 454-743 |
| Cow position: | chr3:75055653-75055962 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 173 |
| Conread position: | 456-667 |
| Cow position: | chr3:32246312-32246528 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 487-664 |
| Cow position: | chr3:80996546-80996727 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 144 |
| Conread position: | 487-667 |
| Cow position: | chr3:4332949-4333132 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 490-667 |
| Cow position: | chr3:45948933-45948756 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 504-663 |
| Cow position: | chr3:65535082-65534917 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 63 |
Show alignments to all cow chromosomes.