Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002D01.3 |
| Conread position: | 374-667 |
| Cow position: | chr9:44560229-44559934 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 374-667 |
| Cow position: | chr9:58469538-58469827 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 202, 13 |
| Conread position: | 393-664 |
| Cow position: | chr9:6656262-6655986 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 399-667 |
| Cow position: | chr9:25032800-25032529 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 194 |
| Conread position: | 405-667 |
| Cow position: | chr9:20983883-20984153 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 408-647 |
| Cow position: | chr9:28281572-28281815 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 413-667 |
| Cow position: | chr9:48610685-48610427 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 421-667 |
| Cow position: | chr9:11418492-11418243 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 422-647 |
| Cow position: | chr9:31644269-31644038 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 423-647 |
| Cow position: | chr9:10896872-10896641 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 423-665 |
| Cow position: | chr9:7093828-7094068 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 9 |
| Conread position: | 423-667 |
| Cow position: | chr9:62925283-62925531 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 426-667 |
| Cow position: | chr9:6317292-6317045 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 429-667 |
| Cow position: | chr9:13453731-13453490 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 431-667 |
| Cow position: | chr9:6163703-6163946 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 136 |
| Conread position: | 432-668 |
| Cow position: | chr9:44718364-44718121 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 135 |
| Conread position: | 433-667 |
| Cow position: | chr9:32609431-32609194 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 444-662 |
| Cow position: | chr9:10894337-10894548 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 444-667 |
| Cow position: | chr9:55033010-55033240 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 84 |
| Conread position: | 445-648 |
| Cow position: | chr9:102375-102173 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 453-722 |
| Cow position: | chr9:40476936-40477213 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 487-667 |
| Cow position: | chr9:9562002-9561818 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 169 |
| Conread position: | 504-666 |
| Cow position: | chr9:34315051-34315218 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 517-667 |
| Cow position: | chr9:12861374-12861223 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.