Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               80-236
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 114
               

               Conread position:
               253-1050
               

               Cow position:
               
               

               Alignm length:
               835
               

               Alignm identity:
               606
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               1042-1439
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               1047-1324
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 191
               

               Conread position:
               1057-1332
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               155, 19
               

               Conread position:
               1058-1308
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 240
               

               Conread position:
               1058-1330
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 157
               

               Conread position:
               1059-1312
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               1059-1313
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1059-1314
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 133
               

               Conread position:
               1059-1320
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               1062-1308
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1065-1324
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               184, 11
               

               Conread position:
               1066-1328
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               195, 15
               

               Conread position:
               1069-1329
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               1076-1330
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 209
               

               Conread position:
               1076-1331
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 225
               

               Conread position:
               1078-1306
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               1081-1332
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               1111-1318
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               138, 15
               

               Conread position:
               1111-1324
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               140, 15
               

               Conread position:
               1111-1327
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               145, 15
               

               Conread position:
               1111-1329
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               138, 15
               

               Conread position:
               1111-1334
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               1114-1324
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               137, 5
               

               Conread position:
               1121-1324
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               124, 5
               

               Conread position:
               1125-1315
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               1125-1334
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 54
               

               Conread position:
               1126-1266
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1126-1286
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1126-1300
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               123, 45
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1126-1313
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1126-1314
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1126-1315
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               74, 176
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 168
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               123, 91
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 61
               

               Conread position:
               1126-1340
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               1126-1341
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 91
               

               Conread position:
               1126-1352
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               1127-1331
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 161
               

               Conread position:
               1127-1331
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               1129-1291
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1129-1309
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1130-1275
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1130-1306
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               118, 154
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               1130-1324
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1130-1329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               1130-1330
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 148
               

               Conread position:
               1130-1330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               1130-1331
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               1131-1306
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1131-1311
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               1131-1330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 73
               

               Conread position:
               1131-1333
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               118, 48
               

               Conread position:
               1131-1337
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1132-1345
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               1136-1315
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               1136-1318
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               1139-1308
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 32
               

               Conread position:
               1139-1308
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1140-1266
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               1140-1313
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1140-1320
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               121, 148
               

               Conread position:
               1140-1324
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               1140-1331
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1140-1331
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               111, 61
               

               Conread position:
               1140-1332
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1140-1338
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               1141-1258
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1144-1321
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1146-1337
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 149
               

               Conread position:
               1156-1312
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               1159-1330
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 159
               

               Conread position:
               1161-1308
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 142
               

               Conread position:
               1164-1310
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               1164-1324
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               1172-1332
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               1183-1337
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               148, 26
               

               Conread position:
               1191-1335
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               1191-1335
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               1193-1329
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               1198-1330
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1208-1340
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1425-1573
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               133
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.