Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 346-667 |
| Cow position: | chr8:49987342-49987015 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 374-667 |
| Cow position: | chr8:24688460-24688165 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 392-667 |
| Cow position: | chr8:45410070-45409795 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 401-707 |
| Cow position: | chr8:811586-811905 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 407-667 |
| Cow position: | chr8:48674002-48674267 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 410-663 |
| Cow position: | chr8:12210631-12210370 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 416-687 |
| Cow position: | chr8:60001062-60000776 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 417-667 |
| Cow position: | chr8:39059630-39059885 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 420-647 |
| Cow position: | chr8:20661106-20660877 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 423-625 |
| Cow position: | chr8:48454993-48454785 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 146 |
| Conread position: | 423-667 |
| Cow position: | chr8:1649417-1649170 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 426-630 |
| Cow position: | chr8:5246715-5246923 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 97 |
| Conread position: | 426-653 |
| Cow position: | chr8:40114313-40114539 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 429-667 |
| Cow position: | chr8:25386494-25386734 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 131, 138 |
| Conread position: | 432-667 |
| Cow position: | chr8:1442845-1443084 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 432-667 |
| Cow position: | chr8:17430707-17430943 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 432-737 |
| Cow position: | chr8:25797526-25797849 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 444-667 |
| Cow position: | chr8:848494-848715 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 132, 36 |
| Conread position: | 448-667 |
| Cow position: | chr8:49882192-49881964 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 451-667 |
| Cow position: | chr8:57724562-57724344 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 125, 116 |
| Conread position: | 455-655 |
| Cow position: | chr8:49673125-49672916 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 10 |
| Conread position: | 458-667 |
| Cow position: | chr8:7004354-7004144 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 110, 144 |
| Conread position: | 467-667 |
| Cow position: | chr8:35558706-35558911 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 108, 100 |
| Conread position: | 500-667 |
| Cow position: | chr8:42640940-42640766 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 67 |
| Conread position: | 514-667 |
| Cow position: | chr8:24959384-24959542 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 53 |
Show alignments to all cow chromosomes.