Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 366-667 |
| Cow position: | chr4:23681387-23681087 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 194, 8 |
| Conread position: | 374-667 |
| Cow position: | chr4:59265798-59265511 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 380-647 |
| Cow position: | chr4:40249812-40249544 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 391-657 |
| Cow position: | chr4:5207775-5208044 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 392-667 |
| Cow position: | chr4:45382900-45383179 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 406-667 |
| Cow position: | chr4:35070227-35070493 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 423-648 |
| Cow position: | chr4:63549093-63548863 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 423-667 |
| Cow position: | chr4:43283685-43283939 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 427-625 |
| Cow position: | chr4:38951820-38951617 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 427-668 |
| Cow position: | chr4:18797736-18797487 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 430-665 |
| Cow position: | chr4:3901648-3901892 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 432-655 |
| Cow position: | chr4:18283783-18283555 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 432-668 |
| Cow position: | chr4:29119340-29119578 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 433-652 |
| Cow position: | chr4:52516598-52516826 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 433-667 |
| Cow position: | chr4:57643869-57644104 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 440-653 |
| Cow position: | chr4:49764947-49765169 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 196 |
| Conread position: | 440-667 |
| Cow position: | chr4:33002450-33002685 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 130 |
| Conread position: | 441-667 |
| Cow position: | chr4:29232267-29232498 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 444-669 |
| Cow position: | chr4:4126027-4125799 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 445-647 |
| Cow position: | chr4:16942363-16942155 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 448-660 |
| Cow position: | chr4:30016998-30016777 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 448-667 |
| Cow position: | chr4:54377704-54377481 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 451-667 |
| Cow position: | chr4:565268-565046 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 117 |
| Conread position: | 451-743 |
| Cow position: | chr4:55648180-55647870 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 200, 116 |
| Conread position: | 452-667 |
| Cow position: | chr4:54379031-54379254 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 487-667 |
| Cow position: | chr4:25188827-25189009 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 488-651 |
| Cow position: | chr4:17094085-17093918 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 489-652 |
| Cow position: | chr4:28227518-28227351 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 489-667 |
| Cow position: | chr4:65653818-65654001 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 500-653 |
| Cow position: | chr4:32713357-32713510 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 503-667 |
| Cow position: | chr4:32773779-32773609 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 519-667 |
| Cow position: | chr4:23613009-23613159 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 519-667 |
| Cow position: | chr4:37343344-37343500 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 48 |
Show alignments to all cow chromosomes.