Cow genome map

Conread name: Ss1.1-Pig3-SRG8002D01.3

Conread position: 348-667
Cow position: chrX:23364556-23364237 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 227, 19

Conread position: 373-667
Cow position: chrX:32568755-32568458 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 14

Conread position: 374-667
Cow position: chrX:11840978-11840686 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 49

Conread position: 374-667
Cow position: chrX:42558113-42558400 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 202, 13

Conread position: 377-667
Cow position: chrX:42066190-42066479 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 10

Conread position: 394-643
Cow position: chrX:34863547-34863305 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 28

Conread position: 400-652
Cow position: chrX:13259501-13259247 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 23

Conread position: 421-667
Cow position: chrX:31443711-31443949 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 221, 142

Conread position: 423-567
Cow position: chrX:17483124-17482981 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 423-667
Cow position: chrX:39097383-39097147 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 72

Conread position: 423-667
Cow position: chrX:42549557-42549796 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 21

Conread position: 423-667
Cow position: chrX:42915519-42915754 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 36

Conread position: 423-743
Cow position: chrX:13816667-13817014 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 147

Conread position: 425-667
Cow position: chrX:25218951-25219190 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 64

Conread position: 426-667
Cow position: chrX:44191936-44191685 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 18

Conread position: 427-667
Cow position: chrX:38739741-38739989 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 58, 22

Conread position: 430-665
Cow position: chrX:1340689-1340439 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 145

Conread position: 432-639
Cow position: chrX:31466175-31465966 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 121

Conread position: 433-639
Cow position: chrX:25442092-25441881 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 25

Conread position: 433-667
Cow position: chrX:41929838-41930078 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 141, 133

Conread position: 434-667
Cow position: chrX:29901146-29901378 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 34

Conread position: 439-665
Cow position: chrX:31909116-31908884 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 136, 116

Conread position: 440-667
Cow position: chrX:21177955-21177722 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 11

Conread position: 445-647
Cow position: chrX:21243079-21242873 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 44

Conread position: 452-647
Cow position: chrX:6815622-6815822 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 36

Conread position: 456-667
Cow position: chrX:25237065-25236861 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 113

Conread position: 456-667
Cow position: chrX:31919299-31919083 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 111, 167

Conread position: 471-666
Cow position: chrX:38139238-38139039 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 9

Conread position: 487-667
Cow position: chrX:802761-802938 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 106

Show alignments to all cow chromosomes.